BLASTX nr result

ID: Coptis21_contig00001540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001540
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ40867.1| transcriptional factor MYB-1 [Coptis japonica]        541   e-151
ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis...   368   2e-99
gb|AAY28930.1| sucrose responsive element binding protein [Vitis...   365   2e-98
ref|XP_002285015.1| PREDICTED: transcription factor MYB44-like [...   328   2e-87
ref|NP_001235142.1| MYB transcription factor MYB112 [Glycine max...   327   4e-87

>dbj|BAJ40867.1| transcriptional factor MYB-1 [Coptis japonica]
          Length = 312

 Score =  541 bits (1395), Expect = e-151
 Identities = 278/312 (89%), Positives = 280/312 (89%)
 Frame = -3

Query: 1271 MASITSSRRDLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQ 1092
            MASI+SSRRDLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQ
Sbjct: 1    MASISSSRRDLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQ 60

Query: 1091 LSPQVEHRAFSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASGED 912
            LSPQVEHRAFSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASGED
Sbjct: 61   LSPQVEHRAFSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASGED 120

Query: 911  IFIDGLTRPFKRSASVGAVAPYGSGLYLXXXXXXXXXXXXXXXXXXXXGHVYRPVARTGG 732
            IFIDGLTRPFKRSASVGAVAPYGSGLYL                    GHVYRPVARTGG
Sbjct: 121  IFIDGLTRPFKRSASVGAVAPYGSGLYLSPSSPCGSDVSDSSLPGSSSGHVYRPVARTGG 180

Query: 731  ILQIETSSSTNDPPTSLSLSLPGTDSCEVSNQAMKTQSVDQIPSALPMQQFPLLQQXXXX 552
            ILQIETSSSTNDPPTSLSLSLPGTDSCEVSNQAMKTQSVDQIPSALPMQQFPLLQQ    
Sbjct: 181  ILQIETSSSTNDPPTSLSLSLPGTDSCEVSNQAMKTQSVDQIPSALPMQQFPLLQQNSSN 240

Query: 551  XXXXXXXXSPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAVEQNGGMCSSQAVDGIRN 372
                    SPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSA+EQNGGMCSSQAVDGIRN
Sbjct: 241  MVSSDISVSPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAMEQNGGMCSSQAVDGIRN 300

Query: 371  ALVKRIGITKIE 336
            ALVKRIGITKIE
Sbjct: 301  ALVKRIGITKIE 312


>ref|XP_002283347.1| PREDICTED: transcription factor MYB44 [Vitis vinifera]
          Length = 312

 Score =  368 bits (945), Expect = 2e-99
 Identities = 204/319 (63%), Positives = 228/319 (71%), Gaps = 10/319 (3%)
 Frame = -3

Query: 1262 ITSSRRDLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 1083
            + ++R+D+DRIKGPWSPEEDD L KLV KHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
Sbjct: 1    MAATRKDVDRIKGPWSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 60

Query: 1082 QVEHRAFSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASG--EDI 909
            QVEHRAF+SEEDDTI+RAHA+FGNKWATIARLL+GRTDNAIKNHWNSTLKRK S   ED 
Sbjct: 61   QVEHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAITEDG 120

Query: 908  FIDG--LTRPFKRSASVGAVAPYGSGLYLXXXXXXXXXXXXXXXXXXXXGHVYRPVARTG 735
               G     P KRS S GA AP  SGLYL                     HVYRPVARTG
Sbjct: 121  SFGGDYPPHPLKRSVSAGAAAPV-SGLYLSPSSPCGSDVSDSSLPVVSSSHVYRPVARTG 179

Query: 734  GILQIETSSSTNDPPTSLSLSLPGTDSCEVSNQAMK------TQSVDQIPSALPMQQFPL 573
            GI+  ET+SS+NDPPTSLSLSLPG DSCEVSN+A +         +  IP+  P+QQ P 
Sbjct: 180  GIIPPETTSSSNDPPTSLSLSLPGVDSCEVSNRAPEPNHAPPANPIQMIPTMAPLQQIP- 238

Query: 572  LQQXXXXXXXXXXXXSPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAVEQNGGMCSSQ 393
            + Q            S  EKP +   FSAE LAVMQEMI+KEVRNYM+ +EQN G+C   
Sbjct: 239  MHQHNQPATVPATVLSQGEKPFI--PFSAELLAVMQEMIRKEVRNYMAGLEQN-GVCLQ- 294

Query: 392  AVDGIRNALVKRIGITKIE 336
              DGIRNA VKRIGI+KIE
Sbjct: 295  -ADGIRNAAVKRIGISKIE 312


>gb|AAY28930.1| sucrose responsive element binding protein [Vitis vinifera]
          Length = 312

 Score =  365 bits (937), Expect = 2e-98
 Identities = 203/319 (63%), Positives = 226/319 (70%), Gaps = 10/319 (3%)
 Frame = -3

Query: 1262 ITSSRRDLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 1083
            + ++R+D DRIKGPWSPEEDD L KLV KHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
Sbjct: 1    MAATRKDADRIKGPWSPEEDDALQKLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 60

Query: 1082 QVEHRAFSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASG--EDI 909
            QVEHRAF+SEEDDTI+RAHA+FGNKWATIARLL+GRTDNAIKNHWNSTLKRK S   ED 
Sbjct: 61   QVEHRAFTSEEDDTIMRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCSAITEDG 120

Query: 908  FIDG--LTRPFKRSASVGAVAPYGSGLYLXXXXXXXXXXXXXXXXXXXXGHVYRPVARTG 735
               G     P KRS S GA AP  SGLYL                     HVYRPVARTG
Sbjct: 121  SFGGDYPPHPLKRSVSAGAAAPV-SGLYLSPSSPCGSDVSDSSLPVVSSSHVYRPVARTG 179

Query: 734  GILQIETSSSTNDPPTSLSLSLPGTDSCEVSNQAMK------TQSVDQIPSALPMQQFPL 573
            GI+  ET+SS+NDPPTSLSLSLPG DSCEVSN+A +         +  IP+  P+QQ P 
Sbjct: 180  GIIPPETTSSSNDPPTSLSLSLPGVDSCEVSNRAPEPNHAPPANPIQMIPTMAPLQQIP- 238

Query: 572  LQQXXXXXXXXXXXXSPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAVEQNGGMCSSQ 393
            + Q            S  EKP +   FSAE LAVMQEMI+KEVRNY + +EQN G+C   
Sbjct: 239  MHQHNQPATVPATVLSQGEKPFI--PFSAELLAVMQEMIRKEVRNYTAGLEQN-GVCLQ- 294

Query: 392  AVDGIRNALVKRIGITKIE 336
              DGIRNA VKRIGI+KIE
Sbjct: 295  -ADGIRNAAVKRIGISKIE 312


>ref|XP_002285015.1| PREDICTED: transcription factor MYB44-like [Vitis vinifera]
          Length = 313

 Score =  328 bits (841), Expect = 2e-87
 Identities = 195/325 (60%), Positives = 219/325 (67%), Gaps = 16/325 (4%)
 Frame = -3

Query: 1262 ITSSRRDLDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 1083
            + SS++DLDRIKGPWSPEED+ L +LV KHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP
Sbjct: 1    MASSKKDLDRIKGPWSPEEDEALQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSP 60

Query: 1082 QVEHRAFSSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASG--EDI 909
            QVEHRAF+ EED TIIRAHA+FGNKWATIARLL GRTDNAIKNHWNSTLKRK S   ED+
Sbjct: 61   QVEHRAFTPEEDATIIRAHARFGNKWATIARLLVGRTDNAIKNHWNSTLKRKCSSITEDM 120

