BLASTX nr result

ID: Coptis21_contig00001662 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001662
         (1432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]   286   1e-74
ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetyl...   283   8e-74
ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transfera...   275   2e-71
ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit ...   275   2e-71
ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|2...   268   3e-69

>emb|CAN71397.1| hypothetical protein VITISV_015184 [Vitis vinifera]
          Length = 169

 Score =  286 bits (731), Expect = 1e-74
 Identities = 143/168 (85%), Positives = 153/168 (91%)
 Frame = -2

Query: 1002 MKTVFVTVGTTSFDTLVKAVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSSGEDGCLAV 823
            ++TVFVTVGTT FD LVKAVDT + K ELF +GYTHLLIQMGRGS+IPTKS+GEDG L V
Sbjct: 2    VRTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVV 61

Query: 822  DYFTFSSSIADNLKSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAA 643
            D+FTFSSSIADNL+SASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELA 
Sbjct: 62   DFFTFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAE 121

Query: 642  RKHLFCARPQTLYNTIANMDLEDLLPYPPADAKPVAKLINRFLGFPND 499
            RKHLFCARPQTLY TIA M+LE LLPY P DA PVAKLINRFLGFP+D
Sbjct: 122  RKHLFCARPQTLYQTIATMNLESLLPYHPGDAAPVAKLINRFLGFPDD 169


>ref|XP_003633637.1| PREDICTED: LOW QUALITY PROTEIN: UDP-N-acetylglucosamine transferase
            subunit ALG13 homolog [Vitis vinifera]
          Length = 178

 Score =  283 bits (724), Expect = 8e-74
 Identities = 142/168 (84%), Positives = 152/168 (90%)
 Frame = -2

Query: 1002 MKTVFVTVGTTSFDTLVKAVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSSGEDGCLAV 823
            ++TVFVTVGTT FD LVKAVDT + K ELF +GYTHLLIQMGRGS+IPTKS+GEDG L V
Sbjct: 11   VRTVFVTVGTTCFDALVKAVDTHEFKRELFARGYTHLLIQMGRGSYIPTKSTGEDGSLVV 70

Query: 822  DYFTFSSSIADNLKSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAA 643
            D+FTFSSSIADNL+SASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELA 
Sbjct: 71   DFFTFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAE 130

Query: 642  RKHLFCARPQTLYNTIANMDLEDLLPYPPADAKPVAKLINRFLGFPND 499
            RKHLFCARPQTLY TIA M+LE LLPY P DA  VAKLINRFLGFP+D
Sbjct: 131  RKHLFCARPQTLYQTIATMNLESLLPYTPGDAAAVAKLINRFLGFPDD 178


>ref|XP_002265906.2| PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG13
           homolog [Vitis vinifera] gi|296080958|emb|CBI18624.3|
           unnamed protein product [Vitis vinifera]
          Length = 178

 Score =  275 bits (704), Expect = 2e-71
 Identities = 137/167 (82%), Positives = 150/167 (89%)
 Frame = -2

Query: 999 KTVFVTVGTTSFDTLVKAVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSSGEDGCLAVD 820
           +TVFVTVGTT FD LVKAVDT++ K+EL  +GYTHLLIQMGRGS+ P KS+GEDG L VD
Sbjct: 12  RTVFVTVGTTCFDALVKAVDTQEFKKELSARGYTHLLIQMGRGSYFPKKSTGEDGSLVVD 71

Query: 819 YFTFSSSIADNLKSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAAR 640
           YF FSSSIADNL+SASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELA R
Sbjct: 72  YFIFSSSIADNLRSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAER 131

Query: 639 KHLFCARPQTLYNTIANMDLEDLLPYPPADAKPVAKLINRFLGFPND 499
           KHLFCA PQTL+ T+A+M+LE LLPY P DA PVAKLINRFLGFP+D
Sbjct: 132 KHLFCAHPQTLFQTVASMNLESLLPYHPGDAAPVAKLINRFLGFPDD 178


>ref|XP_002512346.1| UDP-N-acetylglucosamine transferase subunit alg13, putative
           [Ricinus communis] gi|223548307|gb|EEF49798.1|
           UDP-N-acetylglucosamine transferase subunit alg13,
           putative [Ricinus communis]
          Length = 178

 Score =  275 bits (704), Expect = 2e-71
 Identities = 137/167 (82%), Positives = 153/167 (91%)
 Frame = -2

Query: 999 KTVFVTVGTTSFDTLVKAVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSSGEDGCLAVD 820
           + VFVTVGTT FD LV+AVDT+QVK++LFRKGYTHLLIQMGRGS+ PTK+ GEDG LAVD
Sbjct: 12  RMVFVTVGTTLFDALVRAVDTEQVKQQLFRKGYTHLLIQMGRGSYTPTKTEGEDGSLAVD 71

Query: 819 YFTFSSSIADNLKSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAAR 640
           YFTFSSSIAD+L+SASLVISHAGSGSIFETLRL+KPLIVVVNEDLMDNHQSELAEELA R
Sbjct: 72  YFTFSSSIADHLRSASLVISHAGSGSIFETLRLQKPLIVVVNEDLMDNHQSELAEELAER 131

Query: 639 KHLFCARPQTLYNTIANMDLEDLLPYPPADAKPVAKLINRFLGFPND 499
           K+L+CARPQTL++ IA+MDLE LLPY   DA PV KLINRFLGFP+D
Sbjct: 132 KYLYCARPQTLHHIIADMDLESLLPYSAGDATPVVKLINRFLGFPDD 178


>ref|XP_002328554.1| predicted protein [Populus trichocarpa] gi|222838269|gb|EEE76634.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  268 bits (685), Expect = 3e-69
 Identities = 132/167 (79%), Positives = 148/167 (88%)
 Frame = -2

Query: 999 KTVFVTVGTTSFDTLVKAVDTKQVKEELFRKGYTHLLIQMGRGSFIPTKSSGEDGCLAVD 820
           K VFVTVGTT FD LV+ VDTK+VK+EL R GYTHL+IQMGRGS+ P KS G+DG LAVD
Sbjct: 13  KVVFVTVGTTLFDALVRTVDTKEVKQELLRNGYTHLIIQMGRGSYTPAKSEGKDGSLAVD 72

Query: 819 YFTFSSSIADNLKSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAAR 640
           YFTFS SIAD+L+SASLVISHAGSGSIFETL+L KPLIVVVNEDLMDNHQSELAEELA R
Sbjct: 73  YFTFSPSIADHLRSASLVISHAGSGSIFETLQLGKPLIVVVNEDLMDNHQSELAEELAER 132

Query: 639 KHLFCARPQTLYNTIANMDLEDLLPYPPADAKPVAKLINRFLGFPND 499
           KHL+CA PQTL+ TI++M++E LLPYPP DA  VAKLINRFLGFP+D
Sbjct: 133 KHLYCAHPQTLHQTISDMNIESLLPYPPGDAAAVAKLINRFLGFPDD 179


Top