BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001620
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACH63231.1| translation initiation factor [Rheum australe]         216   2e-54
ref|XP_002302848.1| predicted protein [Populus trichocarpa] gi|1...   215   4e-54
gb|ABB55392.1| putative translation initiation factor eIF-1A-lik...   214   7e-54
ref|XP_002320498.1| predicted protein [Populus trichocarpa] gi|1...   213   2e-53
ref|XP_002279938.1| PREDICTED: eukaryotic translation initiation...   212   4e-53

>gb|ACH63231.1| translation initiation factor [Rheum australe]
          Length = 144

 Score =  216 bits (551), Expect = 2e-54
 Identities = 104/111 (93%), Positives = 106/111 (95%)
 Frame = -3

Query: 585 DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGNKRLCHIRGKMHKKVWIAAGDIILV 406
           DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCID  KRLCHIRGKMHKKVWIAAGDIILV
Sbjct: 20  DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDNTKRLCHIRGKMHKKVWIAAGDIILV 79

Query: 405 GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGINVIDEEDDGAA 253
           GLRDYQDDKADVILKYMPDEARLLKAYGELP+N RLNEGI  +DEEDDGAA
Sbjct: 80  GLRDYQDDKADVILKYMPDEARLLKAYGELPDNIRLNEGIATLDEEDDGAA 130


>ref|XP_002302848.1| predicted protein [Populus trichocarpa] gi|118485559|gb|ABK94631.1|
           unknown [Populus trichocarpa]
           gi|222844574|gb|EEE82121.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  215 bits (548), Expect = 4e-54
 Identities = 105/111 (94%), Positives = 107/111 (96%), Gaps = 1/111 (0%)
 Frame = -3

Query: 585 DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGNKRLCHIRGKMHKKVWIAAGDIILV 406
           DDEKREL+FKEDGQEYAQVLRMLGNGRCEATCIDG KRLCHIRGKMHKKVWIAAGDIILV
Sbjct: 20  DDEKRELIFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILV 79

Query: 405 GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI-NVIDEEDDGA 256
           GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI   +DEEDDGA
Sbjct: 80  GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDDGA 130


>gb|ABB55392.1| putative translation initiation factor eIF-1A-like [Solanum
           tuberosum]
          Length = 144

 Score =  214 bits (546), Expect = 7e-54
 Identities = 103/111 (92%), Positives = 106/111 (95%)
 Frame = -3

Query: 585 DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGNKRLCHIRGKMHKKVWIAAGDIILV 406
           DDEKRELVFKEDGQEYAQVLRMLGNGRCEA CIDG KRLCHIRGKMHKKVWIAAGDI+LV
Sbjct: 20  DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIVLV 79

Query: 405 GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGINVIDEEDDGAA 253
           GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI  +DEED+ AA
Sbjct: 80  GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIANLDEEDENAA 130


>ref|XP_002320498.1| predicted protein [Populus trichocarpa] gi|118484317|gb|ABK94036.1|
           unknown [Populus trichocarpa]
           gi|222861271|gb|EEE98813.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  213 bits (542), Expect = 2e-53
 Identities = 104/111 (93%), Positives = 106/111 (95%), Gaps = 1/111 (0%)
 Frame = -3

Query: 585 DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGNKRLCHIRGKMHKKVWIAAGDIILV 406
           DDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDG KRLCHIRGKMHKKVWIAAGDIILV
Sbjct: 20  DDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILV 79

Query: 405 GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI-NVIDEEDDGA 256
           GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI   +DEEDDGA
Sbjct: 80  GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDDGA 130


>ref|XP_002279938.1| PREDICTED: eukaryotic translation initiation factor 1A-like [Vitis
           vinifera] gi|225459517|ref|XP_002285844.1| PREDICTED:
           eukaryotic translation initiation factor 1A [Vitis
           vinifera] gi|147807310|emb|CAN73005.1| hypothetical
           protein VITISV_021007 [Vitis vinifera]
           gi|147821636|emb|CAN70425.1| hypothetical protein
           VITISV_033730 [Vitis vinifera]
          Length = 145

 Score =  212 bits (539), Expect = 4e-53
 Identities = 104/111 (93%), Positives = 106/111 (95%), Gaps = 1/111 (0%)
 Frame = -3

Query: 585 DDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGNKRLCHIRGKMHKKVWIAAGDIILV 406
           DDEKRELVFKEDGQEYAQVLRMLGNGRCEA CIDG KRLCHIRGKMHKKVWIAAGDIILV
Sbjct: 20  DDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILV 79

Query: 405 GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI-NVIDEEDDGA 256
           GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGI   +DEED+GA
Sbjct: 80  GLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLNEGIAGGLDEEDEGA 130