BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001780
         (1809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis v...   561   e-157
emb|CBI19930.3| unnamed protein product [Vitis vinifera]              561   e-157
ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|2...   547   e-153
ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus ...   544   e-152
ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|2...   525   e-146

>ref|XP_002268441.2| PREDICTED: F-box protein SKP2B-like [Vitis vinifera]
          Length = 370

 Score =  561 bits (1446), Expect = e-157
 Identities = 273/370 (73%), Positives = 316/370 (85%), Gaps = 3/370 (0%)
 Frame = -3

Query: 1309 MVGEGLRSDDLEFCFQQLVVFXXXXXXXXXG---VMTDWKDLPMELLLRIVSLVDDRTVI 1139
            MVG+G   ++LEFCF++LV+          G   V+T+WKD+PMELLLRIV+LVDDRTVI
Sbjct: 3    MVGQG--GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI 60

Query: 1138 TASGVCTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLEDDAI 959
             ASGVC+GWRDA+CLGLTHL LSWCKN+MNNL+LSLAPKFTKLQ L+LRQ K QLED A+
Sbjct: 61   MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV 120

Query: 958  EAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCR 779
            E +AN+CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF DAALA+LTSFCR
Sbjct: 121  EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR 180

Query: 778  KLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDL 599
            +LKILNLCGC  AA++RAL+AI  NCS L++LNLGWCE VSD GV SLA+GCP+L ALDL
Sbjct: 181  RLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL 240

Query: 598  CGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRY 419
            CGCV ITD+SV+ALA RC+HLRSLGLY+C+NITDKAMYSLA SRVK+K ++WES+K    
Sbjct: 241  CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS 300

Query: 418  EEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACAFQAHR 239
            EEGL+ LNISQCT+LTP AVQAVCDSFP LHTCPGRHSLIISGCL LTSVHCAC  QAHR
Sbjct: 301  EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 360

Query: 238  AINPLAHSAH 209
              + L+H AH
Sbjct: 361  TASQLSHPAH 370


>emb|CBI19930.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  561 bits (1446), Expect = e-157
 Identities = 273/370 (73%), Positives = 316/370 (85%), Gaps = 3/370 (0%)
 Frame = -3

Query: 1309 MVGEGLRSDDLEFCFQQLVVFXXXXXXXXXG---VMTDWKDLPMELLLRIVSLVDDRTVI 1139
            MVG+G   ++LEFCF++LV+          G   V+T+WKD+PMELLLRIV+LVDDRTVI
Sbjct: 61   MVGQG--GEELEFCFERLVMGGDGRGGMDGGGVGVITEWKDVPMELLLRIVALVDDRTVI 118

Query: 1138 TASGVCTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLEDDAI 959
             ASGVC+GWRDA+CLGLTHL LSWCKN+MNNL+LSLAPKFTKLQ L+LRQ K QLED A+
Sbjct: 119  MASGVCSGWRDAICLGLTHLSLSWCKNNMNNLVLSLAPKFTKLQALTLRQDKPQLEDKAV 178

Query: 958  EAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCR 779
            E +AN+CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF DAALA+LTSFCR
Sbjct: 179  EIIANYCHDLQDLDLSKSFKLSDSSLYALAHGCPNLTKLNISGCTAFSDAALAHLTSFCR 238

Query: 778  KLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDL 599
            +LKILNLCGC  AA++RAL+AI  NCS L++LNLGWCE VSD GV SLA+GCP+L ALDL
Sbjct: 239  RLKILNLCGCGKAASNRALQAIGRNCSQLQSLNLGWCEDVSDAGVMSLAYGCPDLRALDL 298

Query: 598  CGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRY 419
            CGCV ITD+SV+ALA RC+HLRSLGLY+C+NITDKAMYSLA SRVK+K ++WES+K    
Sbjct: 299  CGCVHITDESVIALANRCLHLRSLGLYFCQNITDKAMYSLAQSRVKNKHEMWESMKSRYS 358

Query: 418  EEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACAFQAHR 239
            EEGL+ LNISQCT+LTP AVQAVCDSFP LHTCPGRHSLIISGCL LTSVHCAC  QAHR
Sbjct: 359  EEGLMNLNISQCTALTPPAVQAVCDSFPALHTCPGRHSLIISGCLSLTSVHCACGVQAHR 418

