BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001521
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26002.3| unnamed protein product [Vitis vinifera]              283   1e-74
ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containi...   283   1e-74
emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]   283   1e-74
ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containi...   281   5e-74
ref|XP_002519315.1| pentatricopeptide repeat-containing protein,...   280   1e-73

>emb|CBI26002.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score =  283 bits (724), Expect = 1e-74
 Identities = 136/174 (78%), Positives = 153/174 (87%)
 Frame = +3

Query: 54  LDAKENAKAWVNTVTEALSDRILKKQWQDALQVFEMLKEQPFYSPKEGTYMKLLVLLGKC 233
           LD K +AKAW NTV EALSD +LKKQW  AL+VFEML+EQPFY PKEGTYMKLLVLLGK 
Sbjct: 98  LDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKS 157

Query: 234 RQPYRARKLFDQMLEECCEPTSELYTALLASYCRNNLVDEAFAVLKEMKTLPQCQPDVFT 413
            QP RA +LFD M+EE CEPT+ELYTALLASYCR+NL+DEAF++L +MKTLP+CQPDVFT
Sbjct: 158 GQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFT 217

Query: 414 YSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQMEK 575
           YSTL+K CVD  RFELV+SLYEEM  R ITPNTVTQNIVL+GYGKAGKFD+MEK
Sbjct: 218 YSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEK 271



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 37/144 (25%), Positives = 65/144 (45%)
 Frame = +3

Query: 138 DALQVFEMLKEQPFYSPKEGTYMKLLVLLGKCRQPYRARKLFDQMLEECCEPTSELYTAL 317
           +A  +   +K  P   P   TY  LL       +      L+++M      P +     +
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256

Query: 318 LASYCRNNLVDEAFAVLKEMKTLPQCQPDVFTYSTLIKVCVDECRFELVDSLYEEMAERL 497
           L+ Y +    DE   VL  M      +PDV+T +T++ +  ++ + E+++  YE+     
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316

Query: 498 ITPNTVTQNIVLNGYGKAGKFDQM 569
           I P T T NI++  YGK   +D+M
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKM 340


>ref|XP_002274904.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic [Vitis vinifera]
          Length = 498

 Score =  283 bits (724), Expect = 1e-74
 Identities = 136/174 (78%), Positives = 153/174 (87%)
 Frame = +3

Query: 54  LDAKENAKAWVNTVTEALSDRILKKQWQDALQVFEMLKEQPFYSPKEGTYMKLLVLLGKC 233
           LD K +AKAW NTV EALSD +LKKQW  AL+VFEML+EQPFY PKEGTYMKLLVLLGK 
Sbjct: 98  LDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKS 157

Query: 234 RQPYRARKLFDQMLEECCEPTSELYTALLASYCRNNLVDEAFAVLKEMKTLPQCQPDVFT 413
            QP RA +LFD M+EE CEPT+ELYTALLASYCR+NL+DEAF++L +MKTLP+CQPDVFT
Sbjct: 158 GQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFT 217

Query: 414 YSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQMEK 575
           YSTL+K CVD  RFELV+SLYEEM  R ITPNTVTQNIVL+GYGKAGKFD+MEK
Sbjct: 218 YSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEK 271



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 37/144 (25%), Positives = 65/144 (45%)
 Frame = +3

Query: 138 DALQVFEMLKEQPFYSPKEGTYMKLLVLLGKCRQPYRARKLFDQMLEECCEPTSELYTAL 317
           +A  +   +K  P   P   TY  LL       +      L+++M      P +     +
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256

Query: 318 LASYCRNNLVDEAFAVLKEMKTLPQCQPDVFTYSTLIKVCVDECRFELVDSLYEEMAERL 497
           L+ Y +    DE   VL  M      +PDV+T +T++ +  ++ + E+++  YE+     
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316

Query: 498 ITPNTVTQNIVLNGYGKAGKFDQM 569
           I P T T NI++  YGK   +D+M
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKM 340


