BLASTX nr result

ID: Coptis21_contig00001553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001553
         (1198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   285   2e-74
ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   283   8e-74
emb|CBI15306.3| unnamed protein product [Vitis vinifera]              281   2e-73
ref|XP_004138292.1| PREDICTED: 5-formyltetrahydrofolate cyclo-li...   281   3e-73
ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Popul...   276   7e-72

>ref|XP_002266146.2| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase [Vitis vinifera]
          Length = 273

 Score =  285 bits (728), Expect = 2e-74
 Identities = 151/273 (55%), Positives = 193/273 (70%), Gaps = 5/273 (1%)
 Frame = +1

Query: 193 MTQKFYTSTQQPLFSPRLIRSFPESHSHPSLVTMT-----SKDPHLDAIFDQKRAVRSKV 357
           + Q  + S   PL +PR            S+VTMT     S + HL+A+F QK+ +RS V
Sbjct: 11  LAQAPFCSLFNPLPAPR------------SIVTMTNNTHQSSNTHLEAVFKQKKILRSSV 58

Query: 358 RKELKGMSPKQRAEQDAAIQKIILDSSWYKASHRLCAYISCNALREVDTSEILSDILCHH 537
           RK LKGM P  R+++D A+Q IIL++ W+++S RLCAYISC++LREVDTS++LS+IL + 
Sbjct: 59  RKALKGMDPSSRSQEDNAVQNIILEAPWFRSSQRLCAYISCSSLREVDTSKVLSEILQNP 118

Query: 538 QKEGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILEPSVVDPDGNQRENVME 717
            K+G   + KKLYVPRVEDKNSYMRML I+  +DL++NSM+ILEP+ VD DGN+RE+VM+
Sbjct: 119 AKDGHTQMGKKLYVPRVEDKNSYMRMLNITHMDDLISNSMNILEPAPVDGDGNEREDVMQ 178

Query: 718 ANDPVDLLLLPXXXXXXXXXXXXXXXXXXXTFLKKYQELSLERKWKQPLLVALSYNLQIL 897
           A DPVDLLLLP                    FLK Y EL  ER WKQPLLVALSY++QI+
Sbjct: 179 ATDPVDLLLLPGLAFDKSGRRLGRGGGYYDAFLKNYLELVKERNWKQPLLVALSYSVQIM 238

Query: 898 DDGLIPVTPSDVLVDALVSPTGVIPISPAAIER 996
           D+G+IPVTP+DV VDALVSP GVIPI+ AA ER
Sbjct: 239 DEGVIPVTPNDVPVDALVSPAGVIPITTAAQER 271


>ref|XP_004155072.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis
           sativus]
          Length = 337

 Score =  283 bits (723), Expect = 8e-74
 Identities = 149/286 (52%), Positives = 192/286 (67%), Gaps = 4/286 (1%)
 Frame = +1

Query: 154 APLLLLHRAKLAAMTQKFYTSTQQPLFSPRLIRSFPESHSHPSLVTMTSKDPH----LDA 321
           AP+L  ++  L       +   Q   F   L      S  +P + T  S  P     L  
Sbjct: 53  APMLRNYKPLLPIAANSLFNHIQSSAFQQSLPPLSRFSSGYPKMATNESIKPENEDQLKH 112

Query: 322 IFDQKRAVRSKVRKELKGMSPKQRAEQDAAIQKIILDSSWYKASHRLCAYISCNALREVD 501
           IFDQKR +RS VRK LK M P  R+++D  IQ I+L++ W+K+S RLCAY+SC+ALREVD
Sbjct: 113 IFDQKRVLRSSVRKALKAMDPSFRSQEDNVIQSIVLEAPWFKSSQRLCAYVSCSALREVD 172

Query: 502 TSEILSDILCHHQKEGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILEPSVV 681
           TS +LS+IL H  K+G +   KK+YVPRVEDKNS+MRM  IS  +DL+ANSM+ILEP+ V
Sbjct: 173 TSRLLSEILQHPPKDGHS---KKIYVPRVEDKNSHMRMFNISRMDDLIANSMNILEPAPV 229

Query: 682 DPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXXTFLKKYQELSLERKWKQP 861
           D DGN+RE+VM+  DP+DL LLP                   TFLKKYQEL+  R WKQP
Sbjct: 230 DGDGNEREDVMQTKDPIDLFLLPGLAFDKSGRRLGRGGGYYDTFLKKYQELAKARNWKQP 289

Query: 862 LLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIERM 999
           LLVALSY++QI+D+G+IP+TP+DVLVDALVSP+GVIPIS A +++M
Sbjct: 290 LLVALSYSVQIMDEGIIPLTPNDVLVDALVSPSGVIPISSAGLDKM 335


>emb|CBI15306.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  281 bits (720), Expect = 2e-73
 Identities = 141/236 (59%), Positives = 179/236 (75%)
 Frame = +1

Query: 289 TMTSKDPHLDAIFDQKRAVRSKVRKELKGMSPKQRAEQDAAIQKIILDSSWYKASHRLCA 468
           T  S + HL+A+F QK+ +RS VRK LKGM P  R+++D A+Q IIL++ W+++S RLCA
Sbjct: 5   THQSSNTHLEAVFKQKKILRSSVRKALKGMDPSSRSQEDNAVQNIILEAPWFRSSQRLCA 64

Query: 469 YISCNALREVDTSEILSDILCHHQKEGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVA 648
           YISC++LREVDTS++LS+IL +  K+G   + KKLYVPRVEDKNSYMRML I+  +DL++
Sbjct: 65  YISCSSLREVDTSKVLSEILQNPAKDGHTQMGKKLYVPRVEDKNSYMRMLNITHMDDLIS 124

Query: 649 NSMSILEPSVVDPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXXTFLKKYQ 828
           NSM+ILEP+ VD DGN+RE+VM+A DPVDLLLLP                    FLK Y 
Sbjct: 125 NSMNILEPAPVDGDGNEREDVMQATDPVDLLLLPGLAFDKSGRRLGRGGGYYDAFLKNYL 184

Query: 829 ELSLERKWKQPLLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIER 996
           EL  ER WKQPLLVALSY++QI+D+G+IPVTP+DV VDALVSP GVIPI+ AA ER
Sbjct: 185 ELVKERNWKQPLLVALSYSVQIMDEGVIPVTPNDVPVDALVSPAGVIPITTAAQER 240


>ref|XP_004138292.1| PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like [Cucumis
           sativus]
          Length = 337

 Score =  281 bits (718), Expect = 3e-73
 Identities = 148/286 (51%), Positives = 191/286 (66%), Gaps = 4/286 (1%)
 Frame = +1

Query: 154 APLLLLHRAKLAAMTQKFYTSTQQPLFSPRLIRSFPESHSHPSLVTMTSKDPH----LDA 321
           AP+L  ++  L       +   Q   F   L      S  +P + T  S  P     L  
Sbjct: 53  APMLRNYKPLLPIAANSLFNHIQSSAFQQSLPPLSRFSSGYPKMATNESIKPENEDQLKH 112

Query: 322 IFDQKRAVRSKVRKELKGMSPKQRAEQDAAIQKIILDSSWYKASHRLCAYISCNALREVD 501
           IFDQKR +RS VRK LK M P  R+++D  IQ I+L++ W+K+S RLCAY+SC+ALREVD
Sbjct: 113 IFDQKRVLRSSVRKALKAMDPSFRSQEDNVIQSIVLEAPWFKSSQRLCAYVSCSALREVD 172

Query: 502 TSEILSDILCHHQKEGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILEPSVV 681
           TS +LS+IL H  K+G +   KK+YVPRVEDKNS+MRM  IS  +DL+ANSM+ILEP+ V
Sbjct: 173 TSRLLSEILQHPPKDGHS---KKIYVPRVEDKNSHMRMFNISRMDDLIANSMNILEPAPV 229

Query: 682 DPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXXTFLKKYQELSLERKWKQP 861
           D DGN+RE+VM+  DP+DL LLP                   TFLK YQEL+  R WKQP
Sbjct: 230 DGDGNEREDVMQTKDPIDLFLLPGLAFDKSGRRLGRGGGYYDTFLKNYQELAKARNWKQP 289

Query: 862 LLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIERM 999
           LLVALSY++QI+D+G+IP+TP+DVLVDALVSP+GVIPIS A +++M
Sbjct: 290 LLVALSYSVQIMDEGIIPLTPNDVLVDALVSPSGVIPISSAGLDKM 335


>ref|XP_002318620.1| 5-formyltetrahydrofolate cyclo-ligase [Populus trichocarpa]
           gi|222859293|gb|EEE96840.1| 5-formyltetrahydrofolate
           cyclo-ligase [Populus trichocarpa]
          Length = 276

 Score =  276 bits (706), Expect = 7e-72
 Identities = 141/230 (61%), Positives = 173/230 (75%)
 Frame = +1

Query: 310 HLDAIFDQKRAVRSKVRKELKGMSPKQRAEQDAAIQKIILDSSWYKASHRLCAYISCNAL 489
           +LD IF QK+ +RSKVRK LK M P  R+++D AIQ ++L++ W+K+S RLCAYI+C+AL
Sbjct: 45  NLDGIFKQKQVLRSKVRKSLKSMDPSLRSQEDDAIQSLVLEAPWFKSSQRLCAYITCSAL 104

Query: 490 REVDTSEILSDILCHHQKEGRAHIRKKLYVPRVEDKNSYMRMLYISSTEDLVANSMSILE 669
           REVDTS++LS IL +  K+G     KKLYVPRVEDKNS+MRML ISS +DL+ANSM ILE
Sbjct: 105 REVDTSKLLSQILQNPTKDGSVENAKKLYVPRVEDKNSHMRMLNISSMDDLIANSMDILE 164

Query: 670 PSVVDPDGNQRENVMEANDPVDLLLLPXXXXXXXXXXXXXXXXXXXTFLKKYQELSLERK 849
           P+ VD  GN RE+VM+ANDPVDL LLP                   TFL+KYQEL+ ER 
Sbjct: 165 PAPVDQHGNAREDVMQANDPVDLFLLPGLAFDKSGRRLGRGGGYYDTFLRKYQELAEERD 224

Query: 850 WKQPLLVALSYNLQILDDGLIPVTPSDVLVDALVSPTGVIPISPAAIERM 999
           W+QPLLVALSY+LQI+DDG IPVT +D+ VD LVSP GVIPIS AA+ RM
Sbjct: 225 WRQPLLVALSYSLQIIDDGAIPVTLNDLPVDVLVSPAGVIPISQAALNRM 274


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