BLASTX nr result

ID: Coptis21_contig00001618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001618
         (1019 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520000.1| conserved hypothetical protein [Ricinus comm...   119   9e-25
gb|AET97665.1| hydrogen peroxide induced protein 1 [Camellia sin...   116   8e-24
ref|XP_002328984.1| predicted protein [Populus trichocarpa] gi|2...   110   7e-22
gb|ABK93149.1| unknown [Populus trichocarpa]                          104   4e-20
gb|ABK23362.1| unknown [Picea sitchensis] gi|116785016|gb|ABK235...   101   3e-19

>ref|XP_002520000.1| conserved hypothetical protein [Ricinus communis]
           gi|223540764|gb|EEF42324.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 133

 Score =  119 bits (299), Expect = 9e-25
 Identities = 66/133 (49%), Positives = 86/133 (64%), Gaps = 8/133 (6%)
 Frame = -1

Query: 824 MARNLQMSRGITGVVKRFLKQ----QHPSPIVVTGTTTFSRRGVHDSVYDKNVDDQLHTN 657
           MA N + ++GI  + KR +KQ     + S     G +T +RR  H S YDKN+DDQ+  +
Sbjct: 1   MAANSKSTQGIASLGKRVVKQIWTVNNSSRFAAAGASTAARRATHTSAYDKNLDDQVRPS 60

Query: 656 LVPDEVIQPPQSEEYWAPHPETGVFTPPAEHEQQGRAGGDR--STQYGNGGSDTVLEQQA 483
           +VPDEVIQP  S++YWAPHP+TGVF P    E    AGG+R  ST     G+DTVLE++A
Sbjct: 61  VVPDEVIQP-LSDKYWAPHPQTGVFGPAT--EPNSGAGGERGFSTSPAKAGNDTVLEEKA 117

Query: 482 WFRPN--EDVEKP 450
           WFRP   ED+EKP
Sbjct: 118 WFRPTSIEDLEKP 130


>gb|AET97665.1| hydrogen peroxide induced protein 1 [Camellia sinensis]
          Length = 123

 Score =  116 bits (291), Expect = 8e-24
 Identities = 67/127 (52%), Positives = 85/127 (66%), Gaps = 2/127 (1%)
 Frame = -1

Query: 824 MARNLQMSRGITGVVKRFLKQQHP--SPIVVTGTTTFSRRGVHDSVYDKNVDDQLHTNLV 651
           MA N Q  RG+ G+ KRF+ Q     S       +   RR VH SVYDKN+D+Q+H  +V
Sbjct: 1   MAANSQR-RGLVGIGKRFVNQIRAGSSRDPFQSPSHSLRRAVHGSVYDKNLDEQVHPTVV 59

Query: 650 PDEVIQPPQSEEYWAPHPETGVFTPPAEHEQQGRAGGDRSTQYGNGGSDTVLEQQAWFRP 471
           PD+VI+ PQS++YWAPHP+TGVF P  E   Q RA G  ST   NGG D+VLEQ+A+FRP
Sbjct: 60  PDDVIK-PQSDKYWAPHPQTGVFGPATE---QNRAAGFHSTV--NGGEDSVLEQKAFFRP 113

Query: 470 NEDVEKP 450
            ED++KP
Sbjct: 114 LEDLDKP 120


>ref|XP_002328984.1| predicted protein [Populus trichocarpa] gi|222839218|gb|EEE77569.1|
           predicted protein [Populus trichocarpa]
          Length = 128

 Score =  110 bits (274), Expect = 7e-22
 Identities = 65/129 (50%), Positives = 81/129 (62%), Gaps = 4/129 (3%)
 Frame = -1

Query: 824 MARNLQMSRGITG--VVKRFLKQQHPSPIVVTGTTTFSRRGVHDSVYDKNVDDQLHTNLV 651
           MA N + + GI G  VV +           V+ T + SR G H SVYDKN+DD+L  N+V
Sbjct: 1   MAANFK-NTGILGKRVVNQIWTPNSARSFSVSNTPSLSR-GAHTSVYDKNLDDELRPNVV 58

Query: 650 PDEVIQPPQSEEYWAPHPETGVFTPPAEHEQQGRAGGDRSTQYGNGGSDTVLEQQAWFRP 471
           PD+VI+ PQS++YWAPHP TGVF P  E +      GD S   GNGG D VLE++AWFRP
Sbjct: 59  PDDVIK-PQSDKYWAPHPRTGVFGPATE-QHLSEISGD-SASVGNGGQDPVLEEKAWFRP 115

Query: 470 N--EDVEKP 450
              ED+EKP
Sbjct: 116 TSLEDLEKP 124


>gb|ABK93149.1| unknown [Populus trichocarpa]
          Length = 127

 Score =  104 bits (259), Expect = 4e-20
 Identities = 54/96 (56%), Positives = 67/96 (69%), Gaps = 2/96 (2%)
 Frame = -1

Query: 731 TTTFSRRGVHDSVYDKNVDDQLHTNLVPDEVIQPPQSEEYWAPHPETGVFTPPAEHEQQG 552
           + T S RG H SVYDKN+DD+L  N+VPD+VI+  QS++YWAPHP TGVF P  E +   
Sbjct: 31  SNTPSLRGAHTSVYDKNLDDELQPNVVPDDVIK-TQSDKYWAPHPRTGVFGPATE-QHLS 88

Query: 551 RAGGDRSTQYGNGGSDTVLEQQAWFRPN--EDVEKP 450
              GD S   G+GG D VLE++AWFRP   ED+EKP
Sbjct: 89  EISGD-SASVGDGGQDPVLEEKAWFRPTSLEDLEKP 123


>gb|ABK23362.1| unknown [Picea sitchensis] gi|116785016|gb|ABK23558.1| unknown
           [Picea sitchensis] gi|116790762|gb|ABK25730.1| unknown
           [Picea sitchensis] gi|116791917|gb|ABK26158.1| unknown
           [Picea sitchensis] gi|116791932|gb|ABK26165.1| unknown
           [Picea sitchensis] gi|116793773|gb|ABK26872.1| unknown
           [Picea sitchensis] gi|148907530|gb|ABR16895.1| unknown
           [Picea sitchensis]
          Length = 129

 Score =  101 bits (251), Expect = 3e-19
 Identities = 62/131 (47%), Positives = 81/131 (61%), Gaps = 7/131 (5%)
 Frame = -1

Query: 824 MARNLQMSRGITGVVKRFLKQ-----QHPSPIVVTGTTTF--SRRGVHDSVYDKNVDDQL 666
           MA  LQM RG +G + R L +     + P+   V   T    SR+ +H S+Y+KN DD L
Sbjct: 1   MAAKLQM-RGSSGGIIRGLNKIWGNVRDPTGAYVAANTAIPSSRKCLHSSLYEKNEDDGL 59

Query: 665 HTNLVPDEVIQPPQSEEYWAPHPETGVFTPPAEHEQQGRAGGDRSTQYGNGGSDTVLEQQ 486
           H N VPD+VIQ P+S++ W PHPETGVF P    +Q  R G D S+   +G  ++VLEQQ
Sbjct: 60  HLNRVPDDVIQ-PESQKSWVPHPETGVFGP--AEQQNWRGGEDHSSPEKSG--ESVLEQQ 114

Query: 485 AWFRPNEDVEK 453
            W+RP EDVEK
Sbjct: 115 VWYRPLEDVEK 125


Top