BLASTX nr result

ID: Coptis21_contig00001519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001519
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631259.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   319   1e-84
ref|XP_002525376.1| amsh, putative [Ricinus communis] gi|2235353...   312   1e-82
ref|XP_002315693.1| predicted protein [Populus trichocarpa] gi|2...   310   7e-82
ref|XP_002889820.1| hypothetical protein ARALYDRAFT_888336 [Arab...   290   5e-76
ref|XP_003517724.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   290   7e-76

>ref|XP_003631259.1| PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Vitis vinifera]
            gi|297739036|emb|CBI28525.3| unnamed protein product
            [Vitis vinifera]
          Length = 275

 Score =  319 bits (817), Expect = 1e-84
 Identities = 154/229 (67%), Positives = 180/229 (78%), Gaps = 8/229 (3%)
 Frame = +2

Query: 389  LNVQCVTQSSPSPAVTCIQSPPQAAHLSHIAASDSRHDYSQS--------SCHDVHISVR 544
            + V  VT++SPSP + C ++     H+SHI  SDS   +S+S           DVHIS R
Sbjct: 47   ITVHAVTKASPSPIIYCTENAHHDKHISHIEVSDSEPGHSKSCSETAVSKKLQDVHISAR 106

Query: 545  LMDDFLELARDNTNKDLETCGVLGAFLKNGVFYVTALIIPKQEATSSSCQALNEEEIHAI 724
            LM+DFLELARDNT  DLETCG+LGAFLK G FYVT LIIPKQE+TS+SCQA+ EEEI AI
Sbjct: 107  LMEDFLELARDNTKNDLETCGILGAFLKMGTFYVTTLIIPKQESTSNSCQAIKEEEIFAI 166

Query: 725  QYENSLFPLGWIHTHPSQTCFMSSIDLHTQYCYQVMLPEAVAIVMAPTDSTRSYGIFRLS 904
            Q E+SLFP+GWIHTHPSQ+CFMSSIDLHTQY YQVM+PEA AIVMAPTD++RSYGIFRLS
Sbjct: 167  QNEHSLFPVGWIHTHPSQSCFMSSIDLHTQYSYQVMVPEAFAIVMAPTDTSRSYGIFRLS 226

Query: 905  DPGGTTVLKECQERGFHTHQEPSDGSPIYEDSTNVYVNPNLRLEIFDLR 1051
            DP G +VLK+C E GFH H EP+DG PIYE  +N+Y+N NLR EIFDLR
Sbjct: 227  DPVGMSVLKDCPEEGFHHHNEPADGGPIYEHCSNIYINSNLRFEIFDLR 275


>ref|XP_002525376.1| amsh, putative [Ricinus communis] gi|223535339|gb|EEF37014.1| amsh,
            putative [Ricinus communis]
          Length = 265

 Score =  312 bits (799), Expect = 1e-82
 Identities = 152/226 (67%), Positives = 178/226 (78%), Gaps = 5/226 (2%)
 Frame = +2

Query: 389  LNVQCVTQSSPSPAVTCIQSPPQAAHLSHIAASDSRHD-----YSQSSCHDVHISVRLMD 553
            + V  VTQSSPSP ++C++  P+ AH+S I A+ S  +      S +   D+HIS RLM+
Sbjct: 40   ITVHTVTQSSPSPILSCVEKAPKHAHISPIPAAGSNTNPCNQPSSSNILQDIHISERLME 99

Query: 554  DFLELARDNTNKDLETCGVLGAFLKNGVFYVTALIIPKQEATSSSCQALNEEEIHAIQYE 733
            DFLELAR+NT KDLETCGVL AFL+ G +YVT LIIPKQ +TSSSC+A+ EEE  AIQ E
Sbjct: 100  DFLELARENTEKDLETCGVLSAFLEMGTYYVTTLIIPKQNSTSSSCEAIKEEEFFAIQNE 159

Query: 734  NSLFPLGWIHTHPSQTCFMSSIDLHTQYCYQVMLPEAVAIVMAPTDSTRSYGIFRLSDPG 913
             SL P+GWIHTHPSQ+CFMSSIDLHTQY YQVM+PEA AIVMAPTD++RSYG+FRLSDPG
Sbjct: 160  RSLHPVGWIHTHPSQSCFMSSIDLHTQYSYQVMVPEAFAIVMAPTDTSRSYGLFRLSDPG 219

Query: 914  GTTVLKECQERGFHTHQEPSDGSPIYEDSTNVYVNPNLRLEIFDLR 1051
            G  VLKECQE GFH H EP+DG PIYE  +NVY N NLR EIFDLR
Sbjct: 220  GMGVLKECQETGFHPHGEPADGGPIYEHCSNVYANSNLRFEIFDLR 265


>ref|XP_002315693.1| predicted protein [Populus trichocarpa] gi|222864733|gb|EEF01864.1|
            predicted protein [Populus trichocarpa]
          Length = 221

 Score =  310 bits (793), Expect = 7e-82
 Identities = 152/225 (67%), Positives = 178/225 (79%), Gaps = 9/225 (4%)
 Frame = +2

Query: 404  VTQSSPSPAVTCIQSPPQAAHLSHIAASDSRHDYSQSSCH---------DVHISVRLMDD 556
            VTQ+SP P ++C++  P+ AH+S I  +DS     QSSC+         DVHIS  LM+D
Sbjct: 1    VTQTSPCPILSCVEKAPKYAHVSLIPVADS----DQSSCNQPSASGVLQDVHISPLLMED 56

Query: 557  FLELARDNTNKDLETCGVLGAFLKNGVFYVTALIIPKQEATSSSCQALNEEEIHAIQYEN 736
            FLELAR+NT KDLETCGVLGAFL++G +YVT LIIPKQ++TSSSC+AL EEE  AIQ E 
Sbjct: 57   FLELARENTEKDLETCGVLGAFLEHGTYYVTTLIIPKQDSTSSSCEALKEEEFFAIQNER 116

Query: 737  SLFPLGWIHTHPSQTCFMSSIDLHTQYCYQVMLPEAVAIVMAPTDSTRSYGIFRLSDPGG 916
            SLFP+GWIHTHPSQ+CFMSSIDLHT + YQ M+PEA AIVMAPTD +RSYGIFRLSDPGG
Sbjct: 117  SLFPVGWIHTHPSQSCFMSSIDLHTHFSYQAMVPEAFAIVMAPTDQSRSYGIFRLSDPGG 176

Query: 917  TTVLKECQERGFHTHQEPSDGSPIYEDSTNVYVNPNLRLEIFDLR 1051
             +VLKEC+E GFH H EP+DGSPIYE   NV+ N NLR EIFDLR
Sbjct: 177  MSVLKECEESGFHPHGEPADGSPIYEHCANVFTNTNLRFEIFDLR 221


>ref|XP_002889820.1| hypothetical protein ARALYDRAFT_888336 [Arabidopsis lyrata subsp.
            lyrata] gi|297335662|gb|EFH66079.1| hypothetical protein
            ARALYDRAFT_888336 [Arabidopsis lyrata subsp. lyrata]
          Length = 223

 Score =  290 bits (742), Expect = 5e-76
 Identities = 138/222 (62%), Positives = 178/222 (80%), Gaps = 6/222 (2%)
 Frame = +2

Query: 404  VTQSSPSPAVTCIQSPP-QAAHLSHIAASDS-RHDYSQSS----CHDVHISVRLMDDFLE 565
            VT SSPSP+++C+++   +++H+S +  S + ++++ +SS      DVHIS RL++DF E
Sbjct: 2    VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDKNNHGESSEPKILRDVHISERLLEDFTE 61

Query: 566  LARDNTNKDLETCGVLGAFLKNGVFYVTALIIPKQEATSSSCQALNEEEIHAIQYENSLF 745
            LAR+NT KDLETCG L AFL+ G+FYVT LIIPKQE+TS+SCQA+NE E+ +IQ E  L+
Sbjct: 62   LARENTEKDLETCGTLAAFLERGIFYVTTLIIPKQESTSNSCQAMNEVEVFSIQNERELY 121

Query: 746  PLGWIHTHPSQTCFMSSIDLHTQYCYQVMLPEAVAIVMAPTDSTRSYGIFRLSDPGGTTV 925
            P+GWIHTHPSQ CFMSS+DLHT Y YQVM+PEA AIV+APTDS++SYGIF+L+DPGG  V
Sbjct: 122  PVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSYGIFKLTDPGGMEV 181

Query: 926  LKECQERGFHTHQEPSDGSPIYEDSTNVYVNPNLRLEIFDLR 1051
            LK C E GFH H+EP DG+P+YE  +NVY N NLR EIFDLR
Sbjct: 182  LKGCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 223


>ref|XP_003517724.1| PREDICTED: AMSH-like ubiquitin thiolesterase 2-like [Glycine max]
          Length = 291

 Score =  290 bits (741), Expect = 7e-76
 Identities = 138/220 (62%), Positives = 173/220 (78%), Gaps = 1/220 (0%)
 Frame = +2

Query: 395  VQCVTQSSPSPAVTCIQSPPQAAHLSHIAASDSRHDYSQSSCH-DVHISVRLMDDFLELA 571
            +Q VTQS PSPA+  +++ PQ A  SH+ A +S    S+S    DVHIS+RLM+DFL+LA
Sbjct: 70   LQKVTQSWPSPALCFVETVPQDAQSSHVTAFNSGDGSSKSDNERDVHISMRLMEDFLDLA 129

Query: 572  RDNTNKDLETCGVLGAFLKNGVFYVTALIIPKQEATSSSCQALNEEEIHAIQYENSLFPL 751
            ++NT KDLETCG+LGA+L+ G  Y+T LIIPKQE+ S+SCQA NEEE+  I  E SL+P+
Sbjct: 130  KENTEKDLETCGILGAYLEKGTLYLTTLIIPKQESASNSCQATNEEEVFKILNERSLYPV 189

Query: 752  GWIHTHPSQTCFMSSIDLHTQYCYQVMLPEAVAIVMAPTDSTRSYGIFRLSDPGGTTVLK 931
            GWIHTHPSQ+CFMSS+DLHTQY YQVM+PEA AIV+AP D++RS G+FRL+ P G  +LK
Sbjct: 190  GWIHTHPSQSCFMSSVDLHTQYSYQVMIPEAFAIVLAPNDTSRSCGLFRLTKPEGMNILK 249

Query: 932  ECQERGFHTHQEPSDGSPIYEDSTNVYVNPNLRLEIFDLR 1051
             CQE GFH H+EP +GSP+YE  +NVY N NLR EIFDLR
Sbjct: 250  NCQETGFHPHKEPDNGSPVYEHCSNVYKNSNLRFEIFDLR 289


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