BLASTX nr result

ID: Coptis21_contig00001684 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001684
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273896.1| PREDICTED: expansin-like B1 [Vitis vinifera]...   358   9e-97
ref|XP_002329557.1| hypothetical protein POPTRDRAFT_783792 [Popu...   345   8e-93
ref|XP_002531220.1| Major pollen allergen Ory s 1 precursor, put...   343   4e-92
ref|XP_002270175.2| PREDICTED: expansin-like B1 [Vitis vinifera]...   331   2e-88
ref|XP_002326673.1| hypothetical protein POPTRDRAFT_589918 [Popu...   330   5e-88

>ref|XP_002273896.1| PREDICTED: expansin-like B1 [Vitis vinifera]
           gi|296088951|emb|CBI38517.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  358 bits (920), Expect = 9e-97
 Identities = 162/238 (68%), Positives = 191/238 (80%), Gaps = 3/238 (1%)
 Frame = -2

Query: 880 LCIMVLLPALCCSQDTYTCSRATFYGSPDCLGTPTGACXXXXXXXXXXXXXXGAVSMLYR 701
           LC +VLLP LC  +DT+T SRAT+YGSPDCLGTPTGAC              GAVS LYR
Sbjct: 12  LCFIVLLPLLCKCEDTFTYSRATYYGSPDCLGTPTGACGFGEYGRSVNGGNVGAVSRLYR 71

Query: 700 NGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELLA 521
           NGTGCGACYQVRC  P LC ++G+K+VVTDHGEGD+TDFILSPRGF+ LARPNMAA+L A
Sbjct: 72  NGTGCGACYQVRCKVPNLCADNGMKVVVTDHGEGDYTDFILSPRGFSMLARPNMAADLFA 131

Query: 520 YGVVDIEYRRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQEW 341
           YGVV IEYRR+ CQYPG N+ FKVHEHSRFP+Y+AI+++YQAG  D+TAV++WQ DCQEW
Sbjct: 132 YGVVGIEYRRVPCQYPGSNIFFKVHEHSRFPDYLAIVMLYQAGLSDITAVDIWQEDCQEW 191

Query: 340 RGMRKAYGGVWDMPNPPVGALNLRFQVN---GEKWIQVSSAIPCDWKAGAAYDSTIQL 176
           +GMRK+YG VWDM NPP G + LRFQV+   G+KW+Q+ + IP DWKAG AYDS  QL
Sbjct: 192 KGMRKSYGAVWDMANPPKGPVGLRFQVSGRGGQKWVQLMNVIPSDWKAGVAYDSAFQL 249


>ref|XP_002329557.1| hypothetical protein POPTRDRAFT_783792 [Populus trichocarpa]
           gi|222870266|gb|EEF07397.1| hypothetical protein
           POPTRDRAFT_783792 [Populus trichocarpa]
          Length = 236

 Score =  345 bits (886), Expect = 8e-93
 Identities = 159/236 (67%), Positives = 186/236 (78%), Gaps = 4/236 (1%)
 Frame = -2

Query: 871 MVLLPALCCSQDTYTCSRATFYGSPDCLGTPTGACXXXXXXXXXXXXXXGAVSMLYRNGT 692
           M LLPA+  SQD YT SRAT+YGSPDCLGTP+GAC                VS LY+NGT
Sbjct: 1   MALLPAISYSQD-YTFSRATYYGSPDCLGTPSGACGFGEYGRTVNDANVAGVSRLYKNGT 59

Query: 691 GCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELLAYGV 512
           GCG CYQVRC  P LCT+DGV +VVTD+GEGD TDFILSPR + ++A PNMA EL+AYGV
Sbjct: 60  GCGGCYQVRCKAPNLCTDDGVNVVVTDYGEGDKTDFILSPRAYARMAHPNMAVELIAYGV 119

Query: 511 VDIEYRRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQEWRGM 332
           VD+E+RRI C+Y GYNLMFKVHEHSRFP+Y+AIIL+YQAGQ ++ AVELWQ DC+EWRGM
Sbjct: 120 VDVEFRRIPCRYSGYNLMFKVHEHSRFPDYLAIILLYQAGQNEILAVELWQEDCKEWRGM 179

Query: 331 RKAYGGVWDMPNPPVGALNLRFQVNGEK----WIQVSSAIPCDWKAGAAYDSTIQL 176
           R+AYG VWDMPNPP GA++LRFQV+G      W Q ++ IP DWKAG AYDST+QL
Sbjct: 180 RRAYGAVWDMPNPPKGAISLRFQVSGSAGVTYWAQAANVIPSDWKAGIAYDSTVQL 235


>ref|XP_002531220.1| Major pollen allergen Ory s 1 precursor, putative [Ricinus
           communis] gi|223529180|gb|EEF31156.1| Major pollen
           allergen Ory s 1 precursor, putative [Ricinus communis]
          Length = 247

 Score =  343 bits (880), Expect = 4e-92
 Identities = 157/239 (65%), Positives = 187/239 (78%), Gaps = 3/239 (1%)
 Frame = -2

Query: 883 VLCIMVLLPALCCSQDTYTCSRATFYGSPDCLGTPTGACXXXXXXXXXXXXXXGAVSMLY 704
           + C++VLLPA+  SQD +T SRAT+YGSPDCLGTPTGAC                VS LY
Sbjct: 9   MFCLVVLLPAIAYSQD-FTGSRATYYGSPDCLGTPTGACGFGEYGRTVNDANVAGVSRLY 67

Query: 703 RNGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELL 524
           +NGTGCG CYQVRC  P++C++DGV +VVTD+GEGD TDFILS R + +LARPNMAAEL 
Sbjct: 68  KNGTGCGGCYQVRCKAPQICSDDGVNVVVTDYGEGDKTDFILSSRAYARLARPNMAAELF 127

Query: 523 AYGVVDIEYRRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQE 344
           AYGVVDIEYRRISC+Y GYN+MFKVHEHSRFPEY+AI+++YQ GQ D+ AV++WQ DC+E
Sbjct: 128 AYGVVDIEYRRISCRYAGYNVMFKVHEHSRFPEYLAIVVLYQGGQNDILAVQIWQEDCKE 187

Query: 343 WRGMRKAYGGVWDMPNPPVGALNLRFQVNGE---KWIQVSSAIPCDWKAGAAYDSTIQL 176
           W GMRKAYG VWDMPNPP G + LRFQV+G     W+Q  +AIP +WK G AYDS IQL
Sbjct: 188 WIGMRKAYGAVWDMPNPPKGYITLRFQVSGSAGLTWVQAKNAIPSEWKVGVAYDSAIQL 246


>ref|XP_002270175.2| PREDICTED: expansin-like B1 [Vitis vinifera]
           gi|296085708|emb|CBI29507.3| unnamed protein product
           [Vitis vinifera]
          Length = 251

 Score =  331 bits (848), Expect = 2e-88
 Identities = 151/238 (63%), Positives = 185/238 (77%), Gaps = 3/238 (1%)
 Frame = -2

Query: 880 LCIMVLLPALCCSQDTYTCSRATFYGSPDCLGTPTGACXXXXXXXXXXXXXXGAVSMLYR 701
           LC++VLLP LC  +D +T SRAT+YG+PD LGTPTGAC              GAVS LYR
Sbjct: 12  LCVIVLLPVLCKCEDAFTYSRATYYGTPDGLGTPTGACGFGEYGRSVNGGNVGAVSRLYR 71

Query: 700 NGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAELLA 521
           +GTGCGACYQVRC  P LC + G+K+VVTDHG GD TDFILS RGF+ LARPN AA+L A
Sbjct: 72  DGTGCGACYQVRCKMPNLCADVGMKVVVTDHGGGDDTDFILSRRGFSMLARPNKAADLFA 131

Query: 520 YGVVDIEYRRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADCQEW 341
           YGVV IEYRR+ CQYPG N+ FKVHE+SRFP+Y+A++++YQAG  D+TAV++WQ D Q W
Sbjct: 132 YGVVGIEYRRVPCQYPGSNIFFKVHENSRFPDYLALVMLYQAGLSDITAVDIWQEDSQAW 191

Query: 340 RGMRKAYGGVWDMPNPPVGALNLRFQVN---GEKWIQVSSAIPCDWKAGAAYDSTIQL 176
           +GMRK++G VWDMPNPP G ++LRFQV+   G+KW+Q+ + IP DWKAG AYDS  QL
Sbjct: 192 KGMRKSHGAVWDMPNPPKGPVSLRFQVSGRRGQKWVQLMNVIPSDWKAGVAYDSNFQL 249


>ref|XP_002326673.1| hypothetical protein POPTRDRAFT_589918 [Populus trichocarpa]
           gi|222833995|gb|EEE72472.1| hypothetical protein
           POPTRDRAFT_589918 [Populus trichocarpa]
          Length = 251

 Score =  330 bits (845), Expect = 5e-88
 Identities = 153/241 (63%), Positives = 185/241 (76%), Gaps = 5/241 (2%)
 Frame = -2

Query: 883 VLCIMV--LLPALCCSQDTYTCSRATFYGSPDCLGTPTGACXXXXXXXXXXXXXXGAVSM 710
           +LC++   LLPA+  SQD YTCSRAT++GSPDCLGTPTGAC                VS 
Sbjct: 11  ILCVVAVALLPAISHSQD-YTCSRATYFGSPDCLGTPTGACGFGGYGRTVNDANVAGVSR 69

Query: 709 LYRNGTGCGACYQVRCTTPKLCTEDGVKLVVTDHGEGDHTDFILSPRGFTQLARPNMAAE 530
           L++NGTGCG CYQVRC    LC++DGV +VVTD+GEGD TDFILS R + ++ARPNMA E
Sbjct: 70  LFKNGTGCGGCYQVRCKASNLCSDDGVNVVVTDYGEGDKTDFILSTRAYARMARPNMALE 129

Query: 529 LLAYGVVDIEYRRISCQYPGYNLMFKVHEHSRFPEYIAIILIYQAGQKDVTAVELWQADC 350
           L AYGVVD+E+RRI C+Y GYNLMFKVHEHSRFPEY+AI+L+YQAGQ ++ AVEL Q DC
Sbjct: 130 LFAYGVVDVEFRRIPCRYNGYNLMFKVHEHSRFPEYLAIVLLYQAGQNEILAVELRQEDC 189

Query: 349 QEWRGMRKAYGGVWDMPNPPVGALNLRFQVNGE---KWIQVSSAIPCDWKAGAAYDSTIQ 179
           +EWRGMR+AYG VWD+PNPP GA++L+ QV G     W+Q  + +P DWKAG AYDS IQ
Sbjct: 190 KEWRGMRRAYGAVWDIPNPPKGAISLKLQVCGSAGVTWVQADNVLPSDWKAGVAYDSAIQ 249

Query: 178 L 176
           L
Sbjct: 250 L 250


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