BLASTX nr result

ID: Coptis21_contig00001511 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001511
         (1685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284953.1| PREDICTED: probable N-acetyl-gamma-glutamyl-...   632   e-178
ref|XP_004145353.1| PREDICTED: probable N-acetyl-gamma-glutamyl-...   585   e-164
gb|ABK24282.1| unknown [Picea sitchensis]                             583   e-164
emb|CAN73785.1| hypothetical protein VITISV_023769 [Vitis vinifera]   580   e-163
ref|XP_002330272.1| predicted protein [Populus trichocarpa] gi|2...   576   e-162

>ref|XP_002284953.1| PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic [Vitis vinifera]
            gi|297741338|emb|CBI32469.3| unnamed protein product
            [Vitis vinifera]
          Length = 398

 Score =  632 bits (1629), Expect = e-178
 Identities = 312/403 (77%), Positives = 351/403 (87%), Gaps = 8/403 (1%)
 Frame = -2

Query: 1546 MKFTGLGSVYLEQRCFFKNEVRLFKDRNASGCSLFVRGASGKLEMKVE--------SDKV 1391
            M    L S+  ++  F K+E +     +++G  L +RG+       V+        S K 
Sbjct: 1    MSSAHLSSIRFDREWFRKSETK-----SSNGRKLHIRGSVTSSPQSVQFAEAKAEKSGKA 55

Query: 1390 VRIGVLGASGYTGSEIVRLLANHPQFGISVMTADRKAGQSIGSVFPHLIRQNLPDMVAIK 1211
            VRIGVLGASGYTGSEIVRLLANHP FGI++MTADRKAGQSIGSVFPHLI Q+LPDMVAIK
Sbjct: 56   VRIGVLGASGYTGSEIVRLLANHPHFGITLMTADRKAGQSIGSVFPHLITQDLPDMVAIK 115

Query: 1210 DADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPHRAPDL 1031
            DA FSNVDAVFCCLPHGTTQ+IIKALPK LKIVDLSADFRL+ + EYEEWYGQPHRAPDL
Sbjct: 116  DAKFSNVDAVFCCLPHGTTQDIIKALPKSLKIVDLSADFRLQEIAEYEEWYGQPHRAPDL 175

Query: 1030 QKEAIYGLTEVLRDEIRIARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAKSGVSG 851
            QKEA+YGLTE+LR+EI+ ARLVANPGCYPT+IQ+PLVPL+KANLI+ RN+IIDAKSGVSG
Sbjct: 176  QKEAVYGLTEILREEIKAARLVANPGCYPTTIQLPLVPLLKANLIETRNLIIDAKSGVSG 235

Query: 850  AGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPMSRGMQ 671
            AGRGAKEANLYTEIAEGIHSYGIT+HRHVPEIEQGLSD AH+KVTVSFTPHLMPMSRGMQ
Sbjct: 236  AGRGAKEANLYTEIAEGIHSYGITRHRHVPEIEQGLSDAAHAKVTVSFTPHLMPMSRGMQ 295

Query: 670  STIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVFPDRIP 491
            STIYVEM PG T EDLY++L+ +YEDEEFV+LL+KG  PHTRNVRGSNYC +NVFPDRIP
Sbjct: 296  STIYVEMTPGVTIEDLYKQLKIAYEDEEFVILLEKGVVPHTRNVRGSNYCLLNVFPDRIP 355

Query: 490  GRAIIISVIDNLVKGASGQAIQNLNLMMGIPENTGLLYQPLFP 362
            GRAII+SVIDNLVKGASGQA+QNLN+MMG+PENTGLLYQPLFP
Sbjct: 356  GRAIIVSVIDNLVKGASGQALQNLNVMMGLPENTGLLYQPLFP 398


>ref|XP_004145353.1| PREDICTED: probable N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic-like [Cucumis sativus]
            gi|449473256|ref|XP_004153831.1| PREDICTED: probable
            N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic-like [Cucumis sativus]
            gi|449502406|ref|XP_004161631.1| PREDICTED: probable
            N-acetyl-gamma-glutamyl-phosphate reductase,
            chloroplastic-like [Cucumis sativus]
          Length = 389

 Score =  585 bits (1507), Expect = e-164
 Identities = 294/391 (75%), Positives = 329/391 (84%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1525 SVYLEQRCFFKNEVRLFKDRNASGCSLFVRGASGKLEMKVESDKV---VRIGVLGASGYT 1355
            S +    C  K+E ++ K R  S  ++F      K  M V+S      VRIGVLGASGYT
Sbjct: 4    STFSSLSCLLKDESQILKLRKRSVGNVFF-----KCSMSVKSQNPQPEVRIGVLGASGYT 58

