BLASTX nr result

ID: Coptis21_contig00001683 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001683
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282029.1| PREDICTED: uncharacterized protein LOC100261...   431   e-118
ref|XP_002530342.1| conserved hypothetical protein [Ricinus comm...   428   e-117
ref|XP_004143326.1| PREDICTED: uncharacterized protein LOC101214...   421   e-115
ref|XP_002308463.1| predicted protein [Populus trichocarpa] gi|2...   415   e-113
ref|NP_001242702.1| uncharacterized protein LOC100794571 [Glycin...   412   e-113

>ref|XP_002282029.1| PREDICTED: uncharacterized protein LOC100261394 [Vitis vinifera]
           gi|147792025|emb|CAN62037.1| hypothetical protein
           VITISV_021370 [Vitis vinifera]
           gi|297740143|emb|CBI30325.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  431 bits (1107), Expect = e-118
 Identities = 216/286 (75%), Positives = 238/286 (83%), Gaps = 1/286 (0%)
 Frame = +2

Query: 140 YGKPNLVSFSASNSHSRIVCCSAAENSSDDIPSGDKSSSSFCIIEGPETVQDFVQMQAKE 319
           +G P  +S     S S+I+C S  ++ SD +P GD + S+FCIIEGPETVQDFVQMQ +E
Sbjct: 31  HGNPKRLSLHRRISRSQIICASG-KDFSDPLPDGDTNPSNFCIIEGPETVQDFVQMQVQE 89

Query: 320 IQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVIDEISEE-ADEMPDIPSSIPFLPHVXX 496
           IQDNI SRRNKIFLLMEEVRRLRVQ+RIK  KV DE  EE A+EMPD+PSSIPFLPHV  
Sbjct: 90  IQDNISSRRNKIFLLMEEVRRLRVQQRIKSVKVFDENGEEEANEMPDMPSSIPFLPHVTK 149

Query: 497 XXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTSYDDFIRNMHLPMQLSQVDPIVA 676
                    SFSFIS II+FGGLLAP LELKLG+GGTSY+DFIR+MHLPMQLSQVDPIVA
Sbjct: 150 RTLKQLYLTSFSFISAIIIFGGLLAPTLELKLGLGGTSYEDFIRSMHLPMQLSQVDPIVA 209

Query: 677 SFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSASGVCLSIEPISIARG 856
           SFSGGAVGVISALMLIE NNVEQ EKKRCKYC+G GYL CARCSASGVCLSIEPIS++  
Sbjct: 210 SFSGGAVGVISALMLIEANNVEQHEKKRCKYCNGKGYLPCARCSASGVCLSIEPISVSSA 269

Query: 857 SDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 994
           SDRPL+AP T+RC NCSG GKVMCPTCLCTGMVMASEHD RIDPFD
Sbjct: 270 SDRPLKAPATRRCPNCSGVGKVMCPTCLCTGMVMASEHDPRIDPFD 315


>ref|XP_002530342.1| conserved hypothetical protein [Ricinus communis]
           gi|223530146|gb|EEF32058.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 307

 Score =  428 bits (1101), Expect = e-117
 Identities = 225/300 (75%), Positives = 245/300 (81%), Gaps = 5/300 (1%)
 Frame = +2

Query: 110 FISNNNNHPFYGKPNLVSFSASNSHSRIVCCSAAENSSDDIPSGDKSSSSFCIIEGPETV 289
           FIS NNN     KP         S  R++C S   NSSD +PS D  SS+FCIIEGPETV
Sbjct: 18  FISINNNK---SKPK-----QRISKFRLLCSSPPINSSDSVPSAD--SSNFCIIEGPETV 67

Query: 290 QDFVQMQAKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKR--TKVIDEIS---EEADEMP 454
           QDFVQMQ +EIQDNI+SRRNKIFLLMEEVRRLRVQ+RIKR   K+IDE     E+ DEMP
Sbjct: 68  QDFVQMQLQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKRKTVKIIDETGQKEEDTDEMP 127

Query: 455 DIPSSIPFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTSYDDFIRNM 634
           DIPSSIPFLP V           S SFISGIIVFGGL+AP LELKLGIGGTSY+DFI ++
Sbjct: 128 DIPSSIPFLPRVTPKTLKQLYLTSLSFISGIIVFGGLIAPTLELKLGIGGTSYEDFICSL 187

Query: 635 HLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLACARCSAS 814
           HLP+QLSQVDPIVASFSGGAVGVISALMLIE NNVEQQEKKRCKYCHGTGYLACARCSAS
Sbjct: 188 HLPLQLSQVDPIVASFSGGAVGVISALMLIEANNVEQQEKKRCKYCHGTGYLACARCSAS 247

Query: 815 GVCLSIEPISIARGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHDLRIDPFD 994
           GVCLSI+PIS++  SD+PLR PTTQRCINCSGAGKVMCPTCLCTGM+MASEHD RI+PFD
Sbjct: 248 GVCLSIDPISLSSISDQPLRVPTTQRCINCSGAGKVMCPTCLCTGMLMASEHDPRIEPFD 307


>ref|XP_004143326.1| PREDICTED: uncharacterized protein LOC101214251 [Cucumis sativus]
           gi|449508430|ref|XP_004163310.1| PREDICTED:
           uncharacterized LOC101214251 [Cucumis sativus]
          Length = 324

 Score =  421 bits (1081), Expect = e-115
 Identities = 208/269 (77%), Positives = 231/269 (85%), Gaps = 2/269 (0%)
 Frame = +2

Query: 194 VCCSAAENSSDDIPS-GDKSSSSFCIIEGPETVQDFVQMQAKEIQDNIKSRRNKIFLLME 370
           +C S+++ +S  +PS  D +SS+FCIIEGPETVQDFVQMQ +EIQDNI+SRRNKIFLLME
Sbjct: 56  ICASSSDGASASVPSDSDNTSSNFCIIEGPETVQDFVQMQFQEIQDNIRSRRNKIFLLME 115

Query: 371 EVRRLRVQKRIKRTKVIDEIS-EEADEMPDIPSSIPFLPHVXXXXXXXXXXXSFSFISGI 547
           EVRRLR+Q+R+K  K IDE   EEA+EMPDIPSSIPFLPHV           S S I GI
Sbjct: 116 EVRRLRIQQRLKNLKPIDENDIEEANEMPDIPSSIPFLPHVTPKTLKQQYLTSLSVIWGI 175

Query: 548 IVFGGLLAPVLELKLGIGGTSYDDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIE 727
           IVFGGL+AP LELKLG+GGTSY+DFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIE
Sbjct: 176 IVFGGLIAPTLELKLGLGGTSYEDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIE 235

Query: 728 VNNVEQQEKKRCKYCHGTGYLACARCSASGVCLSIEPISIARGSDRPLRAPTTQRCINCS 907
            NNVEQQEKKRCKYCHGTGYLACARCS+SGVCLS +PIS++  S RPLR P TQRC+NCS
Sbjct: 236 ANNVEQQEKKRCKYCHGTGYLACARCSSSGVCLSADPISLSASSSRPLRMPKTQRCLNCS 295

Query: 908 GAGKVMCPTCLCTGMVMASEHDLRIDPFD 994
           GAGKVMCPTCLCTGM+MASEHD R DPFD
Sbjct: 296 GAGKVMCPTCLCTGMLMASEHDPRFDPFD 324


>ref|XP_002308463.1| predicted protein [Populus trichocarpa] gi|222854439|gb|EEE91986.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  415 bits (1066), Expect = e-113
 Identities = 204/248 (82%), Positives = 221/248 (89%), Gaps = 1/248 (0%)
 Frame = +2

Query: 254 SSFCIIEGPETVQDFVQMQAKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVIDEIS 433
           S+FCIIEGPETVQDFVQMQ +EIQDNI+SRRNKIFLLMEEVRRLRVQ+RIK  KV+DE  
Sbjct: 1   SNFCIIEGPETVQDFVQMQMQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIKNLKVVDESG 60

Query: 434 EE-ADEMPDIPSSIPFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTS 610
           EE ADEMPD+PSSIPFLPHV           SFSFISGII+FGGL+AP LELKLG+GGTS
Sbjct: 61  EEDADEMPDMPSSIPFLPHVTPKTLRQLYLTSFSFISGIILFGGLIAPTLELKLGLGGTS 120

Query: 611 YDDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYL 790
           Y+DFIR+MHLP+QLS VDPIVASF GGAVGVIS+LMLIEVNNVEQQEKKRCKYCHGTGYL
Sbjct: 121 YEDFIRSMHLPLQLSMVDPIVASFVGGAVGVISSLMLIEVNNVEQQEKKRCKYCHGTGYL 180

Query: 791 ACARCSASGVCLSIEPISIARGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEH 970
           ACARCSASGVCLSI+PIS++  SDRPL+ P TQRC NCSGAGKVMCPTCLCTGMVMASEH
Sbjct: 181 ACARCSASGVCLSIDPISLSSASDRPLQVPATQRCPNCSGAGKVMCPTCLCTGMVMASEH 240

Query: 971 DLRIDPFD 994
           D R DPFD
Sbjct: 241 DPRFDPFD 248


>ref|NP_001242702.1| uncharacterized protein LOC100794571 [Glycine max]
           gi|255640133|gb|ACU20357.1| unknown [Glycine max]
          Length = 312

 Score =  412 bits (1059), Expect = e-113
 Identities = 214/307 (69%), Positives = 242/307 (78%), Gaps = 12/307 (3%)
 Frame = +2

Query: 110 FISNNNN---HPFYGKPNLVSFSASNSHSRI-------VCCSAAENSSDDIPSGDKSSSS 259
           F+S+ N+    PF G  N   F+ S + + +       VC S    SS D  S D + S+
Sbjct: 10  FLSSKNSIFHAPFKGNNNTKQFTFSKAANLLPLQPRLNVCFS----SSKDAGSSDNTPSN 65

Query: 260 FCIIEGPETVQDFVQMQAKEIQDNIKSRRNKIFLLMEEVRRLRVQKRIKRTKVI--DEIS 433
           FCIIEGPETV+DF+QMQ +EIQDNIKSRRNKIFLLMEEVRRLRVQ+R +R K +  +E  
Sbjct: 66  FCIIEGPETVEDFMQMQLQEIQDNIKSRRNKIFLLMEEVRRLRVQQRTRRGKKVVNEEGE 125

Query: 434 EEADEMPDIPSSIPFLPHVXXXXXXXXXXXSFSFISGIIVFGGLLAPVLELKLGIGGTSY 613
           EE +EMPDIPSSIPF PHV           S SFIS IIVFGGL+AP LELKLG+GGTSY
Sbjct: 126 EEPNEMPDIPSSIPFHPHVTPKTLKKLYLTSISFISAIIVFGGLIAPTLELKLGLGGTSY 185

Query: 614 DDFIRNMHLPMQLSQVDPIVASFSGGAVGVISALMLIEVNNVEQQEKKRCKYCHGTGYLA 793
           +DFIR++HLP+QLSQVDPIVASFSGGAVGVIS LMLIE NNVEQQEKKRCKYCHGTGYLA
Sbjct: 186 EDFIRSLHLPLQLSQVDPIVASFSGGAVGVISVLMLIEANNVEQQEKKRCKYCHGTGYLA 245

Query: 794 CARCSASGVCLSIEPISIARGSDRPLRAPTTQRCINCSGAGKVMCPTCLCTGMVMASEHD 973
           CARCSASGVCL+I+PIS++  S RPL APTT RC NCSGAGKVMCPTCLCTGM+MASEHD
Sbjct: 246 CARCSASGVCLNIDPISVSTASARPLHAPTTTRCPNCSGAGKVMCPTCLCTGMMMASEHD 305

Query: 974 LRIDPFD 994
           LRIDPFD
Sbjct: 306 LRIDPFD 312


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