BLASTX nr result

ID: Coptis21_contig00001653 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001653
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36896.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...    67   2e-09
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...    57   2e-06
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...    57   2e-06

>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +1

Query: 1    DNPHELQLEILDWFQERLRDRFEELWKQMHCEVLLDPQELYPK 129
            +NP EL  EILDWFQE    +FE LW QMH EVLLDPQE +PK
Sbjct: 1048 ENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQERFPK 1090


>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/43 (67%), Positives = 32/43 (74%)
 Frame = +1

Query: 1    DNPHELQLEILDWFQERLRDRFEELWKQMHCEVLLDPQELYPK 129
            +NP EL  EILDWFQE    +FE LW QMH EVLLDPQE +PK
Sbjct: 1364 ENPRELHSEILDWFQETFHKQFEVLWSQMHLEVLLDPQERFPK 1406


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 1    DNPHELQLEILDWFQERLRDRFEELWKQMHCEVLLDPQELYPK 129
            DNP+EL LEILDWFQ+     FE+LW QM CEV L  + L  K
Sbjct: 1280 DNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKK 1322


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 29/43 (67%)
 Frame = +1

Query: 1    DNPHELQLEILDWFQERLRDRFEELWKQMHCEVLLDPQELYPK 129
            DNP+EL LEILDWFQ+     FE+LW QM CEV L  + L  K
Sbjct: 1280 DNPYELHLEILDWFQKSYHSHFEDLWSQMLCEVQLPQKRLIKK 1322


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