BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001712
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus ...   622   e-176
ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] re...   613   e-173
ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] re...   611   e-172
ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|2...   606   e-171
ref|NP_001047314.1| Os02g0595500 [Oryza sativa Japonica Group] g...   600   e-169

>ref|XP_002528761.1| isocitrate dehydrogenase, putative [Ricinus communis]
            gi|223531764|gb|EEF33583.1| isocitrate dehydrogenase,
            putative [Ricinus communis]
          Length = 372

 Score =  622 bits (1605), Expect = e-176
 Identities = 313/372 (84%), Positives = 333/372 (89%)
 Frame = +1

Query: 235  MARRTLPLLKQLLNSTKTHTPIPHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 414
            MARR++P+LK+LL+S+   +    +++ RSVTYMPRPGDG PR VTLIPGDGIGPLVTGA
Sbjct: 1    MARRSIPILKKLLSSSNNESTCSRLVSRRSVTYMPRPGDGAPRGVTLIPGDGIGPLVTGA 60

Query: 415  VEQVMEAMHAPVYFERYVVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLNVQL 594
            VEQVMEAMHAPVYFERY VHGDM KVP EV++SI KNKVCLKGGLATP+GGGVSSLNVQL
Sbjct: 61   VEQVMEAMHAPVYFERYEVHGDMKKVPAEVIESIKKNKVCLKGGLATPMGGGVSSLNVQL 120

Query: 595  RKDLDLYASLVNCFNLPGLNTRHENVDIVVVRENTEGEYAGLEHEVVPGVIESLKVITKF 774
            RK+LDLYASLVNCFNLPGL TRHENVDIVV+RENTEGEY+GLEHEVVPGV+ESLKVITKF
Sbjct: 121  RKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKF 180

Query: 775  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 954
            CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN
Sbjct: 181  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 240

Query: 955  CCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASAGNV 1134
            CCMQLVSKPEQFDVMVTPNLYGNLV                    ADHAIFEQGASAGNV
Sbjct: 241  CCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAIFEQGASAGNV 300

Query: 1135 GNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGTSTT 1314
            GNE ++EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV RVISEGKYRTKDLGG S+T
Sbjct: 301  GNEKIVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVERVISEGKYRTKDLGGDSST 360

Query: 1315 QEVVDAVIATLD 1350
            QEVVDAVIA LD
Sbjct: 361  QEVVDAVIAALD 372


>ref|XP_004134829.1| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
            mitochondrial-like [Cucumis sativus]
          Length = 381

 Score =  613 bits (1582), Expect = e-173
 Identities = 312/382 (81%), Positives = 336/382 (87%), Gaps = 10/382 (2%)
 Frame = +1

Query: 235  MARRTLPLLKQLLNSTKTHTPIPHILAT----------RSVTYMPRPGDGTPRAVTLIPG 384
            MARR+LP+LKQLL+ + + +  P +L++          RSVTYMPRPGDG PRAVTLIPG
Sbjct: 1    MARRSLPILKQLLSKSSS-SENPALLSSCFKSSIDAQSRSVTYMPRPGDGAPRAVTLIPG 59

Query: 385  DGIGPLVTGAVEQVMEAMHAPVYFERYVVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVG 564
            DGIGPLVTGAVEQVM+AMHAPVYFE++ +HGDM KVPQEV+DSI KNKVCLKGGL TPVG
Sbjct: 60   DGIGPLVTGAVEQVMDAMHAPVYFEKFEIHGDMKKVPQEVIDSIKKNKVCLKGGLVTPVG 119

Query: 565  GGVSSLNVQLRKDLDLYASLVNCFNLPGLNTRHENVDIVVVRENTEGEYAGLEHEVVPGV 744
            GGVSSLNVQLRK+LDLYASLVNCFNLPGL TRHENVDIVV+RENTEGEY+GLEHEVVPGV
Sbjct: 120  GGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGV 179

Query: 745  IESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPG 924
            +ESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPG
Sbjct: 180  VESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPG 239

Query: 925  IKYNEIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAI 1104
            IKYNE+IVDNCCMQLVSKPEQFDVMVTPNLYGNLV                    ADHA+
Sbjct: 240  IKYNEVIVDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAV 299

Query: 1105 FEQGASAGNVGNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYR 1284
            FEQGASAGNVGNE L+EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV +VI EGKYR
Sbjct: 300  FEQGASAGNVGNERLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKKVIFEGKYR 359

Query: 1285 TKDLGGTSTTQEVVDAVIATLD 1350
            TKDLGG STTQEV+DAVIA+LD
Sbjct: 360  TKDLGGQSTTQEVIDAVIASLD 381


>ref|XP_002265376.2| PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1,
            mitochondrial-like [Vitis vinifera]
          Length = 375

 Score =  611 bits (1575), Expect = e-172
 Identities = 310/375 (82%), Positives = 331/375 (88%), Gaps = 3/375 (0%)
 Frame = +1

Query: 235  MARRTLPLLKQLLNSTKTHTPI---PHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLV 405
            MA RTLP+LKQLL+ + ++            RSVTYMPRPGDG PR VTLIPGDGIGPLV
Sbjct: 1    MAPRTLPILKQLLSKSSSYNTNFIGSRFAPKRSVTYMPRPGDGAPRPVTLIPGDGIGPLV 60

Query: 406  TGAVEQVMEAMHAPVYFERYVVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLN 585
            TGAVEQVM+AMHAPVYFERY VHGDM KVP+EVL+SI KNKVCLKGGLATP+GGGVSSLN
Sbjct: 61   TGAVEQVMDAMHAPVYFERYEVHGDMKKVPEEVLESIRKNKVCLKGGLATPMGGGVSSLN 120

Query: 586  VQLRKDLDLYASLVNCFNLPGLNTRHENVDIVVVRENTEGEYAGLEHEVVPGVIESLKVI 765
            VQLRK+LDLYASLVNCFNLPGL TRH+NVDIVV+RENTEGEY+GLEHEVVPGV+ESLKVI
Sbjct: 121  VQLRKELDLYASLVNCFNLPGLPTRHQNVDIVVIRENTEGEYSGLEHEVVPGVVESLKVI 180

Query: 766  TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEII 945
            TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKY+EII
Sbjct: 181  TKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYSEII 240

Query: 946  VDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASA 1125
            VDNCCMQLVSKPEQFDVMVTPNLYGNLV                    ADHA+FEQGASA
Sbjct: 241  VDNCCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAVFEQGASA 300

Query: 1126 GNVGNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGT 1305
            GNVG++ L+EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV RVISEGKYRTKDLGG 
Sbjct: 301  GNVGHQKLVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISEGKYRTKDLGGD 360

Query: 1306 STTQEVVDAVIATLD 1350
            S+TQE+VDAVIATLD
Sbjct: 361  SSTQEIVDAVIATLD 375


>ref|XP_002310697.1| predicted protein [Populus trichocarpa] gi|222853600|gb|EEE91147.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  606 bits (1563), Expect = e-171
 Identities = 309/372 (83%), Positives = 325/372 (87%)
 Frame = +1

Query: 235  MARRTLPLLKQLLNSTKTHTPIPHILATRSVTYMPRPGDGTPRAVTLIPGDGIGPLVTGA 414
            MARR++P+LK LL S+ T T        RSVTYMPRPGDG PR VTLIPGDGIGPLVT A
Sbjct: 1    MARRSIPVLKHLLTSSSTPT------LRRSVTYMPRPGDGAPRPVTLIPGDGIGPLVTNA 54

Query: 415  VEQVMEAMHAPVYFERYVVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVSSLNVQL 594
            VEQVMEAMHAPVYFE+Y +HGDM++VP EV++SI KNKVCLKGGLATP+GGGVSSLNVQL
Sbjct: 55   VEQVMEAMHAPVYFEKYDIHGDMMRVPSEVIESIKKNKVCLKGGLATPMGGGVSSLNVQL 114

Query: 595  RKDLDLYASLVNCFNLPGLNTRHENVDIVVVRENTEGEYAGLEHEVVPGVIESLKVITKF 774
            RK+LDLYASLVNCFNL GL TRHENVDIVV+RENTEGEYAGLEHEVVPGV+ESLKVITKF
Sbjct: 115  RKELDLYASLVNCFNLQGLPTRHENVDIVVIRENTEGEYAGLEHEVVPGVVESLKVITKF 174

Query: 775  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 954
            CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN
Sbjct: 175  CSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDN 234

Query: 955  CCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQGASAGNV 1134
            CCMQLVSKPEQFDVMVTPNLYGNLV                    ADHAIFEQGASAGNV
Sbjct: 235  CCMQLVSKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGADHAIFEQGASAGNV 294

Query: 1135 GNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDLGGTSTT 1314
            GN+ L+EQK ANPVALLLSSAMMLRHLQFPSFADRLETAV RVISE  YRTKDLGGTSTT
Sbjct: 295  GNDKLLEQKTANPVALLLSSAMMLRHLQFPSFADRLETAVKRVISESHYRTKDLGGTSTT 354

Query: 1315 QEVVDAVIATLD 1350
            QEVVDAVI  LD
Sbjct: 355  QEVVDAVIGALD 366


>ref|NP_001047314.1| Os02g0595500 [Oryza sativa Japonica Group]
            gi|46805298|dbj|BAD16830.1| putative NAD-dependent
            isocitrate dehydrogenase [Oryza sativa Japonica Group]
            gi|81686725|dbj|BAE48301.1| NAD-dependent isocitrate
            dehydrogenase c;2 [Oryza sativa Japonica Group]
            gi|113536845|dbj|BAF09228.1| Os02g0595500 [Oryza sativa
            Japonica Group]
          Length = 378

 Score =  600 bits (1548), Expect = e-169
 Identities = 308/378 (81%), Positives = 329/378 (87%), Gaps = 6/378 (1%)
 Frame = +1

Query: 235  MARRTLPLLKQLLNSTKTHTPIP-HILAT-----RSVTYMPRPGDGTPRAVTLIPGDGIG 396
            MARR+ PLL++LL+ T + +P P H LA      R+VTYMPRPGDG PRAVTLIPGDGIG
Sbjct: 1    MARRSAPLLQRLLSPTPSPSPSPPHPLAAAAVSRRTVTYMPRPGDGAPRAVTLIPGDGIG 60

Query: 397  PLVTGAVEQVMEAMHAPVYFERYVVHGDMVKVPQEVLDSIMKNKVCLKGGLATPVGGGVS 576
            PLVTGAV QVMEAMHAPVYFE Y V GDM  VP EV+DSI +NKVCLKGGLATPVGGGVS
Sbjct: 61   PLVTGAVRQVMEAMHAPVYFESYEVRGDMPTVPPEVIDSIRRNKVCLKGGLATPVGGGVS 120

Query: 577  SLNVQLRKDLDLYASLVNCFNLPGLNTRHENVDIVVVRENTEGEYAGLEHEVVPGVIESL 756
            SLNVQLRK+LDLYASLVNCFNLPGL TRH+NVDIVV+RENTEGEY+GLEHEVVPGV+ESL
Sbjct: 121  SLNVQLRKELDLYASLVNCFNLPGLPTRHDNVDIVVIRENTEGEYSGLEHEVVPGVVESL 180

Query: 757  KVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYN 936
            KVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGI+YN
Sbjct: 181  KVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIQYN 240

Query: 937  EIIVDNCCMQLVSKPEQFDVMVTPNLYGNLVXXXXXXXXXXXXXXXXXXXXADHAIFEQG 1116
            EIIVDNCCMQLV+KPEQFDVMVTPNLYGNLV                     DHA+FEQG
Sbjct: 241  EIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGQDHAVFEQG 300

Query: 1117 ASAGNVGNEMLMEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVMRVISEGKYRTKDL 1296
            ASAGNVGN  ++EQKKANPVALLLSSAMMLRHLQFPSFADRLETAV RVI+EGKYRTKDL
Sbjct: 301  ASAGNVGNVKVVEQKKANPVALLLSSAMMLRHLQFPSFADRLETAVKRVIAEGKYRTKDL 360

Query: 1297 GGTSTTQEVVDAVIATLD 1350
            GG+STTQEV DAVIA LD
Sbjct: 361  GGSSTTQEVTDAVIAHLD 378