BLASTX nr result

ID: Coptis21_contig00001603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001603
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B...   234   3e-59
emb|CBI34875.3| unnamed protein product [Vitis vinifera]              234   3e-59
ref|XP_002298537.1| predicted protein [Populus trichocarpa] gi|2...   229   6e-58
ref|XP_002324005.1| predicted protein [Populus trichocarpa] gi|2...   224   3e-56
ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus co...   223   5e-56

>ref|XP_002275160.1| PREDICTED: WD repeat-containing protein 82-B-like [Vitis vinifera]
          Length = 339

 Score =  234 bits (596), Expect = 3e-59
 Identities = 112/141 (79%), Positives = 121/141 (85%)
 Frame = +2

Query: 2   VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVITEATFSQD 181
           VGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS EPSP+   EATF+ D
Sbjct: 197 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPSTTIEATFTPD 256

Query: 182 GQYVVSGSGDGNLHAWSINMRNEVACWNSHIGVTTCLKWAPRRVMFVAASTILTFWIPND 361
           GQYVVSGSGDG LHAWSI+MR+EVACWNS+IGVT+CLKWAPRR MFVAAST+LTFWIPN 
Sbjct: 257 GQYVVSGSGDGTLHAWSISMRHEVACWNSNIGVTSCLKWAPRRAMFVAASTVLTFWIPNA 316

Query: 362 SKTNVEAGNVGLAAGI*HGHI 424
           SK+  + GN    AG    HI
Sbjct: 317 SKSTADPGNTDPEAGPQSEHI 337


>emb|CBI34875.3| unnamed protein product [Vitis vinifera]
          Length = 338

 Score =  234 bits (596), Expect = 3e-59
 Identities = 112/141 (79%), Positives = 121/141 (85%)
 Frame = +2

Query: 2   VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVITEATFSQD 181
           VGGDTAEV DIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFS EPSP+   EATF+ D
Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSLEPSPSTTIEATFTPD 255

Query: 182 GQYVVSGSGDGNLHAWSINMRNEVACWNSHIGVTTCLKWAPRRVMFVAASTILTFWIPND 361
           GQYVVSGSGDG LHAWSI+MR+EVACWNS+IGVT+CLKWAPRR MFVAAST+LTFWIPN 
Sbjct: 256 GQYVVSGSGDGTLHAWSISMRHEVACWNSNIGVTSCLKWAPRRAMFVAASTVLTFWIPNA 315

Query: 362 SKTNVEAGNVGLAAGI*HGHI 424
           SK+  + GN    AG    HI
Sbjct: 316 SKSTADPGNTDPEAGPQSEHI 336


>ref|XP_002298537.1| predicted protein [Populus trichocarpa] gi|222845795|gb|EEE83342.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  229 bits (585), Expect = 6e-58
 Identities = 106/126 (84%), Positives = 115/126 (91%)
 Frame = +2

Query: 2   VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVITEATFSQD 181
           VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGGEKRCGFS EPSPN   EATF+ D
Sbjct: 199 VGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGFSLEPSPNTKIEATFTPD 258

Query: 182 GQYVVSGSGDGNLHAWSINMRNEVACWNSHIGVTTCLKWAPRRVMFVAASTILTFWIPND 361
           GQYVVSGSGDG LHAW+INMRNEV+CWNSHIG+ +CLKWAPRR MFVAAST+LTFWIP+ 
Sbjct: 259 GQYVVSGSGDGTLHAWNINMRNEVSCWNSHIGIASCLKWAPRRAMFVAASTVLTFWIPDS 318

Query: 362 SKTNVE 379
           SK+ VE
Sbjct: 319 SKSTVE 324


>ref|XP_002324005.1| predicted protein [Populus trichocarpa] gi|222867007|gb|EEF04138.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  224 bits (570), Expect = 3e-56
 Identities = 102/126 (80%), Positives = 114/126 (90%)
 Frame = +2

Query: 2   VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVITEATFSQD 181
           VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGG+KRCGFS EPSP+   EATF+ D
Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGDKRCGFSLEPSPSTTIEATFTPD 255

Query: 182 GQYVVSGSGDGNLHAWSINMRNEVACWNSHIGVTTCLKWAPRRVMFVAASTILTFWIPND 361
           GQYVVSGSGDG LHAW+INM+NEV+CWNSHIG+ +CLKWAPRR MFVAAST+LTFWIP+ 
Sbjct: 256 GQYVVSGSGDGTLHAWNINMQNEVSCWNSHIGIASCLKWAPRRAMFVAASTVLTFWIPDS 315

Query: 362 SKTNVE 379
           SK  V+
Sbjct: 316 SKPTVD 321


>ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus communis]
           gi|223539356|gb|EEF40947.1| COMPASS component SWD2,
           putative [Ricinus communis]
          Length = 338

 Score =  223 bits (568), Expect = 5e-56
 Identities = 104/123 (84%), Positives = 111/123 (90%)
 Frame = +2

Query: 2   VGGDTAEVSDIKFSNDGKSMLLTTTNNNIYVLDAYGGEKRCGFSSEPSPNVITEATFSQD 181
           VGGDTAEV DIKFSNDGKSMLLTTT+NNIYVLDAYGGEKRCGFS EPSPN   EATF+ D
Sbjct: 196 VGGDTAEVCDIKFSNDGKSMLLTTTSNNIYVLDAYGGEKRCGFSLEPSPNTTIEATFTPD 255

Query: 182 GQYVVSGSGDGNLHAWSINMRNEVACWNSHIGVTTCLKWAPRRVMFVAASTILTFWIPND 361
           GQYVVSGSGDG LHAW+INMRNEVA WNSHIGV +C KWAPRR MFVAAS++LTFWIPN 
Sbjct: 256 GQYVVSGSGDGTLHAWNINMRNEVASWNSHIGVASCFKWAPRRAMFVAASSVLTFWIPNP 315

Query: 362 SKT 370
           SK+
Sbjct: 316 SKS 318


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