BLASTX nr result

ID: Coptis21_contig00001531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001531
         (1411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278391.1| PREDICTED: probable pyridoxal biosynthesis p...   518   e-144
ref|NP_195761.1| Pyridoxal biosynthesis protein PDX1.3 [Arabidop...   510   e-142
sp|Q39963.1|PDX1_HEVBR RecName: Full=Probable pyridoxal biosynth...   509   e-142
gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]      508   e-141
ref|XP_002308219.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141

>ref|XP_002278391.1| PREDICTED: probable pyridoxal biosynthesis protein PDX1-like [Vitis
            vinifera]
          Length = 309

 Score =  518 bits (1334), Expect = e-144
 Identities = 266/309 (86%), Positives = 276/309 (89%)
 Frame = +1

Query: 193  MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 372
            M+GSGVVTVYGNGAITE K S FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
Sbjct: 1    MAGSGVVTVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 373  LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 552
            LERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILE+IGIDY+DES
Sbjct: 61   LERVPADIRAQGGVARMSDPSLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 553  EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 732
            EVLT+ADEDNHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV
Sbjct: 121  EVLTVADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 180

Query: 733  RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXXLM 912
            RSVMG IRVLRNMDDDEVFT+AKK++APYDLVMQTKQLGRLPVV F            LM
Sbjct: 181  RSVMGEIRVLRNMDDDEVFTYAKKLSAPYDLVMQTKQLGRLPVVHFAAGGVATPADAALM 240

Query: 913  MQLGCDXXXXXXXXXXXXDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1092
            MQLGCD            DPA RARAIVQAVTHYSDPD+LAEVSCGLGEAMVG+NLND K
Sbjct: 241  MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDVLAEVSCGLGEAMVGINLNDDK 300

Query: 1093 VERYAMRSE 1119
            VERYA RSE
Sbjct: 301  VERYANRSE 309


>ref|NP_195761.1| Pyridoxal biosynthesis protein PDX1.3 [Arabidopsis thaliana]
            gi|297806077|ref|XP_002870922.1| hypothetical protein
            ARALYDRAFT_908014 [Arabidopsis lyrata subsp. lyrata]
            gi|45477193|sp|Q8L940.2|PDX13_ARATH RecName:
            Full=Pyridoxal biosynthesis protein PDX1.3;
            Short=AtPDX1.3; Short=AtPDX1;1
            gi|16226309|gb|AAL16130.1|AF428298_1 AT5g01410/T10O8_120
            [Arabidopsis thaliana]
            gi|17933287|gb|AAL48227.1|AF446352_1 AT5g01410/T10O8_120
            [Arabidopsis thaliana] gi|7320719|emb|CAB81924.1|
            pyridoxine biosynthesis protein-like [Arabidopsis
            thaliana] gi|20453411|gb|AAM19944.1| AT5g01410/T10O8_120
            [Arabidopsis thaliana] gi|65329268|gb|AAY42123.1|
            pyridoxine biosynthesis protein [Arabidopsis thaliana]
            gi|110742648|dbj|BAE99236.1| pyridoxine biosynthesis
            protein - like [Arabidopsis thaliana]
            gi|297316759|gb|EFH47181.1| hypothetical protein
            ARALYDRAFT_908014 [Arabidopsis lyrata subsp. lyrata]
            gi|332002957|gb|AED90340.1| Pyridoxal biosynthesis
            protein PDX1.3 [Arabidopsis thaliana]
            gi|333108791|gb|AEF15886.1| pyridoxine biosynthesis
            protein [Arabidopsis thaliana]
          Length = 309

 Score =  510 bits (1314), Expect = e-142
 Identities = 263/309 (85%), Positives = 275/309 (88%)
 Frame = +1

Query: 193  MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 372
            M G+GVV VYGNGAITEAK S FSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA
Sbjct: 1    MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 60

Query: 373  LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 552
            LERVPADIRAQGGVARMSDP +IKEIKQAVTIPVMAKARIGHFVEAQILE+IGIDYIDES
Sbjct: 61   LERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDES 120

Query: 553  EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 732
            EVLTLADED+HINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNI+EAVRHV
Sbjct: 121  EVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIIEAVRHV 180

Query: 733  RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXXLM 912
            RSV G IRVLRNMDDDEVFTFAKK+AAPYDLVMQTKQLGRLPVVQF            LM
Sbjct: 181  RSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 913  MQLGCDXXXXXXXXXXXXDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1092
            MQLGCD            DPA RARAIVQAVTHYSDP++L EVSCGLGEAMVG+NLND+K
Sbjct: 241  MQLGCDGVFVGSGIFKSGDPARRARAIVQAVTHYSDPEMLVEVSCGLGEAMVGINLNDEK 300

Query: 1093 VERYAMRSE 1119
            VER+A RSE
Sbjct: 301  VERFANRSE 309


>sp|Q39963.1|PDX1_HEVBR RecName: Full=Probable pyridoxal biosynthesis protein PDX1; AltName:
            Full=Ethylene-inducible protein HEVER
            gi|1209317|gb|AAA91063.1| ethylene-inducible protein
            [Hevea brasiliensis]
          Length = 309

 Score =  509 bits (1310), Expect = e-142
 Identities = 261/309 (84%), Positives = 275/309 (88%)
 Frame = +1

Query: 193  MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 372
            M+G+GVV VYGNGAITE K S FSVKVGLAQMLRGGVIMDVVN EQARIAEEAGACAVMA
Sbjct: 1    MAGTGVVAVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMA 60

Query: 373  LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 552
            LERVPADIRAQGGVARMSDP LIKEIKQ+VTIPVMAKARIGHFVEAQILE+IGIDY+DES
Sbjct: 61   LERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDES 120

Query: 553  EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 732
            EVLT ADE+NHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRHV
Sbjct: 121  EVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHV 180

Query: 733  RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXXLM 912
            RSVMG IR+LRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQF            LM
Sbjct: 181  RSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 913  MQLGCDXXXXXXXXXXXXDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1092
            MQLGCD            DPA RARAIVQAVTHYSDPD+LAEVSCGLGEAMVG+NLND+K
Sbjct: 241  MQLGCDGVFVGSGVFKSGDPARRARAIVQAVTHYSDPDMLAEVSCGLGEAMVGINLNDKK 300

Query: 1093 VERYAMRSE 1119
            VER+A RSE
Sbjct: 301  VERFANRSE 309


>gb|AAZ67141.1| pyridoxine biosynthesis protein [Lotus japonicus]
          Length = 310

 Score =  508 bits (1308), Expect = e-141
 Identities = 264/310 (85%), Positives = 273/310 (88%), Gaps = 1/310 (0%)
 Frame = +1

Query: 193  MSGSGVVTVYGNGA-ITEAKNSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVM 369
            M GSGVVTVYGNGA ITE K S FSVKVGLAQMLRGGVIMDVVNA+QARIAEEAGACAVM
Sbjct: 1    MEGSGVVTVYGNGAAITETKKSPFSVKVGLAQMLRGGVIMDVVNAQQARIAEEAGACAVM 60

Query: 370  ALERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDE 549
            ALERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILE+IG+DY+DE
Sbjct: 61   ALERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDE 120

Query: 550  SEVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRH 729
            SEVLTLADEDNHINKHNFR+PFVCGCRNLGEALRR+REGAAMIRTKGEAGTGNIVEAVRH
Sbjct: 121  SEVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRVREGAAMIRTKGEAGTGNIVEAVRH 180

Query: 730  VRSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXXL 909
            VRSVMG IRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVV F            L
Sbjct: 181  VRSVMGDIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVHFAAGGVATPADAAL 240

Query: 910  MMQLGCDXXXXXXXXXXXXDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQ 1089
            MMQLGCD            DPA RARAIVQAVTHYSDP +LAE+SCGLGEAMVGLNLND 
Sbjct: 241  MMQLGCDGVFVGSGVFKSGDPAKRARAIVQAVTHYSDPGLLAEISCGLGEAMVGLNLNDS 300

Query: 1090 KVERYAMRSE 1119
             VER+A RSE
Sbjct: 301  NVERFANRSE 310


>ref|XP_002308219.1| predicted protein [Populus trichocarpa] gi|222854195|gb|EEE91742.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  508 bits (1307), Expect = e-141
 Identities = 259/309 (83%), Positives = 273/309 (88%)
 Frame = +1

Query: 193  MSGSGVVTVYGNGAITEAKNSTFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMA 372
            M+G+GVV VYGNG ITE K S FSVKVGLAQMLRGGVIMDVV AEQARIAEEAGACAVMA
Sbjct: 1    MAGTGVVAVYGNGTITETKKSPFSVKVGLAQMLRGGVIMDVVTAEQARIAEEAGACAVMA 60

Query: 373  LERVPADIRAQGGVARMSDPGLIKEIKQAVTIPVMAKARIGHFVEAQILESIGIDYIDES 552
            LERVPADIRAQGGVARMSDP LIKEIKQAVTIPVMAKARIGHFVEAQILE+IG+DY+DES
Sbjct: 61   LERVPADIRAQGGVARMSDPQLIKEIKQAVTIPVMAKARIGHFVEAQILEAIGVDYVDES 120

Query: 553  EVLTLADEDNHINKHNFRVPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNIVEAVRHV 732
            EVLTLADEDNHINKHNFR+PFVCGCRNLGEALRRIREGAAMIRTKGEAGTGN++EAVRHV
Sbjct: 121  EVLTLADEDNHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGEAGTGNVIEAVRHV 180

Query: 733  RSVMGAIRVLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFXXXXXXXXXXXXLM 912
            RSVMG IR+LRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQF            LM
Sbjct: 181  RSVMGDIRMLRNMDDDEVFTFAKKIAAPYDLVMQTKQLGRLPVVQFAAGGVATPADAALM 240

Query: 913  MQLGCDXXXXXXXXXXXXDPAARARAIVQAVTHYSDPDILAEVSCGLGEAMVGLNLNDQK 1092
            MQLGCD            DP  R RAIVQAVTHYSDP++LAEVSCGLGEAMVGLNLND+K
Sbjct: 241  MQLGCDGVFVGSGVFKSGDPVKRGRAIVQAVTHYSDPELLAEVSCGLGEAMVGLNLNDKK 300

Query: 1093 VERYAMRSE 1119
            VER+A RS+
Sbjct: 301  VERFASRSD 309


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