BLASTX nr result

ID: Coptis21_contig00001590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001590
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23149.1| unknown [Picea sitchensis] gi|116783946|gb|ABK231...   194   8e-48
gb|AEO32892.1| hypothetical protein [Amblyomma maculatum]             193   2e-47
gb|ACF06511.1| structural constituent of ribosome [Elaeis guinee...   191   1e-46
gb|ABK21528.1| unknown [Picea sitchensis] gi|116790483|gb|ABK256...   190   2e-46
gb|AFK40371.1| unknown [Lotus japonicus]                              187   1e-45

>gb|ABK23149.1| unknown [Picea sitchensis] gi|116783946|gb|ABK23153.1| unknown
           [Picea sitchensis] gi|116790874|gb|ABK25771.1| unknown
           [Picea sitchensis] gi|148906889|gb|ABR16590.1| unknown
           [Picea sitchensis] gi|148908303|gb|ABR17265.1| unknown
           [Picea sitchensis]
          Length = 122

 Score =  194 bits (494), Expect = 8e-48
 Identities = 99/121 (81%), Positives = 106/121 (87%)
 Frame = -1

Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432
           MAM M KP K G E+   D HRIRITLSSKNVKNLEKVCADLV GAK + LKVKGPVRMP
Sbjct: 1   MAMGMMKPMKAGLEDPQEDLHRIRITLSSKNVKNLEKVCADLVRGAKDKRLKVKGPVRMP 60

Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252
           TKVL  TTRK+PCGEGTNT+DRFE+RVHKR+IDL+SSSEVVKQITSI IEPGVEVEVTIA
Sbjct: 61  TKVLNHTTRKSPCGEGTNTWDRFELRVHKRIIDLVSSSEVVKQITSITIEPGVEVEVTIA 120

Query: 251 D 249
           D
Sbjct: 121 D 121


>gb|AEO32892.1| hypothetical protein [Amblyomma maculatum]
          Length = 154

 Score =  193 bits (490), Expect = 2e-47
 Identities = 99/122 (81%), Positives = 104/122 (85%)
 Frame = -1

Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432
           MA +  KPAKQG EE     HRIRITLSSKNVKNLEKVCADLV G K + L VKGPVRMP
Sbjct: 33  MAYAAMKPAKQGLEESQEQLHRIRITLSSKNVKNLEKVCADLVRGGKDKQLTVKGPVRMP 92

Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252
           TKVL ITTRK+PCGEGTNT+DRFE+RVHKRVIDL SS EVVKQITSI IEPGVEVEVTIA
Sbjct: 93  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLTSSPEVVKQITSITIEPGVEVEVTIA 152

Query: 251 DP 246
           DP
Sbjct: 153 DP 154


>gb|ACF06511.1| structural constituent of ribosome [Elaeis guineensis]
          Length = 122

 Score =  191 bits (484), Expect = 1e-46
 Identities = 97/121 (80%), Positives = 105/121 (86%)
 Frame = -1

Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432
           MA +  KPAK G EE     HRIRITLSSKNVKNLEKVCADLV GAK + L+VKGPVRMP
Sbjct: 1   MAFAAMKPAKPGLEESQEQLHRIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMP 60

Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252
           TKVL ITTRK+PCGEGTNT+DRFE+RVH+RVIDL+SS EVVKQITSI IEPGVEVEVTIA
Sbjct: 61  TKVLHITTRKSPCGEGTNTWDRFELRVHRRVIDLMSSPEVVKQITSITIEPGVEVEVTIA 120

Query: 251 D 249
           D
Sbjct: 121 D 121


>gb|ABK21528.1| unknown [Picea sitchensis] gi|116790483|gb|ABK25630.1| unknown
           [Picea sitchensis] gi|116790759|gb|ABK25729.1| unknown
           [Picea sitchensis]
          Length = 122

 Score =  190 bits (483), Expect = 2e-46
 Identities = 97/121 (80%), Positives = 105/121 (86%)
 Frame = -1

Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432
           MAM M KP K G E+   + HRIRITLSSKNVKNLEKVC DLV GAK + LKVKGPVRMP
Sbjct: 1   MAMGMIKPMKAGLEDPQEELHRIRITLSSKNVKNLEKVCGDLVRGAKDKRLKVKGPVRMP 60

Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252
           TKVL  TTRK+PCGEGTNT+DRFE+RVHKR+IDL+SSSEVVKQITSI IEPGVEVEVTIA
Sbjct: 61  TKVLNHTTRKSPCGEGTNTWDRFELRVHKRIIDLVSSSEVVKQITSITIEPGVEVEVTIA 120

Query: 251 D 249
           D
Sbjct: 121 D 121


>gb|AFK40371.1| unknown [Lotus japonicus]
          Length = 122

 Score =  187 bits (475), Expect = 1e-45
 Identities = 94/121 (77%), Positives = 104/121 (85%)
 Frame = -1

Query: 611 MAMSMQKPAKQGYEEQGPDEHRIRITLSSKNVKNLEKVCADLVTGAKTRTLKVKGPVRMP 432
           MA    KPAK GYEE G   H+I ITLSSK+VKNLEKVC+DL+ GAK + L+VKGPVRMP
Sbjct: 1   MAAFAMKPAKPGYEETGEQIHKIMITLSSKHVKNLEKVCSDLIRGAKDKRLRVKGPVRMP 60

Query: 431 TKVLKITTRKAPCGEGTNTFDRFEMRVHKRVIDLLSSSEVVKQITSIQIEPGVEVEVTIA 252
           TKVL ITTRK+PCGEGTNT+DRFE+RVHKRVIDL SS +VVKQITSI IEPGVEVEVTIA
Sbjct: 61  TKVLNITTRKSPCGEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIA 120

Query: 251 D 249
           D
Sbjct: 121 D 121


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