BLASTX nr result

ID: Coptis21_contig00001585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001585
         (596 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [V...   159   4e-37
gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]          150   2e-34
gb|ACP43315.1| 20S proteasome beta subunit 5 [Citrus maxima]          150   2e-34
ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-li...   149   5e-34
ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-li...   149   5e-34

>ref|XP_002264828.1| PREDICTED: proteasome subunit beta type-5 [Vitis vinifera]
           gi|297738390|emb|CBI27591.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  159 bits (401), Expect = 4e-37
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = -2

Query: 595 VLDNGYRYDMSIEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 416
           VLDNGYRYDMS+EEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY
Sbjct: 193 VLDNGYRYDMSVEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 252

Query: 415 KYYPVVPAIVEQEMADVAGA 356
           KYYPV+P+ VEQEM +VAGA
Sbjct: 253 KYYPVMPSTVEQEMVEVAGA 272


>gb|ACP43316.1| 20S proteasome beta subunit 5 [Citrus maxima]
          Length = 194

 Score =  150 bits (378), Expect = 2e-34
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = -2

Query: 595 VLDNGYRYDMSIEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 416
           VLD+GY++DMSIEEAAELARR+IYHATFRD ASGGVASVYYVGPNGWKKLSGDDVGELHY
Sbjct: 115 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 174

Query: 415 KYYPVVPAIVEQEMADVAGA 356
            YYPV P+ VEQEMA+VAGA
Sbjct: 175 HYYPVTPSTVEQEMAEVAGA 194


>gb|ACP43315.1| 20S proteasome beta subunit 5 [Citrus maxima]
          Length = 272

 Score =  150 bits (378), Expect = 2e-34
 Identities = 70/80 (87%), Positives = 76/80 (95%)
 Frame = -2

Query: 595 VLDNGYRYDMSIEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 416
           VLD+GY++DMSIEEAAELARR+IYHATFRD ASGGVASVYYVGPNGWKKLSGDDVGELHY
Sbjct: 193 VLDSGYKFDMSIEEAAELARRAIYHATFRDAASGGVASVYYVGPNGWKKLSGDDVGELHY 252

Query: 415 KYYPVVPAIVEQEMADVAGA 356
            YYPV P+ VEQEMA+VAGA
Sbjct: 253 HYYPVTPSTVEQEMAEVAGA 272


>ref|XP_004144192.1| PREDICTED: proteasome subunit beta type-5-like [Cucumis sativus]
           gi|449529978|ref|XP_004171974.1| PREDICTED: proteasome
           subunit beta type-5-like [Cucumis sativus]
          Length = 272

 Score =  149 bits (375), Expect = 5e-34
 Identities = 68/80 (85%), Positives = 73/80 (91%)
 Frame = -2

Query: 595 VLDNGYRYDMSIEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 416
           VLDNGYRYD+S+EEAAELARR+IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY
Sbjct: 193 VLDNGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 252

Query: 415 KYYPVVPAIVEQEMADVAGA 356
            YYPV P  V+QEM +V  A
Sbjct: 253 NYYPVTPTTVDQEMTEVTAA 272


>ref|XP_003526966.1| PREDICTED: proteasome subunit beta type-5-like [Glycine max]
          Length = 272

 Score =  149 bits (375), Expect = 5e-34
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = -2

Query: 595 VLDNGYRYDMSIEEAAELARRSIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 416
           VLD+GYRYD+S+EEAAELARR+IYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY
Sbjct: 193 VLDSGYRYDLSVEEAAELARRAIYHATFRDGASGGVASVYYVGPNGWKKLSGDDVGELHY 252

Query: 415 KYYPVVPAIVEQEMADVAGA 356
            YYPV P+ VEQEM +  GA
Sbjct: 253 HYYPVTPSTVEQEMVEATGA 272


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