Query: 908  FIDGLTR-PFKRSASVGAVAPYGSGLYLXXXXXXXXXXXXXXXXXXXXGHVYRPVARTGG 732
              DG  + P KRSASVGA     SG  L                      VYRPV RTG 
Sbjct: 121  IADGHAQPPLKRSASVGAGTTV-SGHNLSPSSPSGSEFSDSSAPGMASSLVYRPVPRTGP 179

Query: 731  IL----QIETSSSTNDPPTSLSLSLPGTDSCEVSNQAMKTQSVD------QIPSALPMQQ 582
            I+    +IE +SSTNDPPTSLSLSLPG+DSCEVSN    +  V       Q P+  P+Q 
Sbjct: 180  IVLPTQKIEAASSTNDPPTSLSLSLPGSDSCEVSNHLSGSDHVKIQNQILQSPAIPPVQ- 238

Query: 581  FPLLQQXXXXXXXXXXXXSPI---EKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAVEQNG 411
               LQQ              +   EKP     F+ EFLAVMQEMI+KEVRNYMS +EQNG
Sbjct: 239  ---LQQNPGSPRNIQNCELGLGMSEKPF----FTPEFLAVMQEMIRKEVRNYMSGMEQNG 291

Query: 410  GMCSSQAVDGIRNALVKRIGITKIE 336
                ++A   I NA++KRIGI KIE
Sbjct: 292  LCLQTEA---IWNAVMKRIGIGKIE 313


>ref|NP_001235142.1| MYB transcription factor MYB112 [Glycine max]
            gi|110931706|gb|ABH02852.1| MYB transcription factor
            MYB112 [Glycine max]
          Length = 305

 Score =  327 bits (839), Expect = 4e-87
 Identities = 183/309 (59%), Positives = 206/309 (66%), Gaps = 7/309 (2%)
 Frame = -3

Query: 1241 LDRIKGPWSPEEDDLLTKLVHKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 1062
            +DRIKGPWSPEED+ L KLV KHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF
Sbjct: 1    MDRIKGPWSPEEDEALQKLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAF 60

Query: 1061 SSEEDDTIIRAHAKFGNKWATIARLLNGRTDNAIKNHWNSTLKRKASGEDIFIDGLTRPF 882
            + EEDDTIIRAHA+FGNKWATIARLL+GRTDNAIKNHWNSTLKRK +   I  D  T P 
Sbjct: 61   THEEDDTIIRAHARFGNKWATIARLLHGRTDNAIKNHWNSTLKRKCTSTMIDDDN-TPPL 119

Query: 881  KRSASVGAVAPYGSGLYL---XXXXXXXXXXXXXXXXXXXXGHVYRPVARTGGIL---QI 720
            KRS S GA  P  +GLY+                        HV+RPV RTG +L   + 
Sbjct: 120  KRSLSAGAAIPVSTGLYMNPPTPGSPSGSDVSESSVLVASSSHVFRPVPRTGAVLPPVET 179

Query: 719  ETSSSTNDPPTSLSLSLPGTDSCEVSNQAMKTQSVDQIPSALPMQQFPLLQQXXXXXXXX 540
             T+ S+NDPPTSLSLSLPG DS EVSN+   T+ +   P   P  Q   L          
Sbjct: 180  TTTLSSNDPPTSLSLSLPGVDSSEVSNRT--TEPIHAAPPPPPQPQPQPLNTIPLLPMMT 237

Query: 539  XXXXSPIEKPVVSKAFSAEFLAVMQEMIKKEVRNYMSAVEQNGGMCSSQAV-DGIRNALV 363
                SP      +  FSAEFLAVMQEMI+KEVR+YM    Q  GMC   AV DG RNA V
Sbjct: 238  VPSVSPTGMAPFN--FSAEFLAVMQEMIRKEVRSYMELHNQKNGMCFQAAVNDGFRNASV 295

Query: 362  KRIGITKIE 336
            KRIGI++++
Sbjct: 296  KRIGISRVD 304


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