BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001522
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26002.3| unnamed protein product [Vitis vinifera]              193   1e-47
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   193   1e-47
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...   191   5e-47
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46

>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/107 (86%), Positives = 98/107 (91%)
 Frame = -1

Query: 323 CQPDVFRYSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQME 144
           CQPDVF YSTL+K CVD  RFELV+SLYEEM  R ITPNTVTQNIVL+GYGKAGKFD+ME
Sbjct: 211 CQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEME 270

Query: 143 KVLSGMLESTECKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRSFGI 3
           KVLSGMLEST  KPDVWTMNTILSLFGNKGQIEIMEKWYEKFR+FGI
Sbjct: 271 KVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGI 317


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/107 (86%), Positives = 98/107 (91%)
 Frame = -1

Query: 323 CQPDVFRYSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQME 144
           CQPDVF YSTL+K CVD  RFELV+SLYEEM  R ITPNTVTQNIVL+GYGKAGKFD+ME
Sbjct: 211 CQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEME 270

Query: 143 KVLSGMLESTECKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRSFGI 3
           KVLSGMLEST  KPDVWTMNTILSLFGNKGQIEIMEKWYEKFR+FGI
Sbjct: 271 KVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGI 317


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  193 bits (491), Expect = 1e-47
 Identities = 93/107 (86%), Positives = 98/107 (91%)
 Frame = -1

Query: 323 CQPDVFRYSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQME 144
           CQPDVF YSTL+K CVD  RFELV+SLYEEM  R ITPNTVTQNIVL+GYGKAGKFD+ME
Sbjct: 211 CQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEME 270

Query: 143 KVLSGMLESTECKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRSFGI 3
           KVLSGMLEST  KPDVWTMNTILSLFGNKGQIEIMEKWYEKFR+FGI
Sbjct: 271 KVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFGI 317


>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  191 bits (485), Expect = 5e-47
 Identities = 88/107 (82%), Positives = 99/107 (92%)
 Frame = -1

Query: 323 CQPDVFRYSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQME 144
           C PDV+ YSTL+K CVD  RFELV++LY+EM ERLITPNTVTQNIVL+GYGKAG +DQME
Sbjct: 197 CLPDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQME 256

Query: 143 KVLSGMLESTECKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRSFGI 3
           +VLSGMLESTECKPDVWTMN ILS+FGNKGQI++MEKWYEKFRSFGI
Sbjct: 257 RVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFGI 303


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  189 bits (479), Expect = 3e-46
 Identities = 87/107 (81%), Positives = 98/107 (91%)
 Frame = -1

Query: 323 CQPDVFRYSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQME 144
           CQPDV+ YS LIK CVD+ RFE+V+SLYEEMAERLITPNTVTQNIVL+GYGK GK+DQME
Sbjct: 209 CQPDVYTYSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQME 268

Query: 143 KVLSGMLESTECKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRSFGI 3
           KVL GMLEST C+PDVWTMN ILS+FGNKG IE+ME+WYEKFR+FGI
Sbjct: 269 KVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFRNFGI 315