BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001779
         (893 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|2...   222   8e-56
dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]              221   2e-55
ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis ...   221   2e-55
ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersi...   218   1e-54
ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [C...   215   1e-53

>ref|XP_002331484.1| predicted protein [Populus trichocarpa] gi|222873562|gb|EEF10693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  222 bits (566), Expect = 8e-56
 Identities = 101/133 (75%), Positives = 118/133 (88%)
 Frame = +1

Query: 130 MAVRLRLSRFGCKNKPFYRVMAANSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 309
           M VR+RLSRFGC NKPFYRVMAA+SRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 310 YWLSVGAQPSEPVQRILFRAGVLPPPPMLAMEHKGGPRDARPINPMTGKYITPNKSSAAD 489
           YWLSVGAQPSEPVQRILFRAGVLPPPPM+ M  KGGPRD RP++PMTG++++P KS ++ 
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGVLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 490 ELKETADDGKDAS 528
           +   + +D + A+
Sbjct: 121 QSNASKNDTEAAT 133


>dbj|BAG49074.1| 30S ribosomal protein S16 [Populus alba]
          Length = 136

 Score =  221 bits (563), Expect = 2e-55
 Identities = 100/133 (75%), Positives = 118/133 (88%)
 Frame = +1

Query: 130 MAVRLRLSRFGCKNKPFYRVMAANSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 309
           M VR+RLSRFGC NKPFYRVMAA+SRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCSNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFERVK 60

Query: 310 YWLSVGAQPSEPVQRILFRAGVLPPPPMLAMEHKGGPRDARPINPMTGKYITPNKSSAAD 489
           YWLSVGAQPSEPVQRILFRAG+LPPPPM+ M  KGGPRD RP++PMTG++++P KS ++ 
Sbjct: 61  YWLSVGAQPSEPVQRILFRAGLLPPPPMMVMGRKGGPRDTRPVDPMTGRFLSPEKSPSSS 120

Query: 490 ELKETADDGKDAS 528
           +   + +D + A+
Sbjct: 121 QSNASKNDTEAAT 133


>ref|XP_002281553.1| PREDICTED: 30S ribosomal protein S16 [Vitis vinifera]
           gi|297738652|emb|CBI27897.3| unnamed protein product
           [Vitis vinifera]
          Length = 136

 Score =  221 bits (563), Expect = 2e-55
 Identities = 100/132 (75%), Positives = 118/132 (89%)
 Frame = +1

Query: 130 MAVRLRLSRFGCKNKPFYRVMAANSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 309
           M VR+RLSRFGCKN+PFYRVMAA+SRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK
Sbjct: 1   MVVRIRLSRFGCKNRPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 60

Query: 310 YWLSVGAQPSEPVQRILFRAGVLPPPPMLAMEHKGGPRDARPINPMTGKYITPNKSSAAD 489
           YWLSVGAQPS+PVQ+ILFRAG+LPPPPM+AM  KGG RD RP++P+TG+ +TPNK +  +
Sbjct: 61  YWLSVGAQPSDPVQQILFRAGLLPPPPMVAMGRKGGHRDTRPVDPLTGRILTPNKPTDVE 120

Query: 490 ELKETADDGKDA 525
           + K+  D  +D+
Sbjct: 121 QPKDDEDGNEDS 132


>ref|NP_001234444.1| 30S ribosomal protein S16 [Solanum lycopersicum]
           gi|190609945|dbj|BAG49073.1| 30S ribosomal protein S16
           [Solanum lycopersicum]
          Length = 132

 Score =  218 bits (555), Expect = 1e-54
 Identities = 104/132 (78%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
 Frame = +1

Query: 130 MAVRLRLSRFGCKNKPFYRVMAANSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 309
           M VRLRLSRFGCKNKPFYRVMAA+SRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDR+K
Sbjct: 1   MVVRLRLSRFGCKNKPFYRVMAADSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRLK 60

Query: 310 YWLSVGAQPSEPVQRILFRAGVLPPPPMLAMEHKGGPRDARPINPMTGKYITPNKS-SAA 486
           YWLSVGAQPS+PVQR+LFRAGVLPPPPMLAM  KGGPRD R ++PMTG+  TP  + SA 
Sbjct: 61  YWLSVGAQPSDPVQRLLFRAGVLPPPPMLAMGQKGGPRDTRLVDPMTGRITTPESTKSAV 120

Query: 487 DELKETADDGKD 522
             +    D+ KD
Sbjct: 121 PTVGSEVDEDKD 132


>ref|XP_004172096.1| PREDICTED: 30S ribosomal protein S16-like [Cucumis sativus]
          Length = 127

 Score =  215 bits (548), Expect = 1e-53
 Identities = 99/136 (72%), Positives = 115/136 (84%)
 Frame = +1

Query: 130 MAVRLRLSRFGCKNKPFYRVMAANSRSPRDGKHLEVLGYYNPLPGQDGGKRMGLNFDRVK 309
           M VR+RLSRFGCKNKPFYRVMAA+SRSPRDGKHLE+LGYYNPLPGQDGGKRMGLNF+RVK
Sbjct: 1   MVVRIRLSRFGCKNKPFYRVMAADSRSPRDGKHLEILGYYNPLPGQDGGKRMGLNFERVK 60

Query: 310 YWLSVGAQPSEPVQRILFRAGVLPPPPMLAMEHKGGPRDARPINPMTGKYITPNKSSAAD 489
           YWLSVGAQPS+PVQRILFR+G+LPPPPM+AM  KGGPRD RP++P++G+++TP K     
Sbjct: 61  YWLSVGAQPSDPVQRILFRSGLLPPPPMVAMGRKGGPRDTRPVDPLSGRFVTPAKKPT-- 118

Query: 490 ELKETADDGKDASEDS 537
                  DG +   DS
Sbjct: 119 -------DGSNGEADS 127