>emb|CAN74604.1| hypothetical protein VITISV_025315 [Vitis vinifera]
          Length = 525

 Score =  283 bits (724), Expect = 1e-74
 Identities = 136/174 (78%), Positives = 153/174 (87%)
 Frame = +3

Query: 54  LDAKENAKAWVNTVTEALSDRILKKQWQDALQVFEMLKEQPFYSPKEGTYMKLLVLLGKC 233
           LD K +AKAW NTV EALSD +LKKQW  AL+VFEML+EQPFY PKEGTYMKLLVLLGK 
Sbjct: 98  LDRKNDAKAWANTVAEALSDLVLKKQWLQALEVFEMLREQPFYQPKEGTYMKLLVLLGKS 157

Query: 234 RQPYRARKLFDQMLEECCEPTSELYTALLASYCRNNLVDEAFAVLKEMKTLPQCQPDVFT 413
            QP RA +LFD M+EE CEPT+ELYTALLASYCR+NL+DEAF++L +MKTLP+CQPDVFT
Sbjct: 158 GQPLRAHELFDTMVEEGCEPTTELYTALLASYCRSNLIDEAFSILNQMKTLPRCQPDVFT 217

Query: 414 YSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQMEK 575
           YSTL+K CVD  RFELV+SLYEEM  R ITPNTVTQNIVL+GYGKAGKFD+MEK
Sbjct: 218 YSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIVLSGYGKAGKFDEMEK 271



 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 37/144 (25%), Positives = 65/144 (45%)
 Frame = +3

Query: 138 DALQVFEMLKEQPFYSPKEGTYMKLLVLLGKCRQPYRARKLFDQMLEECCEPTSELYTAL 317
           +A  +   +K  P   P   TY  LL       +      L+++M      P +     +
Sbjct: 197 EAFSILNQMKTLPRCQPDVFTYSTLLKACVDASRFELVESLYEEMDVRSITPNTVTQNIV 256

Query: 318 LASYCRNNLVDEAFAVLKEMKTLPQCQPDVFTYSTLIKVCVDECRFELVDSLYEEMAERL 497
           L+ Y +    DE   VL  M      +PDV+T +T++ +  ++ + E+++  YE+     
Sbjct: 257 LSGYGKAGKFDEMEKVLSGMLESTSSKPDVWTMNTILSLFGNKGQIEIMEKWYEKFRNFG 316

Query: 498 ITPNTVTQNIVLNGYGKAGKFDQM 569
           I P T T NI++  YGK   +D+M
Sbjct: 317 IEPETRTFNILIGAYGKKRMYDKM 340


>ref|XP_004138596.1| PREDICTED: pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
           gi|449522692|ref|XP_004168360.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g06430,
           chloroplastic-like [Cucumis sativus]
          Length = 496

 Score =  281 bits (719), Expect = 5e-74
 Identities = 134/174 (77%), Positives = 152/174 (87%)
 Frame = +3

Query: 54  LDAKENAKAWVNTVTEALSDRILKKQWQDALQVFEMLKEQPFYSPKEGTYMKLLVLLGKC 233
           LD K NAKAW NTVTEALSD I  K+W  AL+VFEML+EQPFY PKEGTYMKLLVLLG+ 
Sbjct: 96  LDRKNNAKAWANTVTEALSDHITNKRWLQALEVFEMLREQPFYEPKEGTYMKLLVLLGRS 155

Query: 234 RQPYRARKLFDQMLEECCEPTSELYTALLASYCRNNLVDEAFAVLKEMKTLPQCQPDVFT 413
            QP+RAR LFD M++E CEPT ELYTALLA+YCRNNL+D+AF+ L  MKTLP+CQPDV+T
Sbjct: 156 GQPHRARLLFDTMVQERCEPTPELYTALLAAYCRNNLIDDAFSTLNLMKTLPRCQPDVYT 215

Query: 414 YSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQMEK 575
           YS LIK CVD+ RFE+V+SLYEEMAERLITPNTVTQNIVL+GYGK GK+DQMEK
Sbjct: 216 YSILIKACVDDSRFEIVESLYEEMAERLITPNTVTQNIVLSGYGKIGKYDQMEK 269



 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 3/147 (2%)
 Frame = +3

Query: 138 DALQVFEMLKEQPFYSPKEGTYMKLLVLLGKCRQPYR---ARKLFDQMLEECCEPTSELY 308
           DA     ++K  P   P   TY    +L+  C    R      L+++M E    P +   
Sbjct: 195 DAFSTLNLMKTLPRCQPDVYTYS---ILIKACVDDSRFEIVESLYEEMAERLITPNTVTQ 251

Query: 309 TALLASYCRNNLVDEAFAVLKEMKTLPQCQPDVFTYSTLIKVCVDECRFELVDSLYEEMA 488
             +L+ Y +    D+   VL  M     C+PDV+T + ++ V  ++   E+++  YE+  
Sbjct: 252 NIVLSGYGKIGKYDQMEKVLIGMLESTTCRPDVWTMNIILSVFGNKGHIEMMERWYEKFR 311

Query: 489 ERLITPNTVTQNIVLNGYGKAGKFDQM 569
              I P T T NI++  YGK   +D+M
Sbjct: 312 NFGIEPETRTFNILIGAYGKKRMYDKM 338


>ref|XP_002519315.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541630|gb|EEF43179.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 491

 Score =  280 bits (716), Expect = 1e-73
 Identities = 134/174 (77%), Positives = 155/174 (89%)
 Frame = +3

Query: 54  LDAKENAKAWVNTVTEALSDRILKKQWQDALQVFEMLKEQPFYSPKEGTYMKLLVLLGKC 233
           LD K  AKAWVNTVTEALSDRILKKQW  AL+VFEMLKEQPFY PKEGTYMKLLVLLG+ 
Sbjct: 84  LDRKNKAKAWVNTVTEALSDRILKKQWFQALEVFEMLKEQPFYHPKEGTYMKLLVLLGRT 143

Query: 234 RQPYRARKLFDQMLEECCEPTSELYTALLASYCRNNLVDEAFAVLKEMKTLPQCQPDVFT 413
            QP RA +LFD+M+EE  EPT+ELYTALLA+YCRN+L DEAF++L++MKTLP+C PDV+T
Sbjct: 144 GQPQRAHQLFDEMVEEGIEPTAELYTALLAAYCRNHLTDEAFSILQQMKTLPRCLPDVYT 203

Query: 414 YSTLIKVCVDECRFELVDSLYEEMAERLITPNTVTQNIVLNGYGKAGKFDQMEK 575
           YSTL+K CVD  RFELV++LY+EM ERLITPNTVTQNIVL+GYGKAG +DQME+
Sbjct: 204 YSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIVLSGYGKAGMYDQMER 257



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 38/144 (26%), Positives = 68/144 (47%)
 Frame = +3

Query: 138 DALQVFEMLKEQPFYSPKEGTYMKLLVLLGKCRQPYRARKLFDQMLEECCEPTSELYTAL 317
           +A  + + +K  P   P   TY  LL       +      L+ +M E    P +     +
Sbjct: 183 EAFSILQQMKTLPRCLPDVYTYSTLLKACVDASRFELVEALYQEMGERLITPNTVTQNIV 242

Query: 318 LASYCRNNLVDEAFAVLKEMKTLPQCQPDVFTYSTLIKVCVDECRFELVDSLYEEMAERL 497
           L+ Y +  + D+   VL  M    +C+PDV+T + ++ V  ++ + +L++  YE+     
Sbjct: 243 LSGYGKAGMYDQMERVLSGMLESTECKPDVWTMNIILSVFGNKGQIDLMEKWYEKFRSFG 302

Query: 498 ITPNTVTQNIVLNGYGKAGKFDQM 569
           I P T T NI++  YGK   +D+M
Sbjct: 303 IEPETRTFNILIGAYGKKRMYDKM 326