BLASTX nr result

ID: Coptis21_contig00001598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001598
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511200.1| elongation factor 1-beta, putative [Ricinus ...   266   6e-69
emb|CBI15651.3| unnamed protein product [Vitis vinifera]              253   4e-65
ref|XP_002283673.1| PREDICTED: elongation factor 1-delta-like [V...   253   4e-65
gb|AFK44172.1| unknown [Medicago truncatula]                          248   2e-63
dbj|BAJ22388.1| elongation factor 1 beta [Vigna unguiculata]          247   3e-63

>ref|XP_002511200.1| elongation factor 1-beta, putative [Ricinus communis]
           gi|223550315|gb|EEF51802.1| elongation factor 1-beta,
           putative [Ricinus communis]
          Length = 232

 Score =  266 bits (680), Expect = 6e-69
 Identities = 143/232 (61%), Positives = 158/232 (68%)
 Frame = -3

Query: 919 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 740
           MA TF+++ SA GLK LDDYLL RSYITGYQASKDDVTVY AIS+ PSSEYVNVSRWF H
Sbjct: 1   MAGTFYDLGSAAGLKNLDDYLLTRSYITGYQASKDDVTVYAAISNAPSSEYVNVSRWFHH 60

Query: 739 IDALLRIXXXXXXXXXXXXXGFAPPIDDKVATPATTDSKAXXXXXXXXXXXDLFXXXXXX 560
           IDALLRI             GFAP  ++ VATP  TDSKA           DLF      
Sbjct: 61  IDALLRISGVSAEGSGVTVKGFAPVAEEAVATPPATDSKAADAEDDDDDDVDLFGEETEE 120

Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMEGLTWGASK 380
                                    VLLD+KPWDDETDMKKLEEAVRS++MEGL WGASK
Sbjct: 121 EKKAAEERAAAVKASAKKKESGKSSVLLDIKPWDDETDMKKLEEAVRSIQMEGLLWGASK 180

Query: 379 LAPVGYGIKKLQIMLTIVDDLVSIDNLIEDRLTSEPANEYIQSCDIAAFNKI 224
           L PVGYGIKKLQIM+T+VDDLVS+DNLIE+ LT EP NE++QSCDI AFNKI
Sbjct: 181 LVPVGYGIKKLQIMMTVVDDLVSVDNLIEEHLTVEPINEHVQSCDIVAFNKI 232


>emb|CBI15651.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  253 bits (647), Expect = 4e-65
 Identities = 138/232 (59%), Positives = 156/232 (67%)
 Frame = -3

Query: 919 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 740
           MA TF+ VNS  GLK+LD+YLL RSYI+GYQASKDD+TV+ A+S  PSSEYVNVSRW+ H
Sbjct: 1   MAVTFYGVNSGSGLKKLDEYLLTRSYISGYQASKDDITVHAALSKAPSSEYVNVSRWYNH 60

Query: 739 IDALLRIXXXXXXXXXXXXXGFAPPIDDKVATPATTDSKAXXXXXXXXXXXDLFXXXXXX 560
           I++LLRI             GFAP   D VATP   D+KA           DLF      
Sbjct: 61  IESLLRISGVSGEGCGVTIEGFAPV--DAVATPPAEDTKATAAEDDDDDDVDLFGEETEE 118

Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMEGLTWGASK 380
                                    VLLDVKPWDDETDMKKLEEAVRS++MEGL WGASK
Sbjct: 119 EKKAAEARAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIKMEGLLWGASK 178

Query: 379 LAPVGYGIKKLQIMLTIVDDLVSIDNLIEDRLTSEPANEYIQSCDIAAFNKI 224
           L PVGYGIKKLQIMLTIVDDLVS+D+LIE++LT EP NEY+QSCDI AFNKI
Sbjct: 179 LVPVGYGIKKLQIMLTIVDDLVSVDDLIEEQLTVEPTNEYVQSCDIVAFNKI 230


>ref|XP_002283673.1| PREDICTED: elongation factor 1-delta-like [Vitis vinifera]
          Length = 230

 Score =  253 bits (647), Expect = 4e-65
 Identities = 138/232 (59%), Positives = 156/232 (67%)
 Frame = -3

Query: 919 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 740
           MA TF+ VNS  GLK+LD+YLL RSYI+GYQASKDD+TV+ A+S  PSSEYVNVSRW+ H
Sbjct: 1   MAVTFYGVNSGSGLKKLDEYLLTRSYISGYQASKDDITVHAALSKAPSSEYVNVSRWYNH 60

Query: 739 IDALLRIXXXXXXXXXXXXXGFAPPIDDKVATPATTDSKAXXXXXXXXXXXDLFXXXXXX 560
           I++LLRI             GFAP   D VATP   D+KA           DLF      
Sbjct: 61  IESLLRISGVSGEGCGVTIEGFAPV--DAVATPPAEDTKATAAEDDDDDDVDLFGEETEE 118

Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMEGLTWGASK 380
                                    VLLDVKPWDDETDMKKLEEAVRS++MEGL WGASK
Sbjct: 119 EKKAAEARAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSIKMEGLLWGASK 178

Query: 379 LAPVGYGIKKLQIMLTIVDDLVSIDNLIEDRLTSEPANEYIQSCDIAAFNKI 224
           L PVGYGIKKLQIMLTIVDDLVS+D+LIE++LT EP NEY+QSCDI AFNKI
Sbjct: 179 LVPVGYGIKKLQIMLTIVDDLVSVDDLIEEQLTVEPTNEYVQSCDIVAFNKI 230


>gb|AFK44172.1| unknown [Medicago truncatula]
          Length = 231

 Score =  248 bits (633), Expect = 2e-63
 Identities = 134/232 (57%), Positives = 154/232 (66%)
 Frame = -3

Query: 919 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 740
           MA TF+N+ +  GLK+LD+YLL RSYITGYQASKDD+TVY A+ S PS EY NV+RW+ H
Sbjct: 1   MAVTFYNLKAESGLKKLDEYLLSRSYITGYQASKDDITVYSALPSVPSYEYGNVARWYKH 60

Query: 739 IDALLRIXXXXXXXXXXXXXGFAPPIDDKVATPATTDSKAXXXXXXXXXXXDLFXXXXXX 560
           IDALLRI               +   +D VATP  +D+KA           DLF      
Sbjct: 61  IDALLRISGVSGEGSGVTVES-SLVAEDAVATPPVSDTKAAEAEGDDDDDVDLFGEETEE 119

Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMEGLTWGASK 380
                                    VLLDVKPWDDETDMKKLEEAVRSV+MEGL WGASK
Sbjct: 120 EKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLFWGASK 179

Query: 379 LAPVGYGIKKLQIMLTIVDDLVSIDNLIEDRLTSEPANEYIQSCDIAAFNKI 224
           L PVGYGIKKLQIMLTIVDDLVS+D+++EDRLT+EP NEY+QSCDI AFNKI
Sbjct: 180 LVPVGYGIKKLQIMLTIVDDLVSVDDMVEDRLTAEPINEYVQSCDIVAFNKI 231


>dbj|BAJ22388.1| elongation factor 1 beta [Vigna unguiculata]
          Length = 230

 Score =  247 bits (631), Expect = 3e-63
 Identities = 136/232 (58%), Positives = 153/232 (65%)
 Frame = -3

Query: 919 MATTFFNVNSAPGLKRLDDYLLKRSYITGYQASKDDVTVYGAISSPPSSEYVNVSRWFAH 740
           MA TF++++SA GLK+LD+YLL RSYITGYQASKDD+TVY A+ + PS+EYVNVSRWF H
Sbjct: 1   MAVTFYDLSSASGLKKLDEYLLSRSYITGYQASKDDLTVYAALPTAPSAEYVNVSRWFKH 60

Query: 739 IDALLRIXXXXXXXXXXXXXGFAPPIDDKVATPATTDSKAXXXXXXXXXXXDLFXXXXXX 560
           IDALLRI             G    + + VATP   D+KA           DLF      
Sbjct: 61  IDALLRISGVSGEGSGVTVKGSF--VAEPVATPPAADTKAAAAEDDDDDDVDLFGEETEE 118

Query: 559 XXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMEGLTWGASK 380
                                    VLLDVKPWDDETDMKKLEEAVRSV MEGL WGASK
Sbjct: 119 EKKAAEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVSMEGLLWGASK 178

Query: 379 LAPVGYGIKKLQIMLTIVDDLVSIDNLIEDRLTSEPANEYIQSCDIAAFNKI 224
           L PVGYGIKKLQ+MLTIVDDLVS+D LIE+ LT EP NEY+QSCDI AFNKI
Sbjct: 179 LVPVGYGIKKLQVMLTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIVAFNKI 230


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