BLASTX nr result

ID: Coptis21_contig00001608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001608
         (1003 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529492.1| PREDICTED: uncharacterized protein LOC100785...   105   2e-20
tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea m...    91   4e-16
ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265...    91   6e-16
emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]    91   6e-16
gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]    89   1e-15

>ref|XP_003529492.1| PREDICTED: uncharacterized protein LOC100785875 [Glycine max]
          Length = 375

 Score =  105 bits (261), Expect = 2e-20
 Identities = 78/283 (27%), Positives = 128/283 (45%), Gaps = 10/283 (3%)
 Frame = +2

Query: 74  WNDQMDQVMLDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSIHARNRLKTWK 253
           W D+MD  + + L  Q+ LGN+ +  +K  AY A +  +     + +T  +  NRLK WK
Sbjct: 93  WTDEMDHCLTELLVNQVMLGNRLEKFFKTSAYIAALTALNERFDLNLTKENIINRLKIWK 152

Query: 254 RIVSGVQELLGLSGFGWDDCKKTVTADESVWADAXXXXXXXXXXXXXXIENYAELLEVVG 433
           +    ++E+L    F WD+  K V A +  W +               IENY EL  +VG
Sbjct: 153 KQYDVLKEMLSQGRFEWDEGCKMVVATDLAWDEYIKKHPYARHLRDRHIENYHELGMIVG 212

Query: 434 NDQANGLRETTTTMADEDQHVNDDTEENVNME---------DADDNAGDEDTMXXXXXXX 586
           ++Q +G    +      D ++  + EE+               D NA DE  +       
Sbjct: 213 DEQGSG--NWSENFERFDVNLTPNYEEHAEAPALVLADVQISPDANASDE--VQGSSEQT 268

Query: 587 XXXXILAQPNDKLKGRRSVIAGVQREMVG-MRKEIGRIAGAMESTNEMNDSLWAPVREAL 763
                 +Q + K   +R   + V  EM+  M  +I RIA A+   N+        V E +
Sbjct: 269 RARPSSSQSHSKQPSKRRRTSDVMLEMMSVMAADISRIADALSENNK--TVCLEEVVEKV 326

Query: 764 KAFADVDEDIKIEAMEWFAQDVEKRRMFLNMDEHQRQRWLVRK 892
           +   D D+D+ IEA E+   D ++  MFL +DE  R++WL+++
Sbjct: 327 QNMPDFDDDLIIEACEYLCFDEKRALMFLKLDERLRKKWLLKR 369


>tpg|DAA39253.1| TPA: hypothetical protein ZEAMMB73_547579 [Zea mays]
          Length = 261

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 1/276 (0%)
 Frame = +2

Query: 62  GHLFWNDQMDQVMLDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSIHARNRL 241
           G++ WND+MD+V+LDT  +  + G++ Q GWK+  YTAVV NV   C + IT  +  +R 
Sbjct: 10  GYVPWNDEMDKVLLDTFVDYYNKGDRCQNGWKSHVYTAVVKNVCEKCNVTITKENISSRS 69

Query: 242 KTWKRIVSGVQELLGLSGFGWDDCKKTVTADESVWADAXXXXXXXXXXXXXXIENYAELL 421
           KT+ +  + +  LL  SGFGWD  K  +  D     D               +  + +LL
Sbjct: 70  KTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYIERNKEAKGYRHKVVKFWDLL 129

Query: 422 EVVGN-DQANGLRETTTTMADEDQHVNDDTEENVNMEDADDNAGDEDTMXXXXXXXXXXX 598
            +V N DQANG    T   + ++    +DT      +DA  +     ++           
Sbjct: 130 SLVYNKDQANGEGAKTAAESSKEMAKENDT----GGKDAPYSVSSSSSLKRQRSDDSFNS 185

Query: 599 ILAQPNDKLKGRRSVIAGVQREMVGMRKEIGRIAGAMESTNEMNDSLWAPVREALKAFAD 778
           I     D L                ++ +  ++  + E            V  AL+    
Sbjct: 186 IWCDKFDMLTS-------------ALKDDGPKLPSSAE------------VLAALQEVEG 220

Query: 779 VDEDIKIEAMEWFAQDVEKRRMFLNMDEHQRQRWLV 886
           +DED ++E  +    +  K    + +   +R+RWL+
Sbjct: 221 LDEDTELELYDILTSNARKFESMMALPMERRKRWLM 256


>ref|XP_002269324.1| PREDICTED: uncharacterized protein LOC100265757 [Vitis vinifera]
          Length = 533

 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 10/296 (3%)
 Frame = +2

Query: 35   ESGPEFQQSGHLFWNDQMDQVMLDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKI 214
            E+GP        +W   MD+  +D + +Q+  GN+  G ++  A+  ++ +       K 
Sbjct: 236  ETGPSMSHRTRTYWQPPMDRYFIDLMLDQVQKGNQVDGVFRKQAWMEMIASFNAKFGFKY 295

Query: 215  TSIHARNRLKTWKRIVSGVQELLGLSGFGWDDCKKTVTADESVWADAXXXXXXXXXXXXX 394
                 +NR KT +R  + ++ LL L+GF WDD ++ VTAD+ VW D              
Sbjct: 296  DMDVLKNRFKTLRRQYNVIRSLLDLNGFIWDDTRQMVTADDCVWQDYIKTHTNARQYMTR 355

Query: 395  XIENYAEL------LEVVGNDQANGLRETTTTMADEDQHVNDDTEENVNMEDADDNAGDE 556
             +  Y +L      L + G D   G  E       + Q V   +E       +++  G+ 
Sbjct: 356  PVPYYQDLCVICRELSIDGRDTDLGYDEPDDIPEVKFQGVLKISESPAASFSSEEQLGEL 415

Query: 557  DTMXXXXXXXXXXXILAQPND----KLKGRRSVIAGVQREMVGMRKEIGRIAGAMESTNE 724
                          +    N     +++ +   +A   REMV     I       E++  
Sbjct: 416  KESSHSGLRRNKRQLENPSNSATPKRIRKKDGNMASALREMVTAVSSISEKNKDDENSGS 475

Query: 725  MNDSLWAPVREALKAFADVDEDIKIEAMEWFAQDVEKRRMFLNMDEHQRQRWLVRK 892
            ++      V EA++A  D+DE++ ++A + F +D +K + FL +D   R++WL+RK
Sbjct: 476  ISIE---SVIEAVQALPDMDEELVLDACD-FLEDEKKAKTFLALDVKLRKKWLIRK 527


>emb|CAN71765.1| hypothetical protein VITISV_026917 [Vitis vinifera]
          Length = 975

 Score = 90.5 bits (223), Expect = 6e-16
 Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 10/296 (3%)
 Frame = +2

Query: 35   ESGPEFQQSGHLFWNDQMDQVMLDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKI 214
            E+GP        +W   MD+  +D + +Q+  GN+  G ++  A+  ++ +       K 
Sbjct: 678  ETGPSMSHRTRTYWQPPMDRYFIDLMLDQVQKGNQVDGVFRKQAWMEMIASFNAKFGFKY 737

Query: 215  TSIHARNRLKTWKRIVSGVQELLGLSGFGWDDCKKTVTADESVWADAXXXXXXXXXXXXX 394
                 +NR KT +R  + ++ LL L+GF WDD ++ VTAD+ VW D              
Sbjct: 738  DMDVLKNRFKTLRRQYNVIRSLLDLNGFIWDDTRQMVTADDCVWQDYIKTHTNARQYMTR 797

Query: 395  XIENYAEL------LEVVGNDQANGLRETTTTMADEDQHVNDDTEENVNMEDADDNAGDE 556
             +  Y +L      L + G D   G  E       + Q V   +E       +++  G+ 
Sbjct: 798  PVPYYQDLCVICRELSIDGRDTDLGYDEPDDIPEVKFQGVLKISESPAASFSSEEQLGEL 857

Query: 557  DTMXXXXXXXXXXXILAQPND----KLKGRRSVIAGVQREMVGMRKEIGRIAGAMESTNE 724
                          +    N     +++ +   +A   REMV     I       E++  
Sbjct: 858  KESSHSGLRRNKRQLENPSNSATPKRIRKKDGNMASALREMVTAVSSISEKNKDDENSGS 917

Query: 725  MNDSLWAPVREALKAFADVDEDIKIEAMEWFAQDVEKRRMFLNMDEHQRQRWLVRK 892
            ++      V EA++A  D+DE++ ++A + F +D +K + FL +D   R++WL+RK
Sbjct: 918  ISIE---SVIEAVQALPDMDEELVLDACD-FLEDEKKAKTFLALDVKLRKKWLIRK 969


>gb|AEJ07903.1| putative PIFa transposase [Zea mays subsp. mexicana]
          Length = 558

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 68/276 (24%), Positives = 115/276 (41%), Gaps = 1/276 (0%)
 Frame = +2

Query: 62   GHLFWNDQMDQVMLDTLREQLSLGNKGQGGWKAVAYTAVVNNVLHICRMKITSIHARNRL 241
            G++ WND+MD+V+LDT  +  + G++ Q GWK+  YTA V NV   C + IT  +  +R 
Sbjct: 307  GYVPWNDEMDKVLLDTFVDYYNKGDRCQNGWKSHVYTAAVKNVCEKCNVTITKENISSRS 366

Query: 242  KTWKRIVSGVQELLGLSGFGWDDCKKTVTADESVWADAXXXXXXXXXXXXXXIENYAELL 421
            KT+ +  + +  LL  SGFGWD  K  +  D     D               +  + +LL
Sbjct: 367  KTFDKHYNIINGLLSTSGFGWDWEKNKLKVDSDTVWDEYVERNKEAKGYRHKVVKFWDLL 426

Query: 422  EVVGN-DQANGLRETTTTMADEDQHVNDDTEENVNMEDADDNAGDEDTMXXXXXXXXXXX 598
             +V N DQANG    T   + ++    +DT      +DA  +     ++           
Sbjct: 427  SLVYNKDQANGEGAKTAAESSKEMAKENDT----GGKDAPYSVSSSSSLKRQRSDDSFNS 482

Query: 599  ILAQPNDKLKGRRSVIAGVQREMVGMRKEIGRIAGAMESTNEMNDSLWAPVREALKAFAD 778
            I     D L                ++ +  ++  + E            V  AL+    
Sbjct: 483  IWCDKFDMLTS-------------ALKDDGPKLPSSAE------------VLAALQEVEG 517

Query: 779  VDEDIKIEAMEWFAQDVEKRRMFLNMDEHQRQRWLV 886
            +DED ++E  +    +  K    + +   +R+RWL+
Sbjct: 518  LDEDTELELYDILTSNARKFESMMALPMERRKRWLM 553


Top