BLASTX nr result

ID: Coptis21_contig00001532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001532
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25376.3| unnamed protein product [Vitis vinifera]              128   4e-28
ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like ...   127   1e-27
ref|XP_004146441.1| PREDICTED: 40S ribosomal protein S26-1-like ...   127   1e-27
ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like ...   127   1e-27
ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like ...   127   1e-27

>emb|CBI25376.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/84 (76%), Positives = 67/84 (79%)
 Frame = -3

Query: 332 KTLCKMTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE 153
           ++L  MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE
Sbjct: 22  RSLTVMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE 81

Query: 152 ACVNEGYTLPKLYAKMQYCVSCAI 81
           ACV + YTLPKLYAKMQYCVSCAI
Sbjct: 82  ACVYDTYTLPKLYAKMQYCVSCAI 105


>ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -3

Query: 317 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 138
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 137 GYTLPKLYAKMQYCVSCAI 81
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  QYTLPKLYAKMQYCVSCAI 79


>ref|XP_004146441.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -3

Query: 317 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 138
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 137 GYTLPKLYAKMQYCVSCAI 81
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  QYTLPKLYAKMQYCVSCAI 79


>ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
           gi|449514728|ref|XP_004164463.1| PREDICTED: 40S
           ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -3

Query: 317 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 138
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 137 GYTLPKLYAKMQYCVSCAI 81
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  QYTLPKLYAKMQYCVSCAI 79


>ref|XP_002279872.1| PREDICTED: 40S ribosomal protein S26-2-like [Vitis vinifera]
          Length = 124

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/79 (79%), Positives = 64/79 (81%)
 Frame = -3

Query: 317 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVNE 138
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACV +
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 137 GYTLPKLYAKMQYCVSCAI 81
            YTLPKLYAKMQYCVSCAI
Sbjct: 61  TYTLPKLYAKMQYCVSCAI 79


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