BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001734
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   143   7e-32
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]   143   7e-32
ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   134   3e-29
ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
ref|XP_002514028.1| conserved hypothetical protein [Ricinus comm...   103   5e-20

>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
            vinifera]
          Length = 1213

 Score =  143 bits (360), Expect = 7e-32
 Identities = 110/287 (38%), Positives = 146/287 (50%), Gaps = 9/287 (3%)
 Frame = -1

Query: 977  VKPVELEKVLSKGAYMLLYARCSPRAPSLIRNKIMSSSG---ISKDRSRLPET---LRPN 816
            VKPVELE+VL+KGAYMLLYARCSPRAP LIRN ++  +     +  R+ +  T   LR +
Sbjct: 933  VKPVELERVLTKGAYMLLYARCSPRAPRLIRNAVIPRNRKLEAASSRNIVKNTTFKLRHD 992

Query: 815  YTVSSATPYTVPRRAEDYPDWTTLDGPTXXXXXXXXXXXFHPMHRIPEVXXXXXXXXXXX 636
               S+A    +  +   Y   + +D P            F    RI E            
Sbjct: 993  SIDSTAGQSMIHSKPTAYHSRSPVDCPASFESFYSEETRFPWKQRIVEADSSSDNSSLFT 1052

Query: 635  XXDEGSCSTESTRDSASTDDLSDHHLFGEAGRNWNSPSRVLEDSDGSSPFS--RFSQFAV 462
               EGSCSTES RDS ST+DLSD ++FG +GR W+SP     DSD SS  S  R S  A 
Sbjct: 1053 E--EGSCSTESNRDSTSTEDLSD-YIFGYSGRGWSSPWTNSSDSDTSSSSSSLRSSPLAE 1109

Query: 461  SERHASGFSETSGYTPPEADLEFETNGVYSVQSQNNGRRIQGWQNNGSLPILHSDTSKHS 282
              R++S  +ETS     +A L  E +G ++ +  N   ++   +  G +P L SD +K  
Sbjct: 1110 LNRYSSCSTETSHSQTDKAKLVMEGDGFWA-RPPNGSSKLVDMEGKGDIPFLLSDIAKPC 1168

Query: 281  RNLTXXXXXXXXXXXSFRETDMERLGWGNPFD-VNSGVSQRRSTRER 144
            R L              +ETD E++G  NP D +  GV  RRSTRER
Sbjct: 1169 RKLVSNSSSDSYC----KETDKEKVGRVNPLDSMKLGVPSRRSTRER 1211


>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
          Length = 1225

 Score =  143 bits (360), Expect = 7e-32
 Identities = 110/287 (38%), Positives = 146/287 (50%), Gaps = 9/287 (3%)
 Frame = -1

Query: 977  VKPVELEKVLSKGAYMLLYARCSPRAPSLIRNKIMSSSG---ISKDRSRLPET---LRPN 816
            VKPVELE+VL+KGAYMLLYARCSPRAP LIRN ++  +     +  R+ +  T   LR +
Sbjct: 945  VKPVELERVLTKGAYMLLYARCSPRAPRLIRNAVIPRNRKLEAASSRNIVKNTTFKLRHD 1004

Query: 815  YTVSSATPYTVPRRAEDYPDWTTLDGPTXXXXXXXXXXXFHPMHRIPEVXXXXXXXXXXX 636
               S+A    +  +   Y   + +D P            F    RI E            
Sbjct: 1005 SIDSTAGQSMIHSKPTAYHSRSPVDCPASFESFYSEETRFPWKQRIVEADSSSDNSSLFT 1064

Query: 635  XXDEGSCSTESTRDSASTDDLSDHHLFGEAGRNWNSPSRVLEDSDGSSPFS--RFSQFAV 462
               EGSCSTES RDS ST+DLSD ++FG +GR W+SP     DSD SS  S  R S  A 
Sbjct: 1065 E--EGSCSTESNRDSTSTEDLSD-YIFGYSGRGWSSPWTNSSDSDTSSSSSSLRSSPLAE 1121

Query: 461  SERHASGFSETSGYTPPEADLEFETNGVYSVQSQNNGRRIQGWQNNGSLPILHSDTSKHS 282
              R++S  +ETS     +A L  E +G ++ +  N   ++   +  G +P L SD +K  
Sbjct: 1122 LNRYSSCSTETSHSQTDKAKLVMEGDGFWA-RPPNGSSKLVDMEGKGDIPFLLSDIAKPC 1180

Query: 281  RNLTXXXXXXXXXXXSFRETDMERLGWGNPFD-VNSGVSQRRSTRER 144
            R L              +ETD E++G  NP D +  GV  RRSTRER
Sbjct: 1181 RKLVSNSSSDSYC----KETDKEKVGRVNPLDSMKLGVPSRRSTRER 1223


>ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
            vinifera]
          Length = 942

 Score =  134 bits (337), Expect = 3e-29
 Identities = 110/293 (37%), Positives = 140/293 (47%), Gaps = 9/293 (3%)
 Frame = -1

Query: 977  VKPVELEKVLSKGAYMLLYARCSPRAPSLIRNKIMSSSGISKDRS--RLPETL-----RP 819
            V PVEL++VL +GAYMLLYAR SP+ P+L RN  +S  G  K R+   +P +L     R 
Sbjct: 679  VTPVELDRVLLEGAYMLLYARRSPKPPALSRNMAVSHEGKLKMRNLEAVPSSLAATKPRS 738

Query: 818  NYTVSSATPYTVPRRAEDYPDWTTLDGPTXXXXXXXXXXXFHPMHRIPEV-XXXXXXXXX 642
            N  V       + R+ E+   WTT DGPT            H M R+  V          
Sbjct: 739  NSAVPGVDRSMIQRKLEN-SCWTTWDGPTSNQWLRPEDWRSHSMQRVGVVDSSSESSSLF 797

Query: 641  XXXXDEGSCSTESTRDSASTDDLSDHHLFGEAGRNWNSPSRVLEDSD-GSSPFSRFSQFA 465
                DEGSCSTEST DSAST D SD ++FGE G +W     +  DSD   S FSR     
Sbjct: 798  SCCSDEGSCSTESTNDSASTGDFSD-YIFGEVGNSWYRNYGLSSDSDITPSLFSR----- 851

Query: 464  VSERHASGFSETSGYTPPEADLEFETNGVYSVQSQNNGRRIQGWQNNGSLPILHSDTSKH 285
                  SG S ++G       L          Q  + G  ++G    G+   L++ TSKH
Sbjct: 852  -----PSGSSRSNGGDGVRRRLPH--------QGSSWGEELEG---EGNSSFLYNGTSKH 895

Query: 284  SRNLTXXXXXXXXXXXSFRETDMERLGWGNPFDVNSGVSQRRSTRERIVQTFY 126
            S+  T              ETD+ RL  G P DV SGV  +R++RER  QTFY
Sbjct: 896  SKMCTTQFGGSS------SETDLGRLVAGKPIDVKSGVPFKRASRERSAQTFY 942


>ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|222842817|gb|EEE80364.1|
            predicted protein [Populus trichocarpa]
          Length = 1095

 Score =  108 bits (271), Expect = 1e-21
 Identities = 102/285 (35%), Positives = 134/285 (47%), Gaps = 7/285 (2%)
 Frame = -1

Query: 977  VKPVELEKVLSKGAYMLLYARCSPRAPSLIRNKIMSSSGISKDRSRLPETLRPNYTVSSA 798
            V  VELE+VLSKGAYMLLYARCSPRAP LIR++I+SS   +K     P  ++   T  ++
Sbjct: 842  VTAVELERVLSKGAYMLLYARCSPRAPRLIRSRIISSDPKNKCS---PSKIKATNTALNS 898

Query: 797  TPYTVPRRAEDYPDWTTLDGPTXXXXXXXXXXXFHPMHRIPEV-XXXXXXXXXXXXXDEG 621
               ++    + +PD    D               H + RI E               DE 
Sbjct: 899  RSMSMQSSVQSHPDSIPSDN---LASVESFYLKLHRLLRISEEDSSSDNFSFTSGNSDEA 955

Query: 620  SCSTESTRDSASTDDLSDHHLFGEAGRNWNSPSRVLEDSDGSSP----FSRFSQFAVSER 453
            SCST+ST DS STDDLSD ++FG    +WNS  R   DSD SS     +SR+S  A   +
Sbjct: 956  SCSTDSTHDSTSTDDLSD-YIFG----SWNS-WRNTSDSDTSSSSSPLYSRYSPHADKNQ 1009

Query: 452  HAS-GFSETSGYTPPEADLEFETNGVYSVQSQNNGRRIQGWQNNGSLPILHSDTSKHSRN 276
            + S  +S   G      DL        S +  + GR++   +       LH DT++  R 
Sbjct: 1010 NDSHAYSRIGG-----PDL--------SDRIPSGGRKLVDLEGKRGNSFLHPDTTEQCRK 1056

Query: 275  LTXXXXXXXXXXXSFRETDMERLGWGNPF-DVNSGVSQRRSTRER 144
            L              R+    +LG  NP  DV SGVS RRS  ER
Sbjct: 1057 LPSSNSC--------RDKVSTKLGSLNPLNDVKSGVSFRRSVSER 1093


>ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
            gi|223547114|gb|EEF48611.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1060

 Score =  103 bits (258), Expect = 5e-20
 Identities = 106/281 (37%), Positives = 127/281 (45%), Gaps = 3/281 (1%)
 Frame = -1

Query: 977  VKPVELEKVLSKGAYMLLYARCSPRAPSLIRNKIMSSSGISK-DRSRL-PETLRPNYTVS 804
            V  VELE+VL+KGAYMLLYARCSPRAP LIRN+I SS    K   SR+  +    N   S
Sbjct: 807  VTAVELERVLTKGAYMLLYARCSPRAPRLIRNRIASSDPKMKGSASRVSAKNTALNSRSS 866

Query: 803  SATPYTVPRRAEDYPDWTTLDGPTXXXXXXXXXXXFHPMHRI-PEVXXXXXXXXXXXXXD 627
            S  P  V      +P       P            FH + RI  E              D
Sbjct: 867  STHPNVVRFNPNSFP-------PENMTSVESFYLKFHHLQRILEEDSSSDNYSFTSSNSD 919

Query: 626  EGSCSTESTRDSASTDDLSDHHLFGEAGRNWNSPSRVLEDSDGSSPFSRFSQFAVSERHA 447
            EGSCSTESTRDS STDDLSD  +FG     WNS  +   DSD SS  S  S   +  RH 
Sbjct: 920  EGSCSTESTRDSTSTDDLSD-FIFG----GWNS-WKSTSDSDTSSSSSSSSSSPLYTRH- 972

Query: 446  SGFSETSGYTPPEADLEFETNGVYSVQSQNNGRRIQGWQNNGSLPILHSDTSKHSRNLTX 267
               SE S   P  AD   E +G +  +      R+   +  G       DT K  R L  
Sbjct: 973  --LSEMSRSQPDCADSSME-DGTWD-RLPRESSRVVDLEVKGGDTFSCCDTGKECRKL-- 1026

Query: 266  XXXXXXXXXXSFRETDMERLGWGNPFDVNSGVSQRRSTRER 144
                      S RE +  ++G  +   V SGV+ RRS  +R
Sbjct: 1027 ------GSSGSCREANSAKVGVNS---VKSGVTFRRSMSQR 1058