BLASTX nr result

ID: Coptis21_contig00001756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001756
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313970.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|XP_002866270.1| hypothetical protein ARALYDRAFT_919046 [Arab...   111   5e-23
ref|NP_200656.2| glucan endo-1,3-beta-glucosidase 9 [Arabidopsis...   109   2e-22
ref|XP_003537313.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   109   2e-22
ref|XP_002515703.1| Glucan endo-1,3-beta-glucosidase, acidic iso...   108   6e-22

>ref|XP_002313970.1| predicted protein [Populus trichocarpa] gi|222850378|gb|EEE87925.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/104 (57%), Positives = 66/104 (63%)
 Frame = -2

Query: 312 IVVSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIP 133
           I V +IGVNWGT++SHPLPPDKVVELLKSN I KVKLFDADP                IP
Sbjct: 17  ITVQAIGVNWGTTSSHPLPPDKVVELLKSNKITKVKLFDADPLVLQALSGSNIGVTVGIP 76

Query: 132 NXXXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEP 1
           N              SWVHDN+TRY S+G   VRIEY+AVGDEP
Sbjct: 77  NSMLKSLNSSKKVAESWVHDNVTRYVSSGNSGVRIEYVAVGDEP 120


>ref|XP_002866270.1| hypothetical protein ARALYDRAFT_919046 [Arabidopsis lyrata subsp.
           lyrata] gi|297312105|gb|EFH42529.1| hypothetical protein
           ARALYDRAFT_919046 [Arabidopsis lyrata subsp. lyrata]
          Length = 480

 Score =  111 bits (278), Expect = 5e-23
 Identities = 60/103 (58%), Positives = 64/103 (62%)
 Frame = -2

Query: 309 VVSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPN 130
           +V + GVNWGT ASHPLPP KVVELLKSNGI KVKLFDADP                I N
Sbjct: 22  IVVAFGVNWGTEASHPLPPSKVVELLKSNGIAKVKLFDADPKVLRALSGSNIGVTVGIQN 81

Query: 129 XXXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEP 1
                         SWVHDN+TRYF NGG  VRIEY+AVGDEP
Sbjct: 82  SMLKSLNASVKVAESWVHDNVTRYF-NGGNRVRIEYVAVGDEP 123


>ref|NP_200656.2| glucan endo-1,3-beta-glucosidase 9 [Arabidopsis thaliana]
           gi|75170428|sp|Q9FGH4.1|E139_ARATH RecName: Full=Glucan
           endo-1,3-beta-glucosidase 9; AltName:
           Full=(1->3)-beta-glucan endohydrolase 9;
           Short=(1->3)-beta-glucanase 9; AltName:
           Full=Beta-1,3-endoglucanase 9; Short=Beta-1,3-glucanase
           9; Flags: Precursor gi|10177025|dbj|BAB10263.1|
           beta-1,3-glucanase-like [Arabidopsis thaliana]
           gi|28393035|gb|AAO41952.1| putative glycosyl hydrolase
           family 17 protein [Arabidopsis thaliana]
           gi|28827612|gb|AAO50650.1| putative glycosyl hydrolase
           family 17 protein [Arabidopsis thaliana]
           gi|332009675|gb|AED97058.1| glucan
           endo-1,3-beta-glucosidase 9 [Arabidopsis thaliana]
          Length = 476

 Score =  109 bits (273), Expect = 2e-22
 Identities = 58/102 (56%), Positives = 64/102 (62%)
 Frame = -2

Query: 306 VSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPNX 127
           V ++G+NWGT ASHPLPP KVVELLKSNGI KVKLFDADP                I N 
Sbjct: 23  VRAVGINWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNS 82

Query: 126 XXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEP 1
                        SWVHDN+TRYF NGG  VRIEY+AVG+EP
Sbjct: 83  MLKSLNASVKVAESWVHDNVTRYF-NGGNRVRIEYVAVGEEP 123


>ref|XP_003537313.1| PREDICTED: glucan endo-1,3-beta-glucosidase 9-like [Glycine max]
          Length = 465

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/103 (53%), Positives = 63/103 (61%)
 Frame = -2

Query: 309 VVSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPN 130
           +V ++GVNWGT ASHPLPP KVV+LLKSN INKVKLFDA+                 +PN
Sbjct: 4   MVGAVGVNWGTMASHPLPPHKVVKLLKSNSINKVKLFDANSDVLQALSGSNIAVTVGVPN 63

Query: 129 XXXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEP 1
                         SWVHDN+TRY  NGG   RIEY+AVGDEP
Sbjct: 64  TLLRSLNSSKKAADSWVHDNVTRYMPNGGTVTRIEYVAVGDEP 106


>ref|XP_002515703.1| Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O, putative
           [Ricinus communis] gi|223545140|gb|EEF46650.1| Glucan
           endo-1,3-beta-glucosidase, acidic isoform PR-O, putative
           [Ricinus communis]
          Length = 395

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/99 (56%), Positives = 62/99 (62%)
 Frame = -2

Query: 297 IGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPNXXXX 118
           IGVNWGT+ASHPLPP K VELLK+N I+KVKLFDADP                IPN    
Sbjct: 8   IGVNWGTTASHPLPPPKAVELLKTNNISKVKLFDADPLVLQALSGSNIGVTVGIPNSMLK 67

Query: 117 XXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEP 1
                     SWVHDN+TRYFS G   VRI+Y+AVGDEP
Sbjct: 68  TLNSSKKAADSWVHDNVTRYFSAGTTGVRIQYVAVGDEP 106


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