Query: 238  AINPLAHSAH 209
              + L+H AH
Sbjct: 419  TASQLSHPAH 428


>ref|XP_002306672.1| predicted protein [Populus trichocarpa] gi|222856121|gb|EEE93668.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  547 bits (1409), Expect = e-153
 Identities = 262/368 (71%), Positives = 304/368 (82%), Gaps = 1/368 (0%)
 Frame = -3

Query: 1309 MVGEG-LRSDDLEFCFQQLVVFXXXXXXXXXGVMTDWKDLPMELLLRIVSLVDDRTVITA 1133
            M GEG  RS+DL  CF++L++           V+T+WKD+P+ELLLRIVSLVDDRTVI A
Sbjct: 1    MAGEGKARSEDLNLCFEKLMMLAFGGA-----VITEWKDIPVELLLRIVSLVDDRTVIMA 55

Query: 1132 SGVCTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLEDDAIEA 953
            SGVC+GWRDA+C+GLTHLCLSWCKN+MNNL+LSLAPKFTKLQ L LRQ K QLED A+E 
Sbjct: 56   SGVCSGWRDAICMGLTHLCLSWCKNNMNNLVLSLAPKFTKLQTLVLRQDKPQLEDHAVET 115

Query: 952  VANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTSFCRKL 773
            +A++CHDLQDLDLS S KL+D SLY+LAHGCP+LTKLNISGCTAF D  L YLT FC+KL
Sbjct: 116  IASYCHDLQDLDLSKSFKLSDLSLYALAHGCPNLTKLNISGCTAFSDDGLEYLTEFCQKL 175

Query: 772  KILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEALDLCG 593
            K LNLCGCV  ATDRAL+ I  NCS L+TLNLGWCE V DVGV SLA+GCP+L  LDLCG
Sbjct: 176  KFLNLCGCVKGATDRALQGIGRNCSQLQTLNLGWCENVGDVGVMSLAYGCPDLRTLDLCG 235

Query: 592  CVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKKSRYEE 413
            CV ITDDSV+ALA RC HLRSLGLYYC+NITD+AMYSL ++RVK+K  +WES+K    EE
Sbjct: 236  CVCITDDSVIALANRCPHLRSLGLYYCRNITDRAMYSLVHNRVKNKLSMWESMKGRCDEE 295

Query: 412  GLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACAFQAHRAI 233
            GL +LNISQCT+LTP AVQA+CDSFP LHTC GRHSL++SGCL+LTSVHC CA QAHR+ 
Sbjct: 296  GLSRLNISQCTALTPPAVQALCDSFPALHTCSGRHSLVMSGCLNLTSVHCVCAVQAHRSA 355

Query: 232  NPLAHSAH 209
            +   H AH
Sbjct: 356  SSFPHPAH 363


>ref|XP_002520258.1| F-box/LRR-repeat protein, putative [Ricinus communis]
            gi|223540477|gb|EEF42044.1| F-box/LRR-repeat protein,
            putative [Ricinus communis]
          Length = 373

 Score =  544 bits (1401), Expect = e-152
 Identities = 266/373 (71%), Positives = 306/373 (82%), Gaps = 6/373 (1%)
 Frame = -3

Query: 1309 MVGEG-LRSDDLEFCFQQLVVFXXXXXXXXXG-----VMTDWKDLPMELLLRIVSLVDDR 1148
            MVG G LRS+DL  CF++L++                V+T+WKD+PMELLLRIVSLVDDR
Sbjct: 1    MVGGGKLRSEDLNRCFEKLMMAGAAGNTEGRVKMEGVVITEWKDIPMELLLRIVSLVDDR 60

Query: 1147 TVITASGVCTGWRDAVCLGLTHLCLSWCKNSMNNLLLSLAPKFTKLQVLSLRQVKAQLED 968
            T+I ASGVC+GWRDA+CLGLTHLCLSWCKN MNNL+L LAPKFTKL+ L LRQ K QLED
Sbjct: 61   TIIMASGVCSGWRDAICLGLTHLCLSWCKNHMNNLVLWLAPKFTKLETLVLRQDKPQLED 120

Query: 967  DAIEAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCPHLTKLNISGCTAFGDAALAYLTS 788
            +A+EA+A +CHDL+DLDLS S KLTD SLY+LAHGCP+LTKLNISGCT+F D  L YLT 
Sbjct: 121  NAVEAIARYCHDLEDLDLSKSFKLTDCSLYALAHGCPNLTKLNISGCTSFSDGGLEYLTG 180

Query: 787  FCRKLKILNLCGCVPAATDRALKAIAYNCSLLETLNLGWCEAVSDVGVTSLAFGCPNLEA 608
            FCRKLKILNLCGCV AATDRAL+AI  NCS L++LNLGWCE V DVGV SLA+GCP+L  
Sbjct: 181  FCRKLKILNLCGCVKAATDRALQAIGRNCSQLQSLNLGWCENVGDVGVMSLAYGCPDLRT 240

Query: 607  LDLCGCVLITDDSVVALATRCMHLRSLGLYYCKNITDKAMYSLANSRVKSKRDLWESVKK 428
            LDLCGCV ITDDSV+ALA RC+HLRSLGLYYC+NITD+AMYSL +SRVK+K  +WESVK 
Sbjct: 241  LDLCGCVNITDDSVIALAYRCLHLRSLGLYYCRNITDRAMYSLVHSRVKNKPAMWESVKG 300

Query: 427  SRYEEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCPGRHSLIISGCLHLTSVHCACAFQ 248
               EEGL  LNISQCT+LTP AVQA+CD FP LHTC GRHSL++SGCL+LTSVHCACA Q
Sbjct: 301  RCDEEGLRSLNISQCTALTPPAVQALCDCFPALHTCSGRHSLVMSGCLNLTSVHCACAVQ 360

Query: 247  AHRAINPLAHSAH 209
            AHR    + + AH
Sbjct: 361  AHRTFRFIPNPAH 373


>ref|XP_002302202.1| predicted protein [Populus trichocarpa] gi|222843928|gb|EEE81475.1|
            predicted protein [Populus trichocarpa]
          Length = 358

 Score =  525 bits (1352), Expect = e-146
 Identities = 248/336 (73%), Positives = 288/336 (85%)
 Frame = -3

Query: 1216 VMTDWKDLPMELLLRIVSLVDDRTVITASGVCTGWRDAVCLGLTHLCLSWCKNSMNNLLL 1037
            V+T+WKD+PM+LLLRIVSLVDDRT+I ASGVC+GWRDA+C GLTHLCLSWCKN+MNNL+L
Sbjct: 23   VITEWKDIPMKLLLRIVSLVDDRTLIMASGVCSGWRDAICSGLTHLCLSWCKNNMNNLVL 82

Query: 1036 SLAPKFTKLQVLSLRQVKAQLEDDAIEAVANFCHDLQDLDLSLSNKLTDQSLYSLAHGCP 857
            SLAPKFTKLQ L LRQ K QLED+A+E +A++CHDLQDLDLS S KL+D SLY+LAHG P
Sbjct: 83   SLAPKFTKLQTLVLRQDKPQLEDNAVETIASYCHDLQDLDLSKSFKLSDLSLYALAHGFP 142

Query: 856  HLTKLNISGCTAFGDAALAYLTSFCRKLKILNLCGCVPAATDRALKAIAYNCSLLETLNL 677
            +LTKLNISGCTAF D +L YLT FCRKLKILNLCGCV  ATDRAL+AI  NCS L++LNL
Sbjct: 143  NLTKLNISGCTAFSDVSLEYLTEFCRKLKILNLCGCVNGATDRALQAIGRNCSQLQSLNL 202

Query: 676  GWCEAVSDVGVTSLAFGCPNLEALDLCGCVLITDDSVVALATRCMHLRSLGLYYCKNITD 497
            GWCE VSDVGV SLA+GCP++  LDLCGCV ITDDSV+ALA RC HLRSL LYYC+NITD
Sbjct: 203  GWCENVSDVGVMSLAYGCPDIRTLDLCGCVCITDDSVIALANRCPHLRSLCLYYCRNITD 262

Query: 496  KAMYSLANSRVKSKRDLWESVKKSRYEEGLVKLNISQCTSLTPSAVQAVCDSFPDLHTCP 317
            +AMYSL ++RVK+K  +WES+K    EEGL  LNISQCT++TP AVQA+CDSFP LHTC 
Sbjct: 263  RAMYSLVHNRVKNKPAMWESMKGRYDEEGLKSLNISQCTAITPPAVQALCDSFPALHTCS 322

Query: 316  GRHSLIISGCLHLTSVHCACAFQAHRAINPLAHSAH 209
            GRHSL++SGC +LTSVHCACA QAH   + + H AH
Sbjct: 323  GRHSLVMSGCWNLTSVHCACAVQAHHTASSIPHPAH 358