BLASTX nr result
ID: Coptis21_contig00001708
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001708 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263613.1| PREDICTED: zinc finger protein CONSTANS-LIKE... 198 4e-49 ref|XP_004156955.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 195 4e-48 ref|XP_004152125.1| PREDICTED: zinc finger protein CONSTANS-LIKE... 195 4e-48 ref|XP_002303763.1| predicted protein [Populus trichocarpa] gi|2... 193 1e-47 ref|XP_002512638.1| hypothetical protein RCOM_1437660 [Ricinus c... 192 2e-47 >ref|XP_002263613.1| PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Vitis vinifera] Length = 474 Score = 198 bits (503), Expect = 4e-49 Identities = 88/115 (76%), Positives = 100/115 (86%), Gaps = 2/115 (1%) Frame = -1 Query: 402 GERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSR 223 GER+PCD+C +IAVL+CRADSAKLCL CD HVHSAN LSRKHLRSQICDNC++ PVS R Sbjct: 9 GERVPCDFCSGQIAVLYCRADSAKLCLFCDQHVHSANALSRKHLRSQICDNCSSEPVSVR 68 Query: 222 CVTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKE 64 C TDN+VLCQECDWDAHG+C SA+HDR PVEGFSGCPS + L+S WGLDI EK+ Sbjct: 69 CSTDNMVLCQECDWDAHGSCSVSAAHDRKPVEGFSGCPSAVQLSSIWGLDIEEKK 123 >ref|XP_004156955.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein CONSTANS-LIKE 14-like [Cucumis sativus] Length = 490 Score = 195 bits (495), Expect = 4e-48 Identities = 83/116 (71%), Positives = 100/116 (86%), Gaps = 2/116 (1%) Frame = -1 Query: 402 GERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSR 223 GE +PCD+C D++A+L+CRADSAKLCL CD HVHSAN LSRKH+RSQICDNC + PVS R Sbjct: 9 GETVPCDFCNDQVAILYCRADSAKLCLFCDKHVHSANLLSRKHVRSQICDNCRSEPVSIR 68 Query: 222 CVTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKEL 61 C TDNLVLCQECDWDAHG+C SA+HDR+P+EGF+GCPS L+L S WG D+ +K+L Sbjct: 69 CSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFTGCPSALELVSLWGFDLGDKKL 124 >ref|XP_004152125.1| PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Cucumis sativus] Length = 491 Score = 195 bits (495), Expect = 4e-48 Identities = 83/116 (71%), Positives = 100/116 (86%), Gaps = 2/116 (1%) Frame = -1 Query: 402 GERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSR 223 GE +PCD+C D++A+L+CRADSAKLCL CD HVHSAN LSRKH+RSQICDNC + PVS R Sbjct: 9 GETVPCDFCNDQVAILYCRADSAKLCLFCDKHVHSANLLSRKHVRSQICDNCRSEPVSIR 68 Query: 222 CVTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKEL 61 C TDNLVLCQECDWDAHG+C SA+HDR+P+EGF+GCPS L+L S WG D+ +K+L Sbjct: 69 CSTDNLVLCQECDWDAHGSCSVSAAHDRTPIEGFTGCPSALELVSLWGFDLGDKKL 124 >ref|XP_002303763.1| predicted protein [Populus trichocarpa] gi|222841195|gb|EEE78742.1| predicted protein [Populus trichocarpa] Length = 423 Score = 193 bits (490), Expect = 1e-47 Identities = 89/134 (66%), Positives = 106/134 (79%), Gaps = 2/134 (1%) Frame = -1 Query: 399 ERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSRC 220 E +PCD+C ++ AVL+CRADSAKLCL CD HVHSAN LSRKH+R+QICDNCN+ VS RC Sbjct: 10 ETVPCDFCSEQTAVLYCRADSAKLCLFCDQHVHSANLLSRKHVRAQICDNCNSELVSVRC 69 Query: 219 VTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEKELLSLVN 46 TDNLVLCQECDWDAHG+C SASHDR+ +EGFSGCP+ LDLAS WG D+ EK+ Sbjct: 70 ATDNLVLCQECDWDAHGSCSVSASHDRTIIEGFSGCPTALDLASIWGFDLEEKK----QE 125 Query: 45 PVRQDMIINSNSNS 4 P + M+ N NSN+ Sbjct: 126 PFQDLMVPNENSNN 139 >ref|XP_002512638.1| hypothetical protein RCOM_1437660 [Ricinus communis] gi|223548599|gb|EEF50090.1| hypothetical protein RCOM_1437660 [Ricinus communis] Length = 477 Score = 192 bits (488), Expect = 2e-47 Identities = 85/113 (75%), Positives = 98/113 (86%), Gaps = 2/113 (1%) Frame = -1 Query: 399 ERIPCDYCGDEIAVLFCRADSAKLCLLCDLHVHSANDLSRKHLRSQICDNCNAAPVSSRC 220 ER+PCD+C ++IAVL+CRADSAKLCL CD HVHSAN LSRKH+RSQICDNC+ PV+ RC Sbjct: 10 ERVPCDFCSEQIAVLYCRADSAKLCLFCDQHVHSANLLSRKHVRSQICDNCSKGPVTVRC 69 Query: 219 VTDNLVLCQECDWDAHGNC--SASHDRSPVEGFSGCPSPLDLASRWGLDISEK 67 TDNLVLCQECDWDAHG+C SASHDR+PVEG SGCPS L+LAS WG D+ +K Sbjct: 70 GTDNLVLCQECDWDAHGSCSVSASHDRTPVEGLSGCPSALELASIWGFDLEDK 122