BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001559
         (736 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B ...   107   3e-21
gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanu...   106   6e-21
emb|CBI17057.3| unnamed protein product [Vitis vinifera]              105   7e-21
gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]   105   1e-20
ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B ...   105   1e-20

>ref|XP_002283025.1| PREDICTED: 60S acidic ribosomal protein P2B [Vitis vinifera]
           gi|297740089|emb|CBI30271.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  107 bits (266), Expect = 3e-21
 Identities = 55/62 (88%), Positives = 58/62 (93%)
 Frame = -2

Query: 693 MKVVAAYLLAVLGGNTQPSATDLKSILGSVGAEADDDKIELLLSQVKGKDITELIACGRE 514
           MKV+AAYLLAVLGGNT PSA DLK ILGSVGAEADDD+IELLLS+VKGKDITELIA GRE
Sbjct: 1   MKVIAAYLLAVLGGNTCPSANDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 513 KL 508
           KL
Sbjct: 61  KL 62


>gb|ABA40434.1| 60s acidic ribosomal protein-like protein [Solanum tuberosum]
          Length = 115

 Score =  106 bits (264), Expect = 6e-21
 Identities = 54/62 (87%), Positives = 57/62 (91%)
 Frame = -2

Query: 693 MKVVAAYLLAVLGGNTQPSATDLKSILGSVGAEADDDKIELLLSQVKGKDITELIACGRE 514
           MKV+A+YLLAVLGGNT PSA DLK IL SVGAEADDD+IELLLSQVKGKDITELIA GRE
Sbjct: 1   MKVIASYLLAVLGGNTSPSAADLKKILASVGAEADDDRIELLLSQVKGKDITELIAAGRE 60

Query: 513 KL 508
           KL
Sbjct: 61  KL 62


>emb|CBI17057.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  105 bits (263), Expect = 7e-21
 Identities = 55/66 (83%), Positives = 59/66 (89%)
 Frame = -2

Query: 705 SWKNMKVVAAYLLAVLGGNTQPSATDLKSILGSVGAEADDDKIELLLSQVKGKDITELIA 526
           S   MKV+AAYLLAVLGGNT PSA DLK ILGSVGAEADDD+IELLL++VKGKDITELIA
Sbjct: 29  SHHKMKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIA 88

Query: 525 CGREKL 508
            GREKL
Sbjct: 89  SGREKL 94


>gb|AGE46033.1| 60S acidic ribosomal protein P2B [Elaeis guineensis]
          Length = 112

 Score =  105 bits (262), Expect = 1e-20
 Identities = 55/61 (90%), Positives = 57/61 (93%)
 Frame = -2

Query: 693 MKVVAAYLLAVLGGNTQPSATDLKSILGSVGAEADDDKIELLLSQVKGKDITELIACGRE 514
           MKVVAAYLLAVLGGNT PSA DLK ILGSVGAEADDD+IELLLS+VKGKDITELIA GRE
Sbjct: 1   MKVVAAYLLAVLGGNTCPSADDLKDILGSVGAEADDDRIELLLSEVKGKDITELIASGRE 60

Query: 513 K 511
           K
Sbjct: 61  K 61


>ref|XP_002266030.1| PREDICTED: 60S acidic ribosomal protein P2B isoform 1 [Vitis
           vinifera] gi|147767214|emb|CAN73396.1| hypothetical
           protein VITISV_003816 [Vitis vinifera]
           gi|147782772|emb|CAN65595.1| hypothetical protein
           VITISV_030546 [Vitis vinifera]
          Length = 113

 Score =  105 bits (262), Expect = 1e-20
 Identities = 54/62 (87%), Positives = 58/62 (93%)
 Frame = -2

Query: 693 MKVVAAYLLAVLGGNTQPSATDLKSILGSVGAEADDDKIELLLSQVKGKDITELIACGRE 514
           MKV+AAYLLAVLGGNT PSA DLK ILGSVGAEADDD+IELLL++VKGKDITELIA GRE
Sbjct: 1   MKVIAAYLLAVLGGNTCPSAEDLKDILGSVGAEADDDRIELLLAEVKGKDITELIASGRE 60

Query: 513 KL 508
           KL
Sbjct: 61  KL 62