Query: 1354 GSEIVRLLANHPQFGISVMTADRKAGQSIGSVFPHLIRQNLPDMVAIKDADFSNVDAVFC 1175
            GSEIVRLLANHP FGI++MTADRKAGQ   SVFPHL  Q+LP++V IKDADFS VDA+FC
Sbjct: 59   GSEIVRLLANHPHFGITLMTADRKAGQPFSSVFPHLFTQDLPELVTIKDADFSKVDAIFC 118

Query: 1174 CLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPHRAPDLQKEAIYGLTEVL 995
            CLPHGTTQE+IKALPK LKIVDLSADFRL+   EYEEWYGQPHRA DLQKEA+YGLTE+L
Sbjct: 119  CLPHGTTQEVIKALPKELKIVDLSADFRLQDPFEYEEWYGQPHRAVDLQKEAVYGLTEIL 178

Query: 994  RDEIRIARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAKSGVSGAGRGAKEANLYT 815
            RDE++ ARLVANPGCYPTSIQ+PLVPL+KANLI L  IIID+KSGVSGAGRGAKEANLYT
Sbjct: 179  RDEVKGARLVANPGCYPTSIQLPLVPLMKANLIQLGGIIIDSKSGVSGAGRGAKEANLYT 238

Query: 814  EIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPMSRGMQSTIYVEMAPGTT 635
            EIAEG++SYGIT+HRHVPEIEQGLS+ A SKVTVSFTPHLMPM RGMQSTIYVEMAPG T
Sbjct: 239  EIAEGMYSYGITRHRHVPEIEQGLSEAAKSKVTVSFTPHLMPMIRGMQSTIYVEMAPGIT 298

Query: 634  TEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVFPDRIPGRAIIISVIDNL 455
            TEDL+Q L+ SY++EEFV +LDKG  P T NVRGSNYC +N+FPDRI GRAII+SVIDNL
Sbjct: 299  TEDLHQHLKVSYKEEEFVRVLDKGVVPRTHNVRGSNYCHINIFPDRIQGRAIIVSVIDNL 358

Query: 454  VKGASGQAIQNLNLMMGIPENTGLLYQPLFP 362
            VKGASGQA+QNLNLMMG  E TGLLYQPLFP
Sbjct: 359  VKGASGQALQNLNLMMGFHETTGLLYQPLFP 389


>gb|ABK24282.1| unknown [Picea sitchensis]
          Length = 415

 Score =  583 bits (1504), Expect = e-164
 Identities = 286/348 (82%), Positives = 314/348 (90%)
 Frame = -2

Query: 1405 ESDKVVRIGVLGASGYTGSEIVRLLANHPQFGISVMTADRKAGQSIGSVFPHLIRQNLPD 1226
            ++ +VVR+GVLGASGYTGSEIVRLLA HP F I++MTADRKAGQS+GSVFPHLI Q+LPD
Sbjct: 68   KAGEVVRVGVLGASGYTGSEIVRLLATHPYFKITLMTADRKAGQSLGSVFPHLITQDLPD 127

Query: 1225 MVAIKDADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPH 1046
            M+AIKDADFS VDAVFCCLPHGTTQEII +LP  LK+VDLSADFRLR   +YEEWY QPH
Sbjct: 128  MIAIKDADFSKVDAVFCCLPHGTTQEIIASLPTTLKVVDLSADFRLRDTTQYEEWYNQPH 187

Query: 1045 RAPDLQKEAIYGLTEVLRDEIRIARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAK 866
            RAPDLQKEAIYGLTE+LR+ IR AR+VANPGCYPTS+Q+PL+PL++A LI  RNIIID+K
Sbjct: 188  RAPDLQKEAIYGLTEILRENIRNARVVANPGCYPTSVQLPLIPLLEAGLIQTRNIIIDSK 247

Query: 865  SGVSGAGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPM 686
            SGVSGAGRGAKEA+LYTEIAEGI+SYGIT+HRHVPEIEQGLSD + SKVTVSFTPHLMPM
Sbjct: 248  SGVSGAGRGAKEASLYTEIAEGINSYGITRHRHVPEIEQGLSDASKSKVTVSFTPHLMPM 307

Query: 685  SRGMQSTIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVF 506
            SRGMQSTIYVEMA G   EDLYQ L S YEDEEFV+LL K A PHTRNVRGSNYCFMNVF
Sbjct: 308  SRGMQSTIYVEMASGVNIEDLYQHLCSRYEDEEFVILLQKKAVPHTRNVRGSNYCFMNVF 367

Query: 505  PDRIPGRAIIISVIDNLVKGASGQAIQNLNLMMGIPENTGLLYQPLFP 362
             DRIPGRAIIISVIDNLVKGASGQA+QNLNLMMG PEN GLL+Q LFP
Sbjct: 368  EDRIPGRAIIISVIDNLVKGASGQALQNLNLMMGYPENLGLLHQALFP 415


>emb|CAN73785.1| hypothetical protein VITISV_023769 [Vitis vinifera]
          Length = 329

 Score =  580 bits (1496), Expect = e-163
 Identities = 279/323 (86%), Positives = 307/323 (95%)
 Frame = -2

Query: 1396 KVVRIGVLGASGYTGSEIVRLLANHPQFGISVMTADRKAGQSIGSVFPHLIRQNLPDMVA 1217
            + VRIGVLGASGYTGSEIVRLLANHP FGI++MTADRKAGQSIGSVFPHLI Q+LPDMVA
Sbjct: 4    QAVRIGVLGASGYTGSEIVRLLANHPHFGITLMTADRKAGQSIGSVFPHLITQDLPDMVA 63

Query: 1216 IKDADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQPHRAP 1037
            IKDA+FSNVDAVFCCLPHGTTQ+IIKALPK LKIVDLSADFRL+ + EYEEWYGQPHRAP
Sbjct: 64   IKDANFSNVDAVFCCLPHGTTQDIIKALPKSLKIVDLSADFRLQEIAEYEEWYGQPHRAP 123

Query: 1036 DLQKEAIYGLTEVLRDEIRIARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDAKSGV 857
            DLQKEA+YGLTE+LR+EI+ ARLVANPGCYPT+IQ+PLVPL+KANLI+ RN+IIDAKSGV
Sbjct: 124  DLQKEAVYGLTEILREEIKAARLVANPGCYPTTIQLPLVPLLKANLIETRNLIIDAKSGV 183

Query: 856  SGAGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMPMSRG 677
            SGAGRGAKEANLYTEIAEGIHSYGIT+HRHVPEIEQGLSD AH+KVTVSFTPHLMPMSRG
Sbjct: 184  SGAGRGAKEANLYTEIAEGIHSYGITRHRHVPEIEQGLSDAAHAKVTVSFTPHLMPMSRG 243

Query: 676  MQSTIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNVFPDR 497
            MQSTIYVEM PG T EDLY++L+ +YEDEEFV+LL+KG  PHTRNVRGSNYC +NVFPDR
Sbjct: 244  MQSTIYVEMTPGVTIEDLYKQLKIAYEDEEFVILLEKGVVPHTRNVRGSNYCLLNVFPDR 303

Query: 496  IPGRAIIISVIDNLVKGASGQAI 428
            IPGRAII+SVIDNLVKGASGQA+
Sbjct: 304  IPGRAIIVSVIDNLVKGASGQAL 326


>ref|XP_002330272.1| predicted protein [Populus trichocarpa] gi|222871307|gb|EEF08438.1|
            predicted protein [Populus trichocarpa]
          Length = 352

 Score =  576 bits (1484), Expect = e-162
 Identities = 280/349 (80%), Positives = 318/349 (91%), Gaps = 1/349 (0%)
 Frame = -2

Query: 1405 ESDKVVRIGVLGASGYTGSEIVRLLANHPQFGISVMTADRKAGQSIGSVFPHLIRQ-NLP 1229
            + +K VR+ +LGASGYTG+EI+RLLANHP FGI+VMTADR AG+S+ SVFPHLI Q +LP
Sbjct: 4    KQEKEVRVALLGASGYTGAEIIRLLANHPYFGITVMTADRNAGKSMDSVFPHLITQKDLP 63

Query: 1228 DMVAIKDADFSNVDAVFCCLPHGTTQEIIKALPKRLKIVDLSADFRLRSVDEYEEWYGQP 1049
             +V+  DADFS+VDAVFCCLPHGTTQEIIK LPK LKIVDLSADFRLR+V EYEEWYGQP
Sbjct: 64   VLVSTSDADFSDVDAVFCCLPHGTTQEIIKGLPKGLKIVDLSADFRLRNVSEYEEWYGQP 123

Query: 1048 HRAPDLQKEAIYGLTEVLRDEIRIARLVANPGCYPTSIQIPLVPLIKANLIDLRNIIIDA 869
            HRAPDLQ+EA+YGLTE+LR+EI+ A LVANPGCYPTSIQ+PLVPLIKANLI+ +NII+DA
Sbjct: 124  HRAPDLQEEAVYGLTEILREEIKNAHLVANPGCYPTSIQLPLVPLIKANLIEHKNIIVDA 183

Query: 868  KSGVSGAGRGAKEANLYTEIAEGIHSYGITKHRHVPEIEQGLSDCAHSKVTVSFTPHLMP 689
            KSGVSGAGRGAK ANLYTE+ EGI SYG+T+HRHVPEIEQGLSD AHSKVT+SFTPHLMP
Sbjct: 184  KSGVSGAGRGAKVANLYTELTEGIMSYGVTRHRHVPEIEQGLSDAAHSKVTISFTPHLMP 243

Query: 688  MSRGMQSTIYVEMAPGTTTEDLYQELRSSYEDEEFVVLLDKGATPHTRNVRGSNYCFMNV 509
            M+RGMQSTIYVEