BLASTX nr result
ID: Coptis21_contig00001785
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001785 (293 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFC89654.1| RBP42 [Elaeis guineensis] 80 2e-13 gb|ACN41154.1| unknown [Picea sitchensis] 80 2e-13 ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 79 3e-13 ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, ... 79 4e-13 ref|XP_002316830.1| predicted protein [Populus trichocarpa] gi|2... 77 1e-12 >gb|AFC89654.1| RBP42 [Elaeis guineensis] Length = 413 Score = 80.1 bits (196), Expect = 2e-13 Identities = 43/83 (51%), Positives = 57/83 (68%) Frame = +1 Query: 43 MDPSLKKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHL 222 MDP+ KKRK+++ G + P LT EDARKI+EP T+E L++IV+ ++ R Sbjct: 1 MDPTSKKRKSDEN-------GAVVASPAL-LTPEDARKIVEPFTREHLLDIVREAMCRDA 52 Query: 223 DVLESVRLIADRDPTQRKLFIRG 291 VL++VR IADRDP QRKLFIRG Sbjct: 53 GVLDAVRAIADRDPAQRKLFIRG 75 >gb|ACN41154.1| unknown [Picea sitchensis] Length = 446 Score = 80.1 bits (196), Expect = 2e-13 Identities = 40/83 (48%), Positives = 55/83 (66%) Frame = +1 Query: 43 MDPSLKKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHL 222 M+ S KKRK E+ + +T+ED RK++EP T+EQL++I+Q + T+HL Sbjct: 1 MEASAKKRKVEENG-------------VVDITVEDTRKMLEPFTREQLLDILQEAATKHL 47 Query: 223 DVLESVRLIADRDPTQRKLFIRG 291 VLE VR IAD+DP QRKLF+RG Sbjct: 48 GVLEQVRSIADKDPAQRKLFVRG 70 >ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera] gi|147789426|emb|CAN66609.1| hypothetical protein VITISV_017556 [Vitis vinifera] Length = 449 Score = 79.3 bits (194), Expect = 3e-13 Identities = 43/78 (55%), Positives = 55/78 (70%) Frame = +1 Query: 58 KKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHLDVLES 237 KKRK ++ +T + +T L EDARKIIEP +QL+EI+QN+ RHLDVL++ Sbjct: 5 KKRKMDENGLV-----STDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDA 59 Query: 238 VRLIADRDPTQRKLFIRG 291 +R IADRD TQRKLFIRG Sbjct: 60 IRSIADRDLTQRKLFIRG 77 >ref|XP_002522563.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] gi|223538254|gb|EEF39863.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] Length = 398 Score = 79.0 bits (193), Expect = 4e-13 Identities = 43/78 (55%), Positives = 54/78 (69%) Frame = +1 Query: 58 KKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHLDVLES 237 KKRK ++ T+ P T L+ +D RKIIEP T+EQL+EI+QN+ TRH DVLES Sbjct: 5 KKRKADENGTTTITT-TSSPPPTTTLSPQDIRKIIEPFTKEQLLEILQNAATRHADVLES 63 Query: 238 VRLIADRDPTQRKLFIRG 291 VR +AD D + RKLFIRG Sbjct: 64 VRTLADSDISLRKLFIRG 81 >ref|XP_002316830.1| predicted protein [Populus trichocarpa] gi|222859895|gb|EEE97442.1| predicted protein [Populus trichocarpa] Length = 369 Score = 77.0 bits (188), Expect = 1e-12 Identities = 42/79 (53%), Positives = 54/79 (68%) Frame = +1 Query: 55 LKKRKTEDXXXXXXXXGTTLTEPITGLTLEDARKIIEPLTQEQLMEIVQNSLTRHLDVLE 234 +KKRK D GTT + PIT LT E+ RKIIEP T++QL++I+Q++ H DVL Sbjct: 4 IKKRKA-DENGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATLHHSDVLN 62 Query: 235 SVRLIADRDPTQRKLFIRG 291 SVR +AD D + RKLFIRG Sbjct: 63 SVRSVADGDISLRKLFIRG 81