BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001649
         (1656 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139466.1| PREDICTED: splicing factor U2af small subuni...   322   2e-85
ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   318   3e-84
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  311   3e-82
ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni...   303   9e-80
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   302   2e-79

>ref|XP_004139466.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus] gi|449510609|ref|XP_004163713.1| PREDICTED:
            splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 326

 Score =  322 bits (824), Expect = 2e-85
 Identities = 176/326 (53%), Positives = 195/326 (59%), Gaps = 26/326 (7%)
 Frame = -3

Query: 1627 MAEHLARIFGTEEDRVNCPFYLKIGACRHGDRCSRLHPKPNSSPTLVLMNMYQRPDMIHP 1448
            MAEHLA IFGTE+DRVNCPFY KIGACRHGDRCSRLH KP+ SPTL+L NMYQRPDMI P
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 1447 GIDSQGLPIPPHVIQSHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNAYIQFREAE 1268
            G+D+QG PI P  IQ H           L+KYGEIESLN+CDNLADHMVGN Y+QFRE E
Sbjct: 61   GVDAQGNPIDPRNIQDHFEEFYEDLFQELNKYGEIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 1267 SAGKALQGLSGRFYAGRPIIADFSPVSDFREATCRQYEENSCNRGGYCNFMHLKKI---- 1100
             A  AL+ LSGRFYAGRPII DFSPV+DFREATCRQYEEN CNRGGYCNFMHLK+I    
Sbjct: 121  QAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRIGREL 180

Query: 1099 XXXXXXXXXXXXXXXXXXXXXXXXXXSYEELSHGSRSH--------------GXXXXXXX 962
                                      SYEE S+G   H                      
Sbjct: 181  RHELFAMYRRRHSHSRSRSRSPYRHRSYEERSYGKHGHSRRYDERDAYHESRSRRHRTTS 240

Query: 961  XXXXXXXXXXRGEQSSIPGREGSAERRAKIELWNREREQAEAADDNNSRNANTNETSYRS 782
                      RG ++  P REGS ERRAKIE WN+EREQ    + N+  N N +E SY S
Sbjct: 241  PGHRSRSRSPRGRKNRSPVREGSEERRAKIEQWNKEREQGNDNNANSDDNRNNHEKSYDS 300

Query: 781  RDR--------GEYHD*QPPAQQGGY 728
              +         E    QPP Q  GY
Sbjct: 301  EVKYANQTCGYEEQQQRQPPEQGYGY 326


>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera]
          Length = 343

 Score =  318 bits (815), Expect = 3e-84
 Identities = 180/343 (52%), Positives = 197/343 (57%), Gaps = 41/343 (11%)
 Frame = -3

Query: 1627 MAEHLARIFGTEEDRVNCPFYLKIGACRHGDRCSRLHPKPNSSPTLVLMNMYQRPDMIHP 1448
            MAEHLA IFGTE+DRVNCPFY KIGACRHGDRCSRLH KP+ SPTL+L NMYQRPDM+ P
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 1447 GIDSQGLPIPPHVIQSHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNAYIQFREAE 1268
            G+D QG P+ P  IQ H           LSKYGEIESLNICDNLADHMVGN Y+QFRE E
Sbjct: 61   GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1267 SAGKALQGLSGRFYAGRPIIADFSPVSDFREATCRQYEENSCNRGGYCNFMHLKKI--XX 1094
             A  AL+ L+GRFYAGRPII DFSPV+DFREATCRQYEEN CNRGGYCNFMHLKKI    
Sbjct: 121  HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180

Query: 1093 XXXXXXXXXXXXXXXXXXXXXXXXSYEELSHG------------------------SRSH 986
                                     +EE  HG                         R H
Sbjct: 181  RRQLFGRNRRRRSRSRSRSPYRHRGHEEHPHGPHGPHGPHGPHGPRGPRGSNRRDDDRDH 240

Query: 985  GXXXXXXXXXXXXXXXXXRGEQSSIPGR-------EGSAERRAKIELWNREREQAEAADD 827
                               G   S  GR       EGSAERRAKIE WNREREQAEA + 
Sbjct: 241  RYHDRGGRRPRSRSPARRGGRSRSPGGRRNKSPVREGSAERRAKIEQWNREREQAEATNK 300

Query: 826  N-NSRNANTNETSYRSRDRGEYH-------D*QPPAQQGGYCY 722
            N NS + N N  +   +D  +Y+       D Q   Q GGY Y
Sbjct: 301  NDNSHSDNGNNNNDFEQDDQQYYNPQHQEEDQQQQQQHGGYNY 343


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  311 bits (797), Expect = 3e-82
 Identities = 166/309 (53%), Positives = 188/309 (60%), Gaps = 19/309 (6%)
 Frame = -3

Query: 1627 MAEHLARIFGTEEDRVNCPFYLKIGACRHGDRCSRLHPKPNSSPTLVLMNMYQRPDMIHP 1448
            MAEHLA IFGTE+DRVNCPFY KIGACRHGDRCSRLH KP+ SPTL+L NMYQRPDMI P
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 1447 GIDSQGLPIPPHVIQSHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNAYIQFREAE 1268
            G+D QG P+ P  IQ H           LSKYGEIESLNICDNLADHMVGN Y+QFRE E
Sbjct: 61   GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1267 SAGKALQGLSGRFYAGRPIIADFSPVSDFREATCRQYEENSCNRGGYCNFMHLKKIXXXX 1088
             AG+AL+ LSGRFYAGRPII DFSPV+DFREATCRQYEEN CNRGGYCNFMHLKKI    
Sbjct: 121  HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKI---S 177

Query: 1087 XXXXXXXXXXXXXXXXXXXXXXSYEELSHGSRSHGXXXXXXXXXXXXXXXXXRGE--QSS 914
                                        HG R HG                 +G   +S 
Sbjct: 178  RELRRQLFGRYRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDDRNQRYHDKGRRPRSR 237

Query: 913  IPG-----------------REGSAERRAKIELWNREREQAEAADDNNSRNANTNETSYR 785
             PG                 RE S ERRAKI  WNRE+EQA+  +++ + +   N  +  
Sbjct: 238  SPGHRGRSRSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTGNNDVNHDVTDNHANGF 297

Query: 784  SRDRGEYHD 758
              +  +Y+D
Sbjct: 298  QDNGEDYYD 306


>ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max]
          Length = 315

 Score =  303 bits (776), Expect = 9e-80
 Identities = 163/313 (52%), Positives = 187/313 (59%), Gaps = 17/313 (5%)
 Frame = -3

Query: 1627 MAEHLARIFGTEEDRVNCPFYLKIGACRHGDRCSRLHPKPNSSPTLVLMNMYQRPDMIHP 1448
            MAEHLA IFGTE+DRVNCPFY KIGACRHGDRCSRLH KP+ SPT++L NMYQRPDMI P
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTILLSNMYQRPDMITP 60

Query: 1447 GIDSQGLPIPPHVIQSHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNAYIQFREAE 1268
            G+D+ G PI P  IQ H           LSKYG+IESLN+CDNLADHMVGN Y+QFRE E
Sbjct: 61   GVDAHGHPIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEE 120

Query: 1267 SAGKALQGLSGRFYAGRPIIADFSPVSDFREATCRQYEENSCNRGGYCNFMHLKKI--XX 1094
             A  A++ L+GRFYAGRPII DFSPV+DFREATCRQYEEN+CNRGGYCNFMHLK+I    
Sbjct: 121  HAANAVRNLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISREL 180

Query: 1093 XXXXXXXXXXXXXXXXXXXXXXXXSYEELSHGS-------RSHGXXXXXXXXXXXXXXXX 935
                                    S+EE SH S       R H                 
Sbjct: 181  RRQLFGKSHGRHSRSRSRSPYRHRSHEERSHRSHSRKYDDRDHHHESRSRRHRSTSPRHR 240

Query: 934  XRGEQSSIPG--------REGSAERRAKIELWNREREQAEAADDNNSRNANTNETSYRSR 779
                +S  PG        R+GS ERRA+IE WNRERE  E     N+   N    S    
Sbjct: 241  RGRSRSRSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAEEINNGNASKHHG 300

Query: 778  DRGEYHD*QPPAQ 740
             + +  + Q P +
Sbjct: 301  HQQQEQEPQSPQE 313


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 317

 Score =  302 bits (774), Expect = 2e-79
 Identities = 168/321 (52%), Positives = 189/321 (58%), Gaps = 24/321 (7%)
 Frame = -3

Query: 1627 MAEHLARIFGTEEDRVNCPFYLKIGACRHGDRCSRLHPKPNSSPTLVLMNMYQRPDMIHP 1448
            MAEHLA IFGTE+DRVNCPFY KIGACRHGDRCSRLH KP+ SPTL+L NMYQRPDMI P
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 1447 GIDSQGLPIPPHVIQSHXXXXXXXXXXXLSKYGEIESLNICDNLADHMVGNAYIQFREAE 1268
            G+D QG  + P  +Q H           LSKYG++ESLNICDNLADHMVGN Y+QFRE E
Sbjct: 61   GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 1267 SAGKALQGLSGRFYAGRPIIADFSPVSDFREATCRQYEENSCNRGGYCNFMHLKKI---- 1100
             A  AL  L+GRFYAGRPII DFSPV+DFREATCRQYEEN CNRGGYCNFMHLKKI    
Sbjct: 121  QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1099 XXXXXXXXXXXXXXXXXXXXXXXXXXSYEELSHG---------SRSHG-----------X 980
                                       YEE SHG         SR  G            
Sbjct: 181  RRRLFGRSRRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEKDPRYHDRSRR 240

Query: 979  XXXXXXXXXXXXXXXXRGEQSSIPGREGSAERRAKIELWNREREQAEAADDNNSRNANTN 800
                             G ++  P RE SAERRAKIE WNR+RE+    DDN S + +  
Sbjct: 241  PRSRSPRHRGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREK----DDNGSNHQDVK 296

Query: 799  ETSYRSRDRGEYHD*QPPAQQ 737
            +    S D  +  D   P++Q
Sbjct: 297  DVG-GSNDLVQNEDEFDPSKQ 316