BLASTX nr result

ID: Coptis21_contig00001769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001769
         (1589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002591868.1| hypothetical protein BRAFLDRAFT_89382 [Branc...    67   2e-08

>ref|XP_002591868.1| hypothetical protein BRAFLDRAFT_89382 [Branchiostoma floridae]
            gi|229277080|gb|EEN47879.1| hypothetical protein
            BRAFLDRAFT_89382 [Branchiostoma floridae]
          Length = 652

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 51/165 (30%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
 Frame = -2

Query: 1342 LSSYPPELAKIDNFAITVWGSKIYFIGGSYLLSEEVLYRYNRDASRRVFAYDTRTRSWDD 1163
            L++ P EL   ++F I   G  IY  GG    S+ V        S RVF +DT+T SW  
Sbjct: 364  LTTLPDELRTTEHFEIAGTGGCIYIAGGRSFNSQMVT---ESKPSGRVFCFDTKTDSWS- 419

Query: 1162 ELAPMQVTRSEHTAIAARNKIYVFGGAKSDK--LLLQPGLAHWGECYDIATNKWVYLTP- 992
            ELAP+ + R      A    +Y  GG  +D   L+ Q    +  ECY+I TN W +  P 
Sbjct: 420  ELAPLLMPRYNFALTAFDGHLYAIGGFTADSGGLVCQRPKVNCVECYNIETNTWEFACPL 479

Query: 991  ------PTREIFISSYALVKNSSQILFYRTPPKLMTIYDLDDNLW 875
                  PT  + +    L  + S    +    + +  YD D N W
Sbjct: 480  PTGVVNPTSTVCLGQIYLSAHPS---CWDDKNRRLMCYDPDTNQW 521


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