BLASTX nr result

ID: Coptis21_contig00001754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001754
         (1340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK48563.1| unknown [Medicago truncatula]                          152   2e-34
ref|XP_002299329.1| SAUR family protein [Populus trichocarpa] gi...   147   5e-33
ref|XP_002303770.1| SAUR family protein [Populus trichocarpa] gi...   147   5e-33
gb|AFK33528.1| unknown [Lotus japonicus]                              144   5e-32
ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854...   137   6e-30

>gb|AFK48563.1| unknown [Medicago truncatula]
          Length = 162

 Score =  152 bits (384), Expect = 2e-34
 Identities = 79/156 (50%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
 Frame = +1

Query: 511 GNPKGKTGLINKTLERCRSIGSGG-GKKFSRRPLPIDFTXXXXXXXXXXXXXXXXXRKTR 687
           G    K GLI KT ERC+SIG G   K +S    P                        R
Sbjct: 10  GKGNKKIGLITKTWERCKSIGGGHKSKSYSSSVTPTT------RRSKSWPGLPRGEENRR 63

Query: 688 RQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMF 867
           ++V PEGCFSVYVG Q QRFVIKT+  NHPLFKMLLEEAE EYG++C+GPL LPC+VD+F
Sbjct: 64  KKVAPEGCFSVYVGPQMQRFVIKTEYANHPLFKMLLEEAESEYGYSCQGPLALPCNVDVF 123

Query: 868 YTVLSEIDGDEIRPGCAFAKGYGSYHLVSPSRLVAV 975
           Y VL E+D +    GC F +   SYHL+SPSR++ +
Sbjct: 124 YKVLMEMDNEAPLQGCTFGRSRSSYHLLSPSRMIVL 159


>ref|XP_002299329.1| SAUR family protein [Populus trichocarpa]
           gi|222846587|gb|EEE84134.1| SAUR family protein [Populus
           trichocarpa]
          Length = 160

 Score =  147 bits (372), Expect = 5e-33
 Identities = 84/154 (54%), Positives = 100/154 (64%), Gaps = 7/154 (4%)
 Frame = +1

Query: 520 KGKT--GLINKTLERCRSIGSGGGKKFSRRPLPIDFTXXXXXXXXXXXXXXXXXRKTR-R 690
           KGKT   LI KT ERC+SIG G  K+ SR    +                    + +R R
Sbjct: 7   KGKTEGNLIIKTWERCKSIGRGS-KRTSRLVRSLTPKSKSYPHIKVSLEDDHDRKHSRQR 65

Query: 691 QVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMFY 870
           +V PEGCFSVYVG Q+QRFVIKT+  NHPLFKMLLEEAE EYG++ EGPL LPC+VD+FY
Sbjct: 66  RVAPEGCFSVYVGPQKQRFVIKTEYANHPLFKMLLEEAESEYGYSSEGPLTLPCNVDIFY 125

Query: 871 TVLSEID----GDEIRPGCAFAKGYGSYHLVSPS 960
            VL  ++     D+I  GC FAK YGSYHL+SPS
Sbjct: 126 RVLMAVEDTNIDDKIHLGCGFAKNYGSYHLLSPS 159


>ref|XP_002303770.1| SAUR family protein [Populus trichocarpa]
           gi|222841202|gb|EEE78749.1| SAUR family protein [Populus
           trichocarpa]
          Length = 167

 Score =  147 bits (372), Expect = 5e-33
 Identities = 82/163 (50%), Positives = 102/163 (62%), Gaps = 6/163 (3%)
 Frame = +1

Query: 511 GNPKGKTGLINKTLERCRSIGSGGGK--KFSRRPLPIDFTXXXXXXXXXXXXXXXXXRKT 684
           G  K K  LI KT ERC S G G  +  +  R   P   +                 RK+
Sbjct: 6   GKGKFKGNLIIKTWERCISFGRGSKRTSRLERSLTPKSKSCPHIKVSLEDDHDQKHSRKS 65

Query: 685 RRQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDM 864
           R  V PEGCFSVYVG Q+QRFVIKT+  NHPLFK+LLEEAE EYG+N EGPL LPC+VD+
Sbjct: 66  R--VAPEGCFSVYVGPQKQRFVIKTEYANHPLFKILLEEAESEYGYNPEGPLTLPCNVDI 123

Query: 865 FYTVLSEID----GDEIRPGCAFAKGYGSYHLVSPSRLVAVGR 981
           FY VL  ++     ++I  GC+FAK YGSYHL+SPSR++ + +
Sbjct: 124 FYKVLMAMEDTGIDNKIHRGCSFAKNYGSYHLLSPSRMIVLNQ 166


>gb|AFK33528.1| unknown [Lotus japonicus]
          Length = 171

 Score =  144 bits (363), Expect = 5e-32
 Identities = 83/170 (48%), Positives = 102/170 (60%), Gaps = 8/170 (4%)
 Frame = +1

Query: 502 KEAGNPKGKTGLINKTLERCRSIGSGGGKKFSRRPLPIDFTXXXXXXXXXXXXXXXXXRK 681
           K AG+ KG   LI KT ERC+SIG G   + +R                          K
Sbjct: 21  KAAGSKKGS--LITKTWERCKSIGRGTTTRITRSK------------------SWPSRGK 60

Query: 682 TRRQVVPEGCFSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVD 861
           +   V PEGCFSVYVG Q QRFVIKT+ +NHPLFKMLLEEAE EYG++ +GP+VLPC+VD
Sbjct: 61  STTVVAPEGCFSVYVGQQMQRFVIKTEYVNHPLFKMLLEEAESEYGYSSQGPIVLPCNVD 120

Query: 862 MFYTVLSEIDGDEIRP------GCAFAK--GYGSYHLVSPSRLVAVGRVR 987
           +FY VL E+D +   P      GCAF K     SYHL SPSR++A+  +R
Sbjct: 121 VFYKVLMEMDEETSTPDQPQPHGCAFVKQRSRSSYHLPSPSRMLAINHLR 170


>ref|XP_003631359.1| PREDICTED: uncharacterized protein LOC100854260 [Vitis vinifera]
          Length = 153

 Score =  137 bits (345), Expect = 6e-30
 Identities = 71/149 (47%), Positives = 93/149 (62%), Gaps = 1/149 (0%)
 Frame = +1

Query: 532 GLINKTLERCRSIGSGGGKKFSRRPLPIDFTXXXXXXXXXXXXXXXXXRKTRRQVVPEGC 711
           GLI KT  RC+S   G   +   R      +                 R  + +V PEGC
Sbjct: 2   GLIKKTWNRCKSFSHGRSSENIPRAPKKSKSWPRITAAAAAASLEDDKRVKKGRVAPEGC 61

Query: 712 FSVYVGIQRQRFVIKTDCINHPLFKMLLEEAELEYGHNCEGPLVLPCDVDMFYTVLSEID 891
           FSVYVG ++QRFVIKT+  NHPLFK+LLEEAELEYG+N EGPL LPC+V++F+ VL E+D
Sbjct: 62  FSVYVGPEKQRFVIKTEYANHPLFKILLEEAELEYGYNSEGPLALPCNVEIFHKVLLEMD 121

Query: 892 -GDEIRPGCAFAKGYGSYHLVSPSRLVAV 975
             D+I  GC F + + SY L+SPS ++A+
Sbjct: 122 SSDKIHQGCTFPRSHSSYRLLSPSPMIAM 150


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