BLASTX nr result

ID: Coptis21_contig00001643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001643
         (1230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263...   230   6e-58
emb|CBI15946.3| unnamed protein product [Vitis vinifera]              230   6e-58
ref|XP_002527824.1| structural constituent of ribosome, putative...   225   2e-56
ref|XP_002528843.1| structural constituent of ribosome, putative...   219   9e-55
ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213...   217   6e-54

>ref|XP_002279055.2| PREDICTED: uncharacterized protein LOC100263805 [Vitis vinifera]
          Length = 273

 Score =  230 bits (586), Expect = 6e-58
 Identities = 130/220 (59%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
 Frame = +3

Query: 123 NNQTTASNSFDSAESLEKMIF---SGNNQENNPFYKKLDDLEKERRRTGFGSNWMGRNSG 293
           N+     NSF+SA+  E  IF   SG+N  ++ FY+KLD LEK       GS   G  SG
Sbjct: 37  NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQKLDRLEKAHDIYRLGSKPNG-GSG 95

Query: 294 GAFSDSLLDDPSTTLSDEMDGKLKRAAKYFDYDNDEVTREDYSFRPDVRFRGGTTYDIKD 473
             F D L D+   TLSD MDGKLK+ A YF+++ DE+ +EDY+FRPDV F+ G TY+ KD
Sbjct: 96  SQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDEIDQEDYAFRPDVAFKPGMTYEPKD 154

Query: 474 LDLTKPATG-NFVGQEFEVTTEEVLRKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQR 650
           LDLTKP    ++   EFEVTTEEVLRKADFRNVRFL++F+TEAGIIIKRS+T ISAKAQR
Sbjct: 155 LDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFLAHFITEAGIIIKRSKTGISAKAQR 214

Query: 651 KVAREIKTARAFGLMPFTTMGEYPFRFDHSKGQADPDGEH 770
           KVAREIKTARAFGLMPFTTMG   F F  +    D D E+
Sbjct: 215 KVAREIKTARAFGLMPFTTMGTKAFVFGKTMEDLDEDFEY 254


>emb|CBI15946.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  230 bits (586), Expect = 6e-58
 Identities = 130/220 (59%), Positives = 155/220 (70%), Gaps = 4/220 (1%)
 Frame = +3

Query: 123 NNQTTASNSFDSAESLEKMIF---SGNNQENNPFYKKLDDLEKERRRTGFGSNWMGRNSG 293
           N+     NSF+SA+  E  IF   SG+N  ++ FY+KLD LEK       GS   G  SG
Sbjct: 86  NDDNQKKNSFESADDFEHRIFAGTSGSNPNSDSFYQKLDRLEKAHDIYRLGSKPNG-GSG 144

Query: 294 GAFSDSLLDDPSTTLSDEMDGKLKRAAKYFDYDNDEVTREDYSFRPDVRFRGGTTYDIKD 473
             F D L D+   TLSD MDGKLK+ A YF+++ DE+ +EDY+FRPDV F+ G TY+ KD
Sbjct: 145 SQFLDGL-DESFNTLSDGMDGKLKKEATYFEFNPDEIDQEDYAFRPDVAFKPGMTYEPKD 203

Query: 474 LDLTKPATG-NFVGQEFEVTTEEVLRKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQR 650
           LDLTKP    ++   EFEVTTEEVLRKADFRNVRFL++F+TEAGIIIKRS+T ISAKAQR
Sbjct: 204 LDLTKPGIRKSYKRPEFEVTTEEVLRKADFRNVRFLAHFITEAGIIIKRSKTGISAKAQR 263

Query: 651 KVAREIKTARAFGLMPFTTMGEYPFRFDHSKGQADPDGEH 770
           KVAREIKTARAFGLMPFTTMG   F F  +    D D E+
Sbjct: 264 KVAREIKTARAFGLMPFTTMGTKAFVFGKTMEDLDEDFEY 303


>ref|XP_002527824.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223532748|gb|EEF34527.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 258

 Score =  225 bits (573), Expect = 2e-56
 Identities = 122/214 (57%), Positives = 153/214 (71%), Gaps = 2/214 (0%)
 Frame = +3

Query: 138 ASNSFDSAESLEKMIFSGNNQENNPFYKKLDDLEKERRRTGFGSN-WMGRNSGGAFSDSL 314
           +SN+ +S +  E+ IF G ++ + PF++KLD +EK R R G   N  +  N  G + +  
Sbjct: 35  SSNTLESNDEFEQRIFGGISENSLPFFQKLDRIEKARDRPGSRMNEGISSNLDGLYEN-- 92

Query: 315 LDDPSTTLSDEMDGKLKRAAKYFDYDNDEVTREDYSFRPDVRFRGGTTYDIKDLDLTKPA 494
                 TLSD MDGKLK+AA+YF++D +E+T+EDY+FRPD+ FR G TYD KDLDL KP 
Sbjct: 93  ------TLSDGMDGKLKKAARYFEFDPEEITKEDYAFRPDMTFRHGMTYDTKDLDLRKPG 146

Query: 495 TGNFVGQ-EFEVTTEEVLRKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRKVAREIK 671
                 + EF+VTTEEVL KADFRNVRFLSNF+TEAGI+ KRS+T+ISAKAQRKVAREIK
Sbjct: 147 VRKPPKRYEFQVTTEEVLEKADFRNVRFLSNFITEAGIMHKRSKTKISAKAQRKVAREIK 206

Query: 672 TARAFGLMPFTTMGEYPFRFDHSKGQADPDGEHD 773
           TARAFGLMPFTTMG   F F  S    D D E++
Sbjct: 207 TARAFGLMPFTTMGTKSFVFGKSMQDLDEDYEYE 240


>ref|XP_002528843.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223531694|gb|EEF33517.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 271

 Score =  219 bits (559), Expect = 9e-55
 Identities = 120/220 (54%), Positives = 153/220 (69%), Gaps = 2/220 (0%)
 Frame = +3

Query: 120 TNNQTTASNSFDSAESLEKMIFSGNNQENNPFYKKLDDLEKERRRTGFGSN-WMGRNSGG 296
           ++ +  +SN+ +S    E+ IF G ++ + PF++KLD +EK R R G   N  +  N  G
Sbjct: 42  SHGKKDSSNTLESNNEFEQRIFGGISENSLPFFQKLDRIEKARNRPGSRMNEGISSNLDG 101

Query: 297 AFSDSLLDDPSTTLSDEMDGKLKRAAKYFDYDNDEVTREDYSFRPDVRFRGGTTYDIKDL 476
            + +        TLSD MDGKLK+AA+YF++D +E+T+EDY+FRPD+ FR G TYD KDL
Sbjct: 102 LYEN--------TLSDGMDGKLKKAARYFEFDPEEITKEDYAFRPDMTFRRGMTYDTKDL 153

Query: 477 DLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVRFLSNFLTEAGIIIKRSQTRISAKAQRK 653
           DL KP       + EF+VTTEEVL KAD RNVRFLSNF+TEAGI+ KRS+T+ISAKAQRK
Sbjct: 154 DLRKPGVRKPPKRYEFQVTTEEVLEKADSRNVRFLSNFITEAGIMHKRSKTKISAKAQRK 213

Query: 654 VAREIKTARAFGLMPFTTMGEYPFRFDHSKGQADPDGEHD 773
           VA EIKTARAFGLMPFTTMG   F F  S    D D E++
Sbjct: 214 VAGEIKTARAFGLMPFTTMGTKSFVFGKSMQDLDEDYEYE 253


>ref|XP_004143160.1| PREDICTED: uncharacterized protein LOC101213524 [Cucumis sativus]
           gi|449496565|ref|XP_004160167.1| PREDICTED:
           uncharacterized LOC101213524 [Cucumis sativus]
          Length = 273

 Score =  217 bits (552), Expect = 6e-54
 Identities = 123/224 (54%), Positives = 153/224 (68%), Gaps = 4/224 (1%)
 Frame = +3

Query: 117 FTNNQTTASNSFDSAESLEKMIFSGNNQE---NNPFYKKLDDLEKERRRTGFGSNWMGRN 287
           F ++     +SF++A+  E+ IF G +     N+ F++K D L K R R   GS   G N
Sbjct: 38  FDDDNKGKFDSFETADDFERRIFGGGSMVDSGNDAFFQKFDRLGKPRER--IGSKLSGGN 95

Query: 288 SGGAFSDSLLDDPSTTLSDEMDGKLKRAAKYFDYDNDEVTREDYSFRPDVRFRGGTTYDI 467
           +  A  D   +D   TLSD MDGKLK+A+ YF +D +E+ ++DY+FR D+ F  G+TY+I
Sbjct: 96  NFHALYDR--EDNFDTLSDGMDGKLKKASTYFKFDPEEIEKDDYTFRADMSFSPGSTYNI 153

Query: 468 KDLDLTKPATGNFVGQ-EFEVTTEEVLRKADFRNVRFLSNFLTEAGIIIKRSQTRISAKA 644
           KDLDLTKP       + EF+VTTEE LRKADFRNVRFL+NF+TEAGII KRS TRISAKA
Sbjct: 154 KDLDLTKPGFRKPPKRVEFQVTTEEALRKADFRNVRFLANFITEAGIINKRSNTRISAKA 213

Query: 645 QRKVAREIKTARAFGLMPFTTMGEYPFRFDHSKGQADPDGEHDV 776
           QRKVAREIKTARAFGLMPFTTMG   F F  S    D D E++V
Sbjct: 214 QRKVAREIKTARAFGLMPFTTMGTKSFNFGKSMENLDTDFEYEV 257


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