BLASTX nr result
ID: Coptis21_contig00001742
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001742
(2085 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [... 352 e-162
emb|CBI21907.3| unnamed protein product [Vitis vinifera] 314 e-152
ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|2... 333 e-149
emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera] 352 e-140
ref|XP_003540944.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 300 e-138
>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
Length = 450
Score = 352 bits (904), Expect(3) = e-162
Identities = 198/328 (60%), Positives = 240/328 (73%), Gaps = 5/328 (1%)
Frame = +2
Query: 830 RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNT 1009
RYAVQSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARVTAASNI+N
Sbjct: 137 RYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNINN- 195
Query: 1010 MNTGNMNYHLMGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNPISN 1189
G +NYH MGTS SM QHFSSIFKPISSN+E DQTR GLSLWM QGS+ +
Sbjct: 196 ---GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGLSLWMGQGSQGHETMGT 252
Query: 1190 NLQELHQMASGNSV-TVYSDPFAACSNPQQSDHHQLNWMYGNKLSSTNAGE--LTSTSLP 1360
NLQE+HQ+ S S +VY+DP +CSNP S +QL+W++G+K SS N + +STSLP
Sbjct: 253 NLQEIHQLRSSMSPGSVYADPLVSCSNPPPSS-YQLSWVFGSKQSSNNTEDQLTSSTSLP 311
Query: 1361 IGHNIKEVPSPHLVSAP-LFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGSS 1537
+ N+KE +VS P L+S+ H QT NMSATALLQKAAQ+GATS DP FLG S
Sbjct: 312 LS-NVKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQKAAQMGATSADP-FLG-S 367
Query: 1538 IGIKSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHPTKRSRIPKD 1717
G+K +++ VQDGNK+ L++ N N D EN D +++NQLQ +P KR D
Sbjct: 368 FGLKCDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLSTFNQLQMYPAKRRNTQND 422
Query: 1718 DTEGEQTRDFLGVGVRTMC-STSMDGWM 1798
D+ G QTRDFLGVGV+T+C +S++GWM
Sbjct: 423 DSTGGQTRDFLGVGVQTICHPSSINGWM 450
Score = 153 bits (386), Expect(3) = e-162
Identities = 73/83 (87%), Positives = 75/83 (90%)
Frame = +2
Query: 260 MAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICG 439
MA EAIPNGF QN + GSNPP KKKRNLPG PDPEAEVIALSPKTLMATNRFLCEICG
Sbjct: 1 MAAEAIPNGFIQNPIG-GSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEICG 59
Query: 440 KGFQRDQNLQLHRRGHNLPWKLR 508
KGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 60 KGFQRDQNLQLHRRGHNLPWKLK 82
Score = 118 bits (295), Expect(3) = e-162
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +1
Query: 577 PWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 735
PWKL+QR+SKEP+KRVYVCPEK+CVHHHPSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 78 PWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 130
>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 314 bits (804), Expect(3) = e-152
Identities = 183/325 (56%), Positives = 219/325 (67%), Gaps = 2/325 (0%)
Frame = +2
Query: 830 RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNT 1009
RYAVQSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARVTAASNI+N
Sbjct: 141 RYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNINN- 199
Query: 1010 MNTGNMNYHLMGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNPISN 1189
G +NYH MGTS SM QHFSSIFKPISSN+E DQTR GLSLWM QGS+ +
Sbjct: 200 ---GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGLSLWMGQGSQGHETMGT 256
Query: 1190 NLQELHQMASGNSVTVYSDPFAACSNPQQSDHHQLNWMYGNKLSSTNAGELTSTSLPIGH 1369
NLQE+HQ+ S S G+ ++T +STSLP+
Sbjct: 257 NLQEIHQLRSSMSP-------------------------GSSSNNTEDQLTSSTSLPLS- 290
Query: 1370 NIKEVPSPHLVSAP-LFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGSSIGI 1546
N+KE +VS P L+S+ H QT NMSATALLQKAAQ+GATS DP FLG S G+
Sbjct: 291 NVKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQKAAQMGATSADP-FLG-SFGL 347
Query: 1547 KSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHPTKRSRIPKDDTE 1726
K +++ VQDGNK+ L++ N N D EN D +++NQLQ +P KR DD+
Sbjct: 348 KCDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLSTFNQLQMYPAKRRNTQNDDST 402
Query: 1727 GEQTRDFLGVGVRTMC-STSMDGWM 1798
G QTRDFLGVGV+T+C +S++GWM
Sbjct: 403 GGQTRDFLGVGVQTICHPSSINGWM 427
Score = 157 bits (397), Expect(3) = e-152
Identities = 75/87 (86%), Positives = 78/87 (89%)
Frame = +2
Query: 248 MLENMAGEAIPNGFTQNSVVVGSNPPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 427
ML+ MA EAIPNGF QN + GSNPP KKKRNLPG PDPEAEVIALSPKTLMATNRFLC
Sbjct: 1 MLQKMAAEAIPNGFIQNPIG-GSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLC 59
Query: 428 EICGKGFQRDQNLQLHRRGHNLPWKLR 508
EICGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 60 EICGKGFQRDQNLQLHRRGHNLPWKLK 86
Score = 118 bits (295), Expect(3) = e-152
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +1
Query: 577 PWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 735
PWKL+QR+SKEP+KRVYVCPEK+CVHHHPSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 82 PWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 134
>ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|222837307|gb|EEE75686.1|
predicted protein [Populus trichocarpa]
Length = 479
Score = 333 bits (854), Expect(3) = e-149
Identities = 201/337 (59%), Positives = 243/337 (72%), Gaps = 14/337 (4%)
Frame = +2
Query: 830 RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNT 1009
RYAVQSDWKAHSKTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARV A S+I+N
Sbjct: 150 RYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVNAVSSINN- 208
Query: 1010 MNTGNMNYHLMGTSHGASMVQHFSSIFKPISSNNETIDQTRP-GLSLWMDQG-SRVGNPI 1183
+ G++NYHLMG G +M QHFSSIFKPISSN+ QTR G+SLWM+QG +V +
Sbjct: 209 LTAGSINYHLMGNPLGPNMAQHFSSIFKPISSNDH---QTRQGGVSLWMNQGVPQVSEAL 265
Query: 1184 -SNNLQELHQMASGNSV-TVYSDPFA-ACSNPQQSDHHQLNW-MYGNKLSSTNA-GELTS 1348
NN+QE+HQ+ S NS ++ D A +CS+ SDH+Q NW ++GNK+SS NA ELTS
Sbjct: 266 MGNNIQEIHQLRSANSSGAMFGDLLAVSCSHAPPSDHYQFNWPVFGNKISSNNAHEELTS 325
Query: 1349 TSLPIGHNIKE-VPSPHLVSAP-LFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPS 1522
T + N+KE + L S P L+ST Q QTTSANMSATALLQKAAQIGATSTDPS
Sbjct: 326 TLVLPLTNVKEAAAASQLASVPSLYSTQQQQSHQTTSANMSATALLQKAAQIGATSTDPS 385
Query: 1523 FLGSSIGIKSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGD-FASWNQLQTHPTKR 1699
FLG S +KSN VQDGNK+ L+ + S N +D ENS D +S NQLQ +P KR
Sbjct: 386 FLG-SFALKSNAKKVQDGNKF-CGLYGSSPVSTNPASDVENSGSDQISSLNQLQMYP-KR 442
Query: 1700 SRI---PKDDTEGEQTRDFLGVGVRTMC-STSMDGWM 1798
+I +D G QTRDFLGVGV+ +C +S++GW+
Sbjct: 443 QKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI 479
Score = 131 bits (329), Expect(3) = e-149
Identities = 66/85 (77%), Positives = 68/85 (80%), Gaps = 9/85 (10%)
Frame = +2
Query: 281 NGFTQNSVVVGSNPPITKKKRNLPGNPD---------PEAEVIALSPKTLMATNRFLCEI 433
NGF +N V GSNPP KKKRNLPG P PEAEVIALSPKTLMATNRFLCEI
Sbjct: 12 NGFVENPVG-GSNPPALKKKRNLPGTPGKLEASFYSYPEAEVIALSPKTLMATNRFLCEI 70
Query: 434 CGKGFQRDQNLQLHRRGHNLPWKLR 508
CGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 71 CGKGFQRDQNLQLHRRGHNLPWKLK 95
Score = 116 bits (290), Expect(3) = e-149
Identities = 49/53 (92%), Positives = 52/53 (98%)
Frame = +1
Query: 577 PWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 735
PWKL+QRT+KE KKRVYVCPEK+CVHHHPSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 91 PWKLKQRTNKEVKKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 143
>emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]
Length = 403
Score = 352 bits (904), Expect(3) = e-140
Identities = 198/328 (60%), Positives = 240/328 (73%), Gaps = 5/328 (1%)
Frame = +2
Query: 830 RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNT 1009
RYAVQSDWKAH+KTCGTREY+CDCGTLFSRRDSFITHRAFCDALAEETARVTAASNI+N
Sbjct: 90 RYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNINN- 148
Query: 1010 MNTGNMNYHLMGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNPISN 1189
G +NYH MGTS SM QHFSSIFKPISSN+E DQTR GLSLWM QGS+ +
Sbjct: 149 ---GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTRRGLSLWMGQGSQGHETMGT 205
Query: 1190 NLQELHQMASGNSV-TVYSDPFAACSNPQQSDHHQLNWMYGNKLSSTNAGE--LTSTSLP 1360
NLQE+HQ+ S S +VY+DP +CSNP S +QL+W++G+K SS N + +STSLP
Sbjct: 206 NLQEIHQLRSSMSPGSVYADPLVSCSNPPPSS-YQLSWVFGSKQSSNNTEDQLTSSTSLP 264
Query: 1361 IGHNIKEVPSPHLVSAP-LFSTHLQPHQQTTSANMSATALLQKAAQIGATSTDPSFLGSS 1537
+ N+KE +VS P L+S+ H QT NMSATALLQKAAQ+GATS DP FLG S
Sbjct: 265 LS-NVKEAAGSQIVSVPSLYSSQHHSH-QTPLGNMSATALLQKAAQMGATSADP-FLG-S 320
Query: 1538 IGIKSNNNYVQDGNKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHPTKRSRIPKD 1717
G+K +++ VQDGNK+ L++ N N D EN D +++NQLQ +P KR D
Sbjct: 321 FGLKCDSSLVQDGNKF-CGLYTANQLPTN---DMENP-KDLSTFNQLQMYPAKRRNTQND 375
Query: 1718 DTEGEQTRDFLGVGVRTMC-STSMDGWM 1798
D+ G QTRDFLGVGV+T+C +S++GWM
Sbjct: 376 DSTGGQTRDFLGVGVQTICHPSSINGWM 403
Score = 118 bits (295), Expect(3) = e-140
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +1
Query: 577 PWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 735
PWKL+QR+SKEP+KRVYVCPEK+CVHHHPSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 31 PWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 83
Score = 80.1 bits (196), Expect(3) = e-140
Identities = 34/35 (97%), Positives = 35/35 (100%)
Frame = +2
Query: 404 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLR 508
MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 1 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 35
>ref|XP_003540944.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein MAGPIE-like
[Glycine max]
Length = 466
Score = 300 bits (769), Expect(3) = e-138
Identities = 179/337 (53%), Positives = 234/337 (69%), Gaps = 15/337 (4%)
Frame = +2
Query: 830 RYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAEETARVTAASNISNT 1009
RYAVQSDWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDALAEETARV AAS+I NT
Sbjct: 146 RYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASDI-NT 204
Query: 1010 MNTGNMNYHLMGTSHGASMVQHFSSIFKPISSNNETIDQTRPGLSLWMDQGSRVGNP--I 1183
GN+ Y++MGTS G +M HF SIFKPISS +ET +QT GL LWM Q S +
Sbjct: 205 SLGGNIGYNIMGTSLGPNMATHFPSIFKPISSTDETSNQTSRGLPLWMGQTSSQAQETMV 264
Query: 1184 SNNLQELHQM--ASGNSVTVY-SDPFAACSNPQQSDHHQLNWMYGNKLS-STNAGEL--- 1342
+ N +E+HQ+ A+ +S T+Y + SN S+++QL+W++G K+S S+N EL
Sbjct: 265 NTNFREIHQLGSATSSSGTMYGGNSILQYSNLPPSNNYQLSWVFGTKISNSSNNQELTTN 324
Query: 1343 --TSTSLPIGHNIKEVPSPHLVSAPLFSTHLQPHQQTTSANMSATALLQKAAQIGATSTD 1516
T+TSLPIG++ VPS L+ + QP Q +SANMSATALLQKAAQIGATS+D
Sbjct: 325 TTTTTSLPIGNS--SVPS-------LYCSQHQPQQTCSSANMSATALLQKAAQIGATSSD 375
Query: 1517 PSFLGSSIGIKSNNNYVQDG--NKYNNALFSLNATSDNIRTDQENSIGDFASWNQLQTHP 1690
PS+LG S+G+K N+ QDG NKY++ ++ + + ++ +NS + + Q HP
Sbjct: 376 PSWLG-SLGLKCGNSQGQDGNNNKYSD-MYGSSLVLTTLGSEADNSACELS-----QMHP 428
Query: 1691 TKRSRIPKDDTEGEQTRDFLGVGVR-TMCST-SMDGW 1795
KR + +++ G QTRDFLGVGV+ T+C T S+ GW
Sbjct: 429 HKRRHVLNEESGGGQTRDFLGVGVQXTICHTSSIKGW 465
Score = 130 bits (328), Expect(3) = e-138
Identities = 63/87 (72%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 ENMAGEAIPNGFTQNSVVVGSN--PPITKKKRNLPGNPDPEAEVIALSPKTLMATNRFLC 427
E M A P T ++ N PP K+KRNLPGNPDPEA+VIALSPKTLMATNRFLC
Sbjct: 5 EIMTNIAFPQNLTASAASSDHNNPPPSLKRKRNLPGNPDPEAQVIALSPKTLMATNRFLC 64
Query: 428 EICGKGFQRDQNLQLHRRGHNLPWKLR 508
E CGKGFQRDQNLQLHRRGHNLPWKL+
Sbjct: 65 ETCGKGFQRDQNLQLHRRGHNLPWKLK 91
Score = 112 bits (281), Expect(3) = e-138
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = +1
Query: 577 PWKLRQRTSKEPKKRVYVCPEKSCVHHHPSRALGDLTGIKKHFCRKHGEKKWK 735
PWKL+QRT KE +KRVYVCPEKSCVHH PSRALGDLTGIKKHFCRKHGEKKWK
Sbjct: 87 PWKLKQRTGKEARKRVYVCPEKSCVHHDPSRALGDLTGIKKHFCRKHGEKKWK 139