BLASTX nr result

ID: Coptis21_contig00001708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001708
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263613.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   198   4e-49
ref|XP_004156955.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ...   195   4e-48
ref|XP_004152125.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   195   4e-48
ref|XP_002303763.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002512638.1| hypothetical protein RCOM_1437660 [Ricinus c...   192   2e-47

>ref|XP_002263613.1| PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Vitis
           vinifera]
          Length = 474

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/115 (76%), Positives = 100/115 (86%), Gaps = 2/115 (1%)
 Frame = -1

Query: 402 GERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSR 223
           GER+PCD+C  +IAVL+CRADSAKLCL CD HVHSAN LSRKHLRSQICDNC++ PVS R
Sbjct: 9   GERVPCDFCSGQIAVLYCRADSAKLCLFCDQHVHSANALSRKHLRSQICDNCSSEPVSVR 68

Query: 222 CVTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKE 64
           C TDN+VLCQECDWDAHG+C  SA+HDR PVEGFSGCPS + L+S WGLDI EK+
Sbjct: 69  CSTDNMVLCQECDWDAHGSCSVSAAHDRKPVEGFSGCPSAVQLSSIWGLDIEEKK 123


>ref|XP_004156955.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein CONSTANS-LIKE
           14-like [Cucumis sativus]
          Length = 490

 Score =  195 bits (495), Expect = 4e-48
 Identities = 83/116 (71%), Positives = 100/116 (86%), Gaps = 2/116 (1%)
 Frame = -1

Query: 402 GERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSR 223
           GE +PCD+C D++A+L+CRADSAKLCL CD HVHSAN LSRKH+RSQICDNC + PVS R
Sbjct: 9   GETVPCDFCNDQVAILYCRADSAKLCLFCDKHVHSANLLSRKHVRSQICDNCRSEPVSIR 68

Query: 222 CVTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKEL 61
           C TDNLVLCQECDWDAHG+C  SA+HDR+P+EGF+GCPS L+L S WG D+ +K+L
Sbjct: 69  CSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFTGCPSALELVSLWGFDLGDKKL 124


>ref|XP_004152125.1| PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Cucumis
           sativus]
          Length = 491

 Score =  195 bits (495), Expect = 4e-48
 Identities = 83/116 (71%), Positives = 100/116 (86%), Gaps = 2/116 (1%)
 Frame = -1

Query: 402 GERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSR 223
           GE +PCD+C D++A+L+CRADSAKLCL CD HVHSAN LSRKH+RSQICDNC + PVS R
Sbjct: 9   GETVPCDFCNDQVAILYCRADSAKLCLFCDKHVHSANLLSRKHVRSQICDNCRSEPVSIR 68

Query: 222 CVTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKEL 61
           C TDNLVLCQECDWDAHG+C  SA+HDR+P+EGF+GCPS L+L S WG D+ +K+L
Sbjct: 69  CSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFTGCPSALELVSLWGFDLGDKKL 124


>ref|XP_002303763.1| predicted protein [Populus trichocarpa] gi|222841195|gb|EEE78742.1|
           predicted protein [Populus trichocarpa]
          Length = 423

 Score =  193 bits (490), Expect = 1e-47
 Identities = 89/134 (66%), Positives = 106/134 (79%), Gaps = 2/134 (1%)
 Frame = -1

Query: 399 ERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSRC 220
           E +PCD+C ++ AVL+CRADSAKLCL CD HVHSAN LSRKH+R+QICDNCN+  VS RC
Sbjct: 10  ETVPCDFCSEQTAVLYCRADSAKLCLFCDQHVHSANLLSRKHVRAQICDNCNSELVSVRC 69

Query: 219 VTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKELLSLVN 46
            TDNLVLCQECDWDAHG+C  SASHDR+ +EGFSGCP+ LDLAS WG D+ EK+      
Sbjct: 70  ATDNLVLCQECDWDAHGSCSVSASHDRTIIEGFSGCPTALDLASIWGFDLEEKK----QE 125

Query: 45  PVRQDMIINSNSNS 4
           P +  M+ N NSN+
Sbjct: 126 PFQDLMVPNENSNN 139


>ref|XP_002512638.1| hypothetical protein RCOM_1437660 [Ricinus communis]
           gi|223548599|gb|EEF50090.1| hypothetical protein
           RCOM_1437660 [Ricinus communis]
          Length = 477

 Score =  192 bits (488), Expect = 2e-47
 Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 2/113 (1%)
 Frame = -1

Query: 399 ERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSRC 220
           ER+PCD+C ++IAVL+CRADSAKLCL CD HVHSAN LSRKH+RSQICDNC+  PV+ RC
Sbjct: 10  ERVPCDFCSEQIAVLYCRADSAKLCLFCDQHVHSANLLSRKHVRSQICDNCSKGPVTVRC 69

Query: 219 VTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEK 67
            TDNLVLCQECDWDAHG+C  SASHDR+PVEG SGCPS L+LAS WG D+ +K
Sbjct: 70  GTDNLVLCQECDWDAHGSCSVSASHDRTPVEGLSGCPSALELASIWGFDLEDK 122


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