BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001679
         (2130 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...   592   e-166
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...   519   e-144
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...   511   e-142
emb|CBI19224.3| unnamed protein product [Vitis vinifera]              493   e-137
ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containi...   488   e-135

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Vitis vinifera]
          Length = 475

 Score =  592 bits (1527), Expect = e-166
 Identities = 283/410 (69%), Positives = 350/410 (85%)
 Frame = +1

Query: 280  MQIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSY 459
            ++I++WM +QN F+MS ADHAI LELIIK++SLAEAEEYFE++P+SSS+KAAC+PLL +Y
Sbjct: 63   LEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAY 122

Query: 460  VKERATGKAEALMLKMQALGYTVNPHPFNEMMKLYVATGQFEKVLYVIQQMKHNRIPRNV 639
            VKERA  KAEALMLK+  LG TV+PHPFNEMMKLY+AT QFE+V  VI QMK N+IP NV
Sbjct: 123  VKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNV 182

Query: 640  LSYNIWMNSCSQLSGVAAVEAVYREMLNDESVKVGWSTHSTLANIYINSGLVEKATAALK 819
            LSYN+WM++CS++SG+A+ E VY++M++D++V+VGWST STLANIY+ SGL++KA  ALK
Sbjct: 183  LSYNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALK 242

Query: 820  TAEQMLSMHKRLGYFFLITLYTSLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIG 999
             AE+ LS H RLGYFFLIT+Y SL NK+ +LRLWEASK V GR+TS NYM ILLCLVK+G
Sbjct: 243  NAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLG 302

Query: 1000 DIAEAEKVFRPWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWE 1179
            DIAEAE++FR WES+C KYDIRVSN+LLGAY+R+G +DKAESLHLHTLE+GGCPNYKTWE
Sbjct: 303  DIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWE 362

Query: 1180 ILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAHKYVMV 1359
            ILMEGW+K++ MDKAI+AMKKGFSMLKHCDWRP+   V AIA Y EE G   + ++YV V
Sbjct: 363  ILMEGWMKSQNMDKAINAMKKGFSMLKHCDWRPNHGLVTAIARYLEEHGNVNDLNQYVKV 422

Query: 1360 LRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEMDEEVCVLVKS 1509
            + +LG+A LPLYKSLLR+ +  Q+P  DILKMMEKD IEMD+E   LV++
Sbjct: 423  IHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQA 472


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
            predicted protein [Populus trichocarpa]
          Length = 511

 Score =  519 bits (1336), Expect = e-144
 Identities = 247/410 (60%), Positives = 322/410 (78%), Gaps = 2/410 (0%)
 Frame = +1

Query: 280  MQIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSY 459
            ++I+ WM +QN+FR++   HA+++ELI+KV  L +A EYFE IP S S+KAA +PLL  Y
Sbjct: 98   LEILQWMENQNNFRITPGHHALMMELIVKVNGLNKAGEYFERIPGSGSKKAASLPLLHGY 157

Query: 460  VKERATGKAEALMLKMQALGYTVNPHPFNEMMKLYVATGQFEKVLYVIQQMKHNRIPRNV 639
            VKER   KAE+ M+K+ + G  V PHP+NEMMKLY+A  Q+EKV  VI +MK N++ RNV
Sbjct: 158  VKERDISKAESFMIKLSSSGLLVTPHPYNEMMKLYMALSQYEKVPLVIAEMKRNKLCRNV 217

Query: 640  LSYNIWMNSCSQLSGVAAVEAVYREMLNDESVKVGWSTHSTLANIYINSGLVEKATAALK 819
            LSYN+WM +  ++  VA  E VY+EM++DE+V VGWST ++LAN+YI +G V+KA   LK
Sbjct: 218  LSYNLWMGAFGEVFEVAKAEMVYKEMVSDENVGVGWSTLASLANVYIKAGFVDKALLVLK 277

Query: 820  TAEQMLSMHKRLGYFFLITLYTSLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIG 999
             AE  LS + RLGYFFLITLY+SL NK+G+LRLWEASKAV GR+  A+YM ++ CLVK+G
Sbjct: 278  DAEMKLSTNGRLGYFFLITLYSSLKNKEGVLRLWEASKAVGGRIPCADYMCVISCLVKVG 337

Query: 1000 DIAEAEKVFRPWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWE 1179
            D+  AE+VF  WE+ C KYDIRVSN+LLGAYVR+G + KAES HLHT+E+GGCPNYKTWE
Sbjct: 338  DLVAAEQVFAEWETNCFKYDIRVSNVLLGAYVRNGLMGKAESFHLHTVERGGCPNYKTWE 397

Query: 1180 ILMEGWVKNKEMDKAISAMKKGFSMLK--HCDWRPSSTTVMAIAEYFEECGRYEEAHKYV 1353
            ILMEGWVK+++MDKAI AMKKGFS+LK   CDWRPS + +MAIAE+FE+ G +E+A+ Y+
Sbjct: 398  ILMEGWVKSQKMDKAIDAMKKGFSVLKVERCDWRPSHSILMAIAEHFEKHGNFEDANHYI 457

Query: 1354 MVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEMDEEVCVLV 1503
              +  LG+A+LPLYK  LR+++  Q+PA DILKMMEKD IE+D+E   LV
Sbjct: 458  KAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score =  511 bits (1316), Expect = e-142
 Identities = 251/413 (60%), Positives = 320/413 (77%), Gaps = 1/413 (0%)
 Frame = +1

Query: 280  MQIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIP-DSSSQKAACIPLLQS 456
            ++I +WM +Q +FRMS +D+A+ LELIIKV  + EAEEYF  IP DS ++KAA   LL  
Sbjct: 81   LEIFTWMETQKNFRMSVSDYALRLELIIKVNGIEEAEEYFNFIPHDSVTRKAASFALLHG 140

Query: 457  YVKERATGKAEALMLKMQALGYTVNPHPFNEMMKLYVATGQFEKVLYVIQQMKHNRIPRN 636
            YVK +   KAEALM+K+  LG  VN +PFNEMMKLY+AT Q+EKV  VI QMK N+I  N
Sbjct: 141  YVKVKDVVKAEALMMKLYNLGLIVNCYPFNEMMKLYMATSQYEKVALVIDQMKRNKIALN 200

Query: 637  VLSYNIWMNSCSQLSGVAAVEAVYREMLNDESVKVGWSTHSTLANIYINSGLVEKATAAL 816
            +LSYN+WM+S  ++S V  VE VY+EM+ND++V+VGWST +TLANIY  +G+V+KA  AL
Sbjct: 201  LLSYNLWMSSYGEVSKVVKVELVYKEMVNDDNVEVGWSTLATLANIYTKAGIVDKALLAL 260

Query: 817  KTAEQMLSMHKRLGYFFLITLYTSLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKI 996
            K AE++LS    LGYFFL+T Y+SL NK+G+ RLWEA K V GR+T ANYM +L CLVK+
Sbjct: 261  KNAEKILSTSHLLGYFFLMTQYSSLKNKEGVQRLWEACKGVNGRITCANYMCVLSCLVKV 320

Query: 997  GDIAEAEKVFRPWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTW 1176
            GD+ EAEKVFR WE  CRKYDIRVSN+LLGAYVR G ++KAESLHLHTL++GGCPNYKT 
Sbjct: 321  GDLLEAEKVFRDWELNCRKYDIRVSNVLLGAYVRKGLMNKAESLHLHTLDRGGCPNYKTL 380

Query: 1177 EILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAHKYVM 1356
            EILMEGWVK+++MDKAI AM +  SML+HC WRPS   +M+IAE+ E    +E+A+ ++ 
Sbjct: 381  EILMEGWVKSQKMDKAIDAMTQAISMLEHCHWRPSHGIIMSIAEHLERNRNFEDANHFIQ 440

Query: 1357 VLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEMDEEVCVLVKSLN 1515
            V+  LG+ASLPLYK LLR+ +  Q+ A DILKMMEKD IE+D+E   LV++ N
Sbjct: 441  VIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQAFN 493


>emb|CBI19224.3| unnamed protein product [Vitis vinifera]
          Length = 560

 Score =  493 bits (1269), Expect = e-137
 Identities = 233/326 (71%), Positives = 289/326 (88%)
 Frame = +1

Query: 280  MQIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSY 459
            ++I++WM +QN F+MS ADHAI LELIIK++SLAEAEEYFE++P+SSS+KAAC+PLL +Y
Sbjct: 90   LEILAWMEAQNRFQMSAADHAIRLELIIKIQSLAEAEEYFEHLPNSSSRKAACLPLLHAY 149

Query: 460  VKERATGKAEALMLKMQALGYTVNPHPFNEMMKLYVATGQFEKVLYVIQQMKHNRIPRNV 639
            VKERA  KAEALMLK+  LG TV+PHPFNEMMKLY+AT QFE+V  VI QMK N+IP NV
Sbjct: 150  VKERAIEKAEALMLKLNDLGLTVSPHPFNEMMKLYMATSQFERVPTVILQMKQNKIPLNV 209

Query: 640  LSYNIWMNSCSQLSGVAAVEAVYREMLNDESVKVGWSTHSTLANIYINSGLVEKATAALK 819
            LSYN+WM++CS++SG+A+ E VY++M++D++V+VGWST STLANIY+ SGL++KA  ALK
Sbjct: 210  LSYNLWMSACSEVSGLASAEMVYKDMVDDKNVEVGWSTLSTLANIYLKSGLIKKANLALK 269

Query: 820  TAEQMLSMHKRLGYFFLITLYTSLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVKIG 999
             AE+ LS H RLGYFFLIT+Y SL NK+ +LRLWEASK V GR+TS NYM ILLCLVK+G
Sbjct: 270  NAEKKLSAHNRLGYFFLITMYASLSNKEEVLRLWEASKKVGGRITSTNYMCILLCLVKLG 329

Query: 1000 DIAEAEKVFRPWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKTWE 1179
            DIAEAE++FR WES+C KYDIRVSN+LLGAY+R+G +DKAESLHLHTLE+GGCPNYKTWE
Sbjct: 330  DIAEAERIFREWESKCWKYDIRVSNVLLGAYMRTGSMDKAESLHLHTLERGGCPNYKTWE 389

Query: 1180 ILMEGWVKNKEMDKAISAMKKGFSML 1257
            ILMEGW+K++ MDKAI+AMKKGFS++
Sbjct: 390  ILMEGWMKSQNMDKAINAMKKGFSII 415


>ref|XP_003527890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like
            [Glycine max]
          Length = 496

 Score =  488 bits (1255), Expect = e-135
 Identities = 238/415 (57%), Positives = 313/415 (75%), Gaps = 2/415 (0%)
 Frame = +1

Query: 280  MQIMSWMNSQNSFRMSTADHAILLELIIKVRSLAEAEEYFENIPDSSSQKAACIPLLQSY 459
            +++  W+ +Q +F M  ADHA+ LELII+   L EAEEYF N+PDS+++KAAC+ LL+ Y
Sbjct: 82   LEVFEWIKNQKNFHMIPADHAMKLELIIENHGLMEAEEYFMNLPDSAAKKAACLILLRGY 141

Query: 460  VKERATGKAEALMLKMQALGYTVNPHPFNEMMKLYVATGQFEKVLYVIQQMKHNRIPRNV 639
            V++R T KAE  MLK+  LG  V+PHPFNEMMKLY+ T ++ KV  VIQQMK N+IP NV
Sbjct: 142  VRDRDTSKAETFMLKLYELGLVVSPHPFNEMMKLYLVTCEYRKVPLVIQQMKRNKIPCNV 201

Query: 640  LSYNIWMNSCSQLSG--VAAVEAVYREMLNDESVKVGWSTHSTLANIYINSGLVEKATAA 813
            LSYN+WMN+CS+  G  VAAVE V+R+MLND +V+VGW + +TLAN Y  +G  +KA   
Sbjct: 202  LSYNLWMNACSEEEGYVVAAVETVFRQMLNDRNVEVGWGSLATLANAYKKAGQSKKAILV 261

Query: 814  LKTAEQMLSMHKRLGYFFLITLYTSLGNKDGILRLWEASKAVTGRMTSANYMSILLCLVK 993
            LK AE+ LS   RLG+FFLITLY SL +K+G+LRLWEASKAV GR++ ANY+ IL CLVK
Sbjct: 262  LKDAEKKLSTCNRLGHFFLITLYASLKDKEGVLRLWEASKAVRGRISCANYICILTCLVK 321

Query: 994  IGDIAEAEKVFRPWESECRKYDIRVSNILLGAYVRSGWIDKAESLHLHTLEKGGCPNYKT 1173
            +GDI +A+++F  WES C+KYDIRVSN+LLGAYVR+G +++AESLHLHTL+KGGCPNYKT
Sbjct: 322  LGDIVQAKRIFLEWESNCQKYDIRVSNVLLGAYVRNGLMEEAESLHLHTLQKGGCPNYKT 381

Query: 1174 WEILMEGWVKNKEMDKAISAMKKGFSMLKHCDWRPSSTTVMAIAEYFEECGRYEEAHKYV 1353
             EILMEG+V  ++MD+AI  MK+  +M+K C WRP    V+AIAEY E+ G  E A KY+
Sbjct: 382  LEILMEGYVNWQKMDEAIITMKRALAMMKDCHWRPPHGIVLAIAEYLEKDGNLEYADKYI 441

Query: 1354 MVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEMDEEVCVLVKSLNQ 1518
              +  LG+ SL LYK LLR+ +   KP   ILKMM++D +E+D E   ++K+  +
Sbjct: 442  TDIHNLGLVSLSLYKVLLRMHLSANKPPFHILKMMDEDKVEIDNETLSILKAFTE 496