BLASTX nr result

ID: Coptis21_contig00001787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001787
         (1952 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23263.3| unnamed protein product [Vitis vinifera]              749   0.0  
ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   749   0.0  
emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera]   749   0.0  
gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indi...   724   0.0  
ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group] g...   721   0.0  

>emb|CBI23263.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  749 bits (1935), Expect = 0.0
 Identities = 373/444 (84%), Positives = 404/444 (90%), Gaps = 3/444 (0%)
 Frame = +1

Query: 301  EDDVEIGGGKEVFVSGNDVREVKYTALSSFDEAKLPEEVLECCKGFNKPSPIQSHAWPFL 480
            EDD E  G   V V+G D +E KY A  SF E+KLP++VLECC+ F++PSPIQSHAWPFL
Sbjct: 184  EDDKESRGAC-VAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFL 242

Query: 481  LDGRDFIGIAATGSGKTLAFGVPALMHI---RRTGRKKRLNPLCLVLSPTRELAQQIADV 651
            LD RDFIGIAATGSGKTLAFGVPA+MH+   R++   K +NPLCLVLSPTRELAQQI+DV
Sbjct: 243  LDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDV 302

Query: 652  LCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGFCCLKEVSYVV 831
            LCEAGK CGV SVC+YGGTSKGPQISSLK+GVD+VIGTPGRLKDLIEMG CCL EVS+VV
Sbjct: 303  LCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVV 362

Query: 832  LDEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDPNPVKVVVGSE 1011
            LDEADRMLDMGFEPEVRSILSQTC  RQMVMFSATWP  VHQLAQEFMDPNPVKVV+GSE
Sbjct: 363  LDEADRMLDMGFEPEVRSILSQTCPARQMVMFSATWPLPVHQLAQEFMDPNPVKVVIGSE 422

Query: 1012 DLAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAARVENMLQKRG 1191
            DLAANHDVMQIVEVLDDRSRD RL+TLL KYHKSQ+NRVLVFVLYKKEAARVENMLQ+RG
Sbjct: 423  DLAANHDVMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKEAARVENMLQRRG 482

Query: 1192 WKAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVINYSFPLTTEDY 1371
            W  VS+HGDKAQ+ RT ALSLFK G CPLM+ATDVAARGLDIPDVEVVINYSFPLTTEDY
Sbjct: 483  WNVVSIHGDKAQQARTAALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDY 542

Query: 1372 VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLREAGQLVPTDLMKFGTHVKKKESKL 1551
            VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVL+EAGQ+VP DL+KFGTHVKKKESKL
Sbjct: 543  VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLKEAGQIVPADLLKFGTHVKKKESKL 602

Query: 1552 YGAHFKEISADAPKSKKITFNDSD 1623
            YGAHF+EI+ADAPKSKKITF+DSD
Sbjct: 603  YGAHFREIAADAPKSKKITFDDSD 626


>ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Vitis vinifera]
          Length = 549

 Score =  749 bits (1935), Expect = 0.0
 Identities = 373/444 (84%), Positives = 404/444 (90%), Gaps = 3/444 (0%)
 Frame = +1

Query: 301  EDDVEIGGGKEVFVSGNDVREVKYTALSSFDEAKLPEEVLECCKGFNKPSPIQSHAWPFL 480
            EDD E  G   V V+G D +E KY A  SF E+KLP++VLECC+ F++PSPIQSHAWPFL
Sbjct: 105  EDDKESRGAC-VAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFL 163

Query: 481  LDGRDFIGIAATGSGKTLAFGVPALMHI---RRTGRKKRLNPLCLVLSPTRELAQQIADV 651
            LD RDFIGIAATGSGKTLAFGVPA+MH+   R++   K +NPLCLVLSPTRELAQQI+DV
Sbjct: 164  LDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDV 223

Query: 652  LCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGFCCLKEVSYVV 831
            LCEAGK CGV SVC+YGGTSKGPQISSLK+GVD+VIGTPGRLKDLIEMG CCL EVS+VV
Sbjct: 224  LCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVV 283

Query: 832  LDEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDPNPVKVVVGSE 1011
            LDEADRMLDMGFEPEVRSILSQTC  RQMVMFSATWP  VHQLAQEFMDPNPVKVV+GSE
Sbjct: 284  LDEADRMLDMGFEPEVRSILSQTCPARQMVMFSATWPLPVHQLAQEFMDPNPVKVVIGSE 343

Query: 1012 DLAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAARVENMLQKRG 1191
            DLAANHDVMQIVEVLDDRSRD RL+TLL KYHKSQ+NRVLVFVLYKKEAARVENMLQ+RG
Sbjct: 344  DLAANHDVMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKEAARVENMLQRRG 403

Query: 1192 WKAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVINYSFPLTTEDY 1371
            W  VS+HGDKAQ+ RT ALSLFK G CPLM+ATDVAARGLDIPDVEVVINYSFPLTTEDY
Sbjct: 404  WNVVSIHGDKAQQARTAALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDY 463

Query: 1372 VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLREAGQLVPTDLMKFGTHVKKKESKL 1551
            VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVL+EAGQ+VP DL+KFGTHVKKKESKL
Sbjct: 464  VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLKEAGQIVPADLLKFGTHVKKKESKL 523

Query: 1552 YGAHFKEISADAPKSKKITFNDSD 1623
            YGAHF+EI+ADAPKSKKITF+DSD
Sbjct: 524  YGAHFREIAADAPKSKKITFDDSD 547


>emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera]
          Length = 539

 Score =  749 bits (1935), Expect = 0.0
 Identities = 373/444 (84%), Positives = 404/444 (90%), Gaps = 3/444 (0%)
 Frame = +1

Query: 301  EDDVEIGGGKEVFVSGNDVREVKYTALSSFDEAKLPEEVLECCKGFNKPSPIQSHAWPFL 480
            EDD E  G   V V+G D +E KY A  SF E+KLP++VLECC+ F++PSPIQSHAWPFL
Sbjct: 95   EDDKESRGAC-VAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFL 153

Query: 481  LDGRDFIGIAATGSGKTLAFGVPALMHI---RRTGRKKRLNPLCLVLSPTRELAQQIADV 651
            LD RDFIGIAATGSGKTLAFGVPA+MH+   R++   K +NPLCLVLSPTRELAQQI+DV
Sbjct: 154  LDHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDV 213

Query: 652  LCEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGFCCLKEVSYVV 831
            LCEAGK CGV SVC+YGGTSKGPQISSLK+GVD+VIGTPGRLKDLIEMG CCL EVS+VV
Sbjct: 214  LCEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVV 273

Query: 832  LDEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDPNPVKVVVGSE 1011
            LDEADRMLDMGFEPEVRSILSQTC  RQMVMFSATWP  VHQLAQEFMDPNPVKVV+GSE
Sbjct: 274  LDEADRMLDMGFEPEVRSILSQTCPARQMVMFSATWPLPVHQLAQEFMDPNPVKVVIGSE 333

Query: 1012 DLAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAARVENMLQKRG 1191
            DLAANHDVMQIVEVLDDRSRD RL+TLL KYHKSQ+NRVLVFVLYKKEAARVENMLQ+RG
Sbjct: 334  DLAANHDVMQIVEVLDDRSRDERLLTLLGKYHKSQRNRVLVFVLYKKEAARVENMLQRRG 393

Query: 1192 WKAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVINYSFPLTTEDY 1371
            W  VS+HGDKAQ+ RT ALSLFK G CPLM+ATDVAARGLDIPDVEVVINYSFPLTTEDY
Sbjct: 394  WNVVSIHGDKAQQARTAALSLFKKGSCPLMIATDVAARGLDIPDVEVVINYSFPLTTEDY 453

Query: 1372 VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLREAGQLVPTDLMKFGTHVKKKESKL 1551
            VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVL+EAGQ+VP DL+KFGTHVKKKESKL
Sbjct: 454  VHRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLKEAGQIVPADLLKFGTHVKKKESKL 513

Query: 1552 YGAHFKEISADAPKSKKITFNDSD 1623
            YGAHF+EI+ADAPKSKKITF+DSD
Sbjct: 514  YGAHFREIAADAPKSKKITFDDSD 537


>gb|EEC70450.1| hypothetical protein OsI_01481 [Oryza sativa Indica Group]
          Length = 512

 Score =  724 bits (1868), Expect = 0.0
 Identities = 357/443 (80%), Positives = 397/443 (89%), Gaps = 3/443 (0%)
 Frame = +1

Query: 304  DDVEIGGGKEVFVSGNDVREVKYTALSSFDEAKLPEEVLECCKGFNKPSPIQSHAWPFLL 483
            ++ E GGGK V V+G    + KY  LSSF    LP +VL+CCKGF +PSPIQ++AWP+LL
Sbjct: 68   EEAENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPSPIQAYAWPYLL 127

Query: 484  DGRDFIGIAATGSGKTLAFGVPALMHIRRT-GRK--KRLNPLCLVLSPTRELAQQIADVL 654
            DGRDFIGIAATGSGKT+AFGVPALMH+RR  G K  K+  P  LVLSPTRELAQQIADVL
Sbjct: 128  DGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVL 187

Query: 655  CEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGFCCLKEVSYVVL 834
            CEAG  CG+SSVC+YGGTSKGPQIS+LK+GVD+VIGTPGR+KDLIEMG C L +VS+VVL
Sbjct: 188  CEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVL 247

Query: 835  DEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDPNPVKVVVGSED 1014
            DEADRMLDMGFEPEVR+ILSQT S+RQMVMFSATWPP+VHQLAQEFMDPNP+KVV+GSED
Sbjct: 248  DEADRMLDMGFEPEVRAILSQTASVRQMVMFSATWPPAVHQLAQEFMDPNPIKVVIGSED 307

Query: 1015 LAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAARVENMLQKRGW 1194
            LAANHDVMQIVEVLDDRSRD+RLV LL+KYHK+Q+NRVLVFVLYK+EA RVE MLQ+RGW
Sbjct: 308  LAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGW 367

Query: 1195 KAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYV 1374
             AVSVHGDKAQ DRT ALSLFK+G CPLM+ATDVA+RGLDIPDVEVVINYS+PLTTEDYV
Sbjct: 368  SAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYV 427

Query: 1375 HRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLREAGQLVPTDLMKFGTHVKKKESKLY 1554
            HRIGRTGRAGKKGVAHTFF QENKGLAGELVNVLREAGQ+VP  L KFGTHVKKKES++Y
Sbjct: 428  HRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIY 487

Query: 1555 GAHFKEISADAPKSKKITFNDSD 1623
            G+HFKEI ADAPKS KITF DSD
Sbjct: 488  GSHFKEIKADAPKSTKITFGDSD 510


>ref|NP_001059424.1| Os07g0301200 [Oryza sativa Japonica Group]
            gi|75325214|sp|Q6YS30.1|RH5_ORYSJ RecName: Full=DEAD-box
            ATP-dependent RNA helicase 5 gi|34394349|dbj|BAC84904.1|
            putative RNA helicase [Oryza sativa Japonica Group]
            gi|113610960|dbj|BAF21338.1| Os07g0301200 [Oryza sativa
            Japonica Group]
          Length = 512

 Score =  721 bits (1862), Expect = 0.0
 Identities = 356/443 (80%), Positives = 396/443 (89%), Gaps = 3/443 (0%)
 Frame = +1

Query: 304  DDVEIGGGKEVFVSGNDVREVKYTALSSFDEAKLPEEVLECCKGFNKPSPIQSHAWPFLL 483
            ++ E GGGK V V+G    + KY  LSSF    LP +VL+CCKGF +PSPIQ++AWP+LL
Sbjct: 68   EEAENGGGKVVAVTGKGSADAKYAPLSSFAATALPPQVLDCCKGFERPSPIQAYAWPYLL 127

Query: 484  DGRDFIGIAATGSGKTLAFGVPALMHIRRT-GRK--KRLNPLCLVLSPTRELAQQIADVL 654
            DGRDFIGIAATGSGKT+AFGVPALMH+RR  G K  K+  P  LVLSPTRELAQQIADVL
Sbjct: 128  DGRDFIGIAATGSGKTIAFGVPALMHVRRKMGEKSAKKGVPRVLVLSPTRELAQQIADVL 187

Query: 655  CEAGKSCGVSSVCVYGGTSKGPQISSLKAGVDVVIGTPGRLKDLIEMGFCCLKEVSYVVL 834
            CEAG  CG+SSVC+YGGTSKGPQIS+LK+GVD+VIGTPGR+KDLIEMG C L +VS+VVL
Sbjct: 188  CEAGAPCGISSVCLYGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVL 247

Query: 835  DEADRMLDMGFEPEVRSILSQTCSIRQMVMFSATWPPSVHQLAQEFMDPNPVKVVVGSED 1014
            DEADRMLDMGFEPEVR+ILSQT S+RQ VMFSATWPP+VHQLAQEFMDPNP+KVV+GSED
Sbjct: 248  DEADRMLDMGFEPEVRAILSQTASVRQTVMFSATWPPAVHQLAQEFMDPNPIKVVIGSED 307

Query: 1015 LAANHDVMQIVEVLDDRSRDARLVTLLEKYHKSQKNRVLVFVLYKKEAARVENMLQKRGW 1194
            LAANHDVMQIVEVLDDRSRD+RLV LL+KYHK+Q+NRVLVFVLYK+EA RVE MLQ+RGW
Sbjct: 308  LAANHDVMQIVEVLDDRSRDSRLVALLDKYHKAQRNRVLVFVLYKREATRVETMLQRRGW 367

Query: 1195 KAVSVHGDKAQRDRTNALSLFKDGICPLMVATDVAARGLDIPDVEVVINYSFPLTTEDYV 1374
             AVSVHGDKAQ DRT ALSLFK+G CPLM+ATDVA+RGLDIPDVEVVINYS+PLTTEDYV
Sbjct: 368  SAVSVHGDKAQHDRTKALSLFKEGSCPLMIATDVASRGLDIPDVEVVINYSYPLTTEDYV 427

Query: 1375 HRIGRTGRAGKKGVAHTFFMQENKGLAGELVNVLREAGQLVPTDLMKFGTHVKKKESKLY 1554
            HRIGRTGRAGKKGVAHTFF QENKGLAGELVNVLREAGQ+VP  L KFGTHVKKKES++Y
Sbjct: 428  HRIGRTGRAGKKGVAHTFFTQENKGLAGELVNVLREAGQVVPPALTKFGTHVKKKESQIY 487

Query: 1555 GAHFKEISADAPKSKKITFNDSD 1623
            G+HFKEI ADAPKS KITF DSD
Sbjct: 488  GSHFKEIKADAPKSTKITFGDSD 510


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