BLASTX nr result
ID: Coptis21_contig00001590
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001590 (620 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK23149.1| unknown [Picea sitchensis] gi|116783946|gb|ABK231... 194 8e-48 gb|AEO32892.1| hypothetical protein [Amblyomma maculatum] 193 2e-47 gb|ACF06511.1| structural constituent of ribosome [Elaeis guinee... 191 1e-46 gb|ABK21528.1| unknown [Picea sitchensis] gi|116790483|gb|ABK256... 190 2e-46 gb|AFK40371.1| unknown [Lotus japonicus] 187 1e-45 >gb|ABK23149.1| unknown [Picea sitchensis] gi|116783946|gb|ABK23153.1| unknown [Picea sitchensis] gi|116790874|gb|ABK25771.1| unknown [Picea sitchensis] gi|148906889|gb|ABR16590.1| unknown [Picea sitchensis] gi|148908303|gb|ABR17265.1| unknown [Picea sitchensis] Length = 122 Score = 194 bits (494), Expect = 8e-48 Identities = 99/121 (81%), Positives = 106/121 (87%) Frame = -1 Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432 MAM M KP K G E+ D HRIRITLSSKNVKNLEKVCADLV GAK + LKVKGPVRMP Sbjct: 1 MAMGMMKPMKAGLEDPQEDLHRIRITLSSKNVKNLEKVCADLVRGAKDKRLKVKGPVRMP 60 Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252 TKVL TTRK+PCGEGTNT+DRFE+RVHKR+IDL+SSSEVVKQITSI IEPGVEVEVTIA Sbjct: 61 TKVLNHTTRKSPCGEGTNTWDRFELRVHKRIIDLVSSSEVVKQITSITIEPGVEVEVTIA 120 Query: 251 D 249 D Sbjct: 121 D 121 >gb|AEO32892.1| hypothetical protein [Amblyomma maculatum] Length = 154 Score = 193 bits (490), Expect = 2e-47 Identities = 99/122 (81%), Positives = 104/122 (85%) Frame = -1 Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432 MA + KPAKQG EE HRIRITLSSKNVKNLEKVCADLV G K + L VKGPVRMP Sbjct: 33 MAYAAMKPAKQGLEESQEQLHRIRITLSSKNVKNLEKVCADLVRGGKDKQLTVKGPVRMP 92 Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252 TKVL ITTRK+PCGEGTNT+DRFE+RVHKRVIDL SS EVVKQITSI IEPGVEVEVTIA Sbjct: 93 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLTSSPEVVKQITSITIEPGVEVEVTIA 152 Query: 251 DP 246 DP Sbjct: 153 DP 154 >gb|ACF06511.1| structural constituent of ribosome [Elaeis guineensis] Length = 122 Score = 191 bits (484), Expect = 1e-46 Identities = 97/121 (80%), Positives = 105/121 (86%) Frame = -1 Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432 MA + KPAK G EE HRIRITLSSKNVKNLEKVCADLV GAK + L+VKGPVRMP Sbjct: 1 MAFAAMKPAKPGLEESQEQLHRIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60 Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252 TKVL ITTRK+PCGEGTNT+DRFE+RVH+RVIDL+SS EVVKQITSI IEPGVEVEVTIA Sbjct: 61 TKVLHITTRKSPCGEGTNTWDRFELRVHRRVIDLMSSPEVVKQITSITIEPGVEVEVTIA 120 Query: 251 D 249 D Sbjct: 121 D 121 >gb|ABK21528.1| unknown [Picea sitchensis] gi|116790483|gb|ABK25630.1| unknown [Picea sitchensis] gi|116790759|gb|ABK25729.1| unknown [Picea sitchensis] Length = 122 Score = 190 bits (483), Expect = 2e-46 Identities = 97/121 (80%), Positives = 105/121 (86%) Frame = -1 Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432 MAM M KP K G E+ + HRIRITLSSKNVKNLEKVC DLV GAK + LKVKGPVRMP Sbjct: 1 MAMGMIKPMKAGLEDPQEELHRIRITLSSKNVKNLEKVCGDLVRGAKDKRLKVKGPVRMP 60 Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252 TKVL TTRK+PCGEGTNT+DRFE+RVHKR+IDL+SSSEVVKQITSI IEPGVEVEVTIA Sbjct: 61 TKVLNHTTRKSPCGEGTNTWDRFELRVHKRIIDLVSSSEVVKQITSITIEPGVEVEVTIA 120 Query: 251 D 249 D Sbjct: 121 D 121 >gb|AFK40371.1| unknown [Lotus japonicus] Length = 122 Score = 187 bits (475), Expect = 1e-45 Identities = 94/121 (77%), Positives = 104/121 (85%) Frame = -1 Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432 MA KPAK GYEE G H+I ITLSSK+VKNLEKVC+DL+ GAK + L+VKGPVRMP Sbjct: 1 MAAFAMKPAKPGYEETGEQIHKIMITLSSKHVKNLEKVCSDLIRGAKDKRLRVKGPVRMP 60 Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252 TKVL ITTRK+PCGEGTNT+DRFE+RVHKRVIDL SS +VVKQITSI IEPGVEVEVTIA Sbjct: 61 TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120 Query: 251 D 249 D Sbjct: 121 D 121