BLASTX nr result

ID: Coptis21_contig00001764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001764
         (1443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]    70   2e-09
ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|2...    67   9e-09
ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein lig...    66   2e-08
ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein lig...    66   2e-08
ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group] g...    66   3e-08

>emb|CAN72662.1| hypothetical protein VITISV_013890 [Vitis vinifera]
          Length = 500

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +2

Query: 749 HLSGCMSCLNEIQGKKWGCPVCRAKIKQVVKIYAV 853
           H++GCMSCLNEI+ KKWGCPVCRAKI QVVK+Y+V
Sbjct: 466 HMAGCMSCLNEIKAKKWGCPVCRAKIDQVVKLYSV 500


>ref|XP_002311673.1| predicted protein [Populus trichocarpa] gi|222851493|gb|EEE89040.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 67.4 bits (163), Expect = 9e-09
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +2

Query: 749 HLSGCMSCLNEIQGKKWGCPVCRAKIKQVVKIYAV 853
           H++GCMSCL EI+ KKWGCPVCRAKI QVV++YAV
Sbjct: 408 HMAGCMSCLKEIKAKKWGCPVCRAKIDQVVRLYAV 442


>ref|XP_004167338.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +2

Query: 749 HLSGCMSCLNEIQGKKWGCPVCRAKIKQVVKIYAV 853
           H++GCM+CL EI+ KKWGCPVCRAKI QVV++YAV
Sbjct: 425 HMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459


>ref|XP_004134060.1| PREDICTED: putative E3 ubiquitin-protein ligase XBAT35-like
           [Cucumis sativus]
          Length = 459

 Score = 66.2 bits (160), Expect = 2e-08
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +2

Query: 749 HLSGCMSCLNEIQGKKWGCPVCRAKIKQVVKIYAV 853
           H++GCM+CL EI+ KKWGCPVCRAKI QVV++YAV
Sbjct: 425 HMAGCMNCLTEIKSKKWGCPVCRAKIDQVVRLYAV 459


>ref|NP_001059535.1| Os07g0446100 [Oryza sativa Japonica Group]
           gi|75327171|sp|Q7XI08.1|XB34_ORYSJ RecName:
           Full=Probable E3 ubiquitin-protein ligase XBOS34;
           AltName: Full=Ankyrin repeat domain and RING
           finger-containing protein XBOS34; AltName: Full=XB3
           protein homolog 4 gi|33146928|dbj|BAC79949.1|
           auxin-regulated protein-like protein [Oryza sativa
           Japonica Group] gi|113611071|dbj|BAF21449.1|
           Os07g0446100 [Oryza sativa Japonica Group]
          Length = 513

 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 23/35 (65%), Positives = 32/35 (91%)
 Frame = +2

Query: 749 HLSGCMSCLNEIQGKKWGCPVCRAKIKQVVKIYAV 853
           H++GCMSCL +I+ KKWGCP+CRAKI Q++++YAV
Sbjct: 479 HMAGCMSCLKDIESKKWGCPICRAKINQIIRLYAV 513


Top