BLASTX nr result

ID: Coptis21_contig00001588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001588
         (933 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632316.1| PREDICTED: proteasome subunit beta type-2-A-...   365   6e-99
ref|NP_001238480.1| uncharacterized protein LOC100306158 [Glycin...   364   1e-98
ref|NP_001235342.1| uncharacterized protein LOC100499738 [Glycin...   364   2e-98
gb|AFK44947.1| unknown [Medicago truncatula]                          362   5e-98
ref|XP_003610773.1| Proteasome subunit beta type [Medicago trunc...   362   5e-98

>ref|XP_003632316.1| PREDICTED: proteasome subunit beta type-2-A-like [Vitis vinifera]
           gi|147843860|emb|CAN79443.1| hypothetical protein
           VITISV_006154 [Vitis vinifera]
          Length = 205

 Score =  365 bits (938), Expect = 6e-99
 Identities = 179/198 (90%), Positives = 192/198 (96%)
 Frame = +3

Query: 84  MECVFGLVGKGFALVVADTSAVNSILVHKSNEDKIMVLDSHKLLGASGESGDRAQFTEFV 263
           MECVFGLVG GFALVVAD+SAV+SILVHKSNEDKIMVLDSHKLLGASGE GDRAQFTE++
Sbjct: 1   MECVFGLVGDGFALVVADSSAVHSILVHKSNEDKIMVLDSHKLLGASGEGGDRAQFTEYI 60

Query: 264 QKNVALYQFRNGIPLTTSATANFTRGELAKALRKSPYSVNILLAGYDEETGPSLYYIDYI 443
           QKNVALYQFRNGIPLTT+A ANFTRGELA ALRK+PY+VNILLAGYD++ GPSLYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYAVNILLAGYDKDIGPSLYYIDYI 120

Query: 444 ATCHKIEKGAFGYGSYFSLAMMDRHYHSGMSVEEAVDLVDKCILEIRTRLVVAPPNFVIK 623
           A+ HKIEKGAFGYGSYFSLAMMDRHYHSGM+VEEAVDLVDKCI+EIR+RLVVAPPNFVIK
Sbjct: 121 ASLHKIEKGAFGYGSYFSLAMMDRHYHSGMTVEEAVDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 624 IVDKDGAREYAWRESIKD 677
           IVDKDGAREYAWRESIKD
Sbjct: 181 IVDKDGAREYAWRESIKD 198


>ref|NP_001238480.1| uncharacterized protein LOC100306158 [Glycine max]
           gi|255627727|gb|ACU14208.1| unknown [Glycine max]
          Length = 204

 Score =  364 bits (935), Expect = 1e-98
 Identities = 177/204 (86%), Positives = 193/204 (94%)
 Frame = +3

Query: 84  MECVFGLVGKGFALVVADTSAVNSILVHKSNEDKIMVLDSHKLLGASGESGDRAQFTEFV 263
           MECVFGLVG GFA+VVAD+SAV+SILVHKSNEDKIM+LDSHKL+ ASGE GDR QFTE++
Sbjct: 1   MECVFGLVGNGFAIVVADSSAVHSILVHKSNEDKIMLLDSHKLIAASGEPGDRVQFTEYI 60

Query: 264 QKNVALYQFRNGIPLTTSATANFTRGELAKALRKSPYSVNILLAGYDEETGPSLYYIDYI 443
           QKNVALYQFRNGIPLTT+A ANFTRGELA ALRK+PYSVNILLAGYD+ETGP LYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPELYYIDYI 120

Query: 444 ATCHKIEKGAFGYGSYFSLAMMDRHYHSGMSVEEAVDLVDKCILEIRTRLVVAPPNFVIK 623
           AT HK+EKGAFGYGSYFSL+MMDRHYHSGMSVEEAVDLVDKCI+EIR+RLVVAPPNFVIK
Sbjct: 121 ATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAVDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 624 IVDKDGAREYAWRESIKDAGVVTA 695
           IVDKDGAREYAWRES+KD  V +A
Sbjct: 181 IVDKDGAREYAWRESVKDVPVPSA 204


>ref|NP_001235342.1| uncharacterized protein LOC100499738 [Glycine max]
           gi|255626205|gb|ACU13447.1| unknown [Glycine max]
          Length = 204

 Score =  364 bits (934), Expect = 2e-98
 Identities = 176/204 (86%), Positives = 193/204 (94%)
 Frame = +3

Query: 84  MECVFGLVGKGFALVVADTSAVNSILVHKSNEDKIMVLDSHKLLGASGESGDRAQFTEFV 263
           MECVFGLVG GFA+VVAD+SAV+SILVHKSNEDKIM+LDSHKL+ ASGE GDR QFTE++
Sbjct: 1   MECVFGLVGNGFAIVVADSSAVHSILVHKSNEDKIMLLDSHKLIAASGEPGDRVQFTEYI 60

Query: 264 QKNVALYQFRNGIPLTTSATANFTRGELAKALRKSPYSVNILLAGYDEETGPSLYYIDYI 443
           QKNVALYQFRNGIPLTT+A ANFTRGELA ALRK+PYSVNILLAGYD+ETGP LYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPELYYIDYI 120

Query: 444 ATCHKIEKGAFGYGSYFSLAMMDRHYHSGMSVEEAVDLVDKCILEIRTRLVVAPPNFVIK 623
           AT HK+EKGAFGYGSYFSL+MMDRHYHSGMSVEEA+DLVDKCI+EIR+RLVVAPPNFVIK
Sbjct: 121 ATLHKLEKGAFGYGSYFSLSMMDRHYHSGMSVEEAIDLVDKCIMEIRSRLVVAPPNFVIK 180

Query: 624 IVDKDGAREYAWRESIKDAGVVTA 695
           IVDKDGAREYAWRES+KD  V +A
Sbjct: 181 IVDKDGAREYAWRESVKDTPVPSA 204


>gb|AFK44947.1| unknown [Medicago truncatula]
          Length = 203

 Score =  362 bits (930), Expect = 5e-98
 Identities = 175/198 (88%), Positives = 190/198 (95%)
 Frame = +3

Query: 84  MECVFGLVGKGFALVVADTSAVNSILVHKSNEDKIMVLDSHKLLGASGESGDRAQFTEFV 263
           MECVFGLVG GFA+VVADTSAV+SILVHKSNEDKIM LDSHKL+ ASGE GDR QFTE++
Sbjct: 1   MECVFGLVGNGFAIVVADTSAVHSILVHKSNEDKIMFLDSHKLIAASGEPGDRVQFTEYI 60

Query: 264 QKNVALYQFRNGIPLTTSATANFTRGELAKALRKSPYSVNILLAGYDEETGPSLYYIDYI 443
           QKNVALYQFRNGIPLTT+A ANFTRGELA ALRK+PYSVNILLAGYD+ETGPSLYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTTAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 444 ATCHKIEKGAFGYGSYFSLAMMDRHYHSGMSVEEAVDLVDKCILEIRTRLVVAPPNFVIK 623
           AT HK+EKGAFGYGSYFSL+MMDRH+HSGM+VEEA+DLVDKCILEIR+RLVVAPPNFVIK
Sbjct: 121 ATLHKLEKGAFGYGSYFSLSMMDRHFHSGMNVEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 624 IVDKDGAREYAWRESIKD 677
           IVDKDGAREYAWRES+KD
Sbjct: 181 IVDKDGAREYAWRESVKD 198


>ref|XP_003610773.1| Proteasome subunit beta type [Medicago truncatula]
           gi|355512108|gb|AES93731.1| Proteasome subunit beta type
           [Medicago truncatula]
          Length = 203

 Score =  362 bits (930), Expect = 5e-98
 Identities = 175/198 (88%), Positives = 190/198 (95%)
 Frame = +3

Query: 84  MECVFGLVGKGFALVVADTSAVNSILVHKSNEDKIMVLDSHKLLGASGESGDRAQFTEFV 263
           MECVFGLVG GFA+VVADTSAV+SILVHKSNEDKIM LDSHKL+ ASGE GDR QFTE++
Sbjct: 1   MECVFGLVGNGFAIVVADTSAVHSILVHKSNEDKIMFLDSHKLIAASGEPGDRVQFTEYI 60

Query: 264 QKNVALYQFRNGIPLTTSATANFTRGELAKALRKSPYSVNILLAGYDEETGPSLYYIDYI 443
           QKNVALYQFRNGIPLTT+A ANFTRGELA ALRK+PYSVNILLAGYD+ETGPSLYYIDYI
Sbjct: 61  QKNVALYQFRNGIPLTTAAAANFTRGELATALRKNPYSVNILLAGYDKETGPSLYYIDYI 120

Query: 444 ATCHKIEKGAFGYGSYFSLAMMDRHYHSGMSVEEAVDLVDKCILEIRTRLVVAPPNFVIK 623
           AT HK+EKGAFGYGSYFSL+MMDRH+HSGM+VEEA+DLVDKCILEIR+RLVVAPPNFVIK
Sbjct: 121 ATLHKLEKGAFGYGSYFSLSMMDRHFHSGMNVEEAIDLVDKCILEIRSRLVVAPPNFVIK 180

Query: 624 IVDKDGAREYAWRESIKD 677
           IVDKDGAREYAWRES+KD
Sbjct: 181 IVDKDGAREYAWRESVKD 198


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