BLASTX nr result

ID: Coptis21_contig00001785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001785
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFC89654.1| RBP42 [Elaeis guineensis]                               80   2e-13
gb|ACN41154.1| unknown [Picea sitchensis]                              80   2e-13
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248...    79   3e-13
ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ...    79   4e-13
ref|XP_002316830.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12

>gb|AFC89654.1| RBP42 [Elaeis guineensis]
          Length = 413

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = +1

Query: 43  MDPSLKKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHL 222
           MDP+ KKRK+++        G  +  P   LT EDARKI+EP T+E L++IV+ ++ R  
Sbjct: 1   MDPTSKKRKSDEN-------GAVVASPAL-LTPEDARKIVEPFTREHLLDIVREAMCRDA 52

Query: 223 DVLESVRLIADRDPTQRKLFIRG 291
            VL++VR IADRDP QRKLFIRG
Sbjct: 53  GVLDAVRAIADRDPAQRKLFIRG 75


>gb|ACN41154.1| unknown [Picea sitchensis]
          Length = 446

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/83 (48%), Positives = 55/83 (66%)
 Frame = +1

Query: 43  MDPSLKKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHL 222
           M+ S KKRK E+               +  +T+ED RK++EP T+EQL++I+Q + T+HL
Sbjct: 1   MEASAKKRKVEENG-------------VVDITVEDTRKMLEPFTREQLLDILQEAATKHL 47

Query: 223 DVLESVRLIADRDPTQRKLFIRG 291
            VLE VR IAD+DP QRKLF+RG
Sbjct: 48  GVLEQVRSIADKDPAQRKLFVRG 70


>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
           gi|147789426|emb|CAN66609.1| hypothetical protein
           VITISV_017556 [Vitis vinifera]
          Length = 449

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/78 (55%), Positives = 55/78 (70%)
 Frame = +1

Query: 58  KKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHLDVLES 237
           KKRK ++         +T  + +T L  EDARKIIEP   +QL+EI+QN+  RHLDVL++
Sbjct: 5   KKRKMDENGLV-----STDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDA 59

Query: 238 VRLIADRDPTQRKLFIRG 291
           +R IADRD TQRKLFIRG
Sbjct: 60  IRSIADRDLTQRKLFIRG 77


>ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
           communis] gi|223538254|gb|EEF39863.1| Heterogeneous
           nuclear ribonucleoprotein A1, putative [Ricinus
           communis]
          Length = 398

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 43/78 (55%), Positives = 54/78 (69%)
 Frame = +1

Query: 58  KKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHLDVLES 237
           KKRK ++         T+   P T L+ +D RKIIEP T+EQL+EI+QN+ TRH DVLES
Sbjct: 5   KKRKADENGTTTITT-TSSPPPTTTLSPQDIRKIIEPFTKEQLLEILQNAATRHADVLES 63

Query: 238 VRLIADRDPTQRKLFIRG 291
           VR +AD D + RKLFIRG
Sbjct: 64  VRTLADSDISLRKLFIRG 81


>ref|XP_002316830.1| predicted protein [Populus trichocarpa] gi|222859895|gb|EEE97442.1|
           predicted protein [Populus trichocarpa]
          Length = 369

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/79 (53%), Positives = 54/79 (68%)
 Frame = +1

Query: 55  LKKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHLDVLE 234
           +KKRK  D        GTT + PIT LT E+ RKIIEP T++QL++I+Q++   H DVL 
Sbjct: 4   IKKRKA-DENGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATLHHSDVLN 62

Query: 235 SVRLIADRDPTQRKLFIRG 291
           SVR +AD D + RKLFIRG
Sbjct: 63  SVRSVADGDISLRKLFIRG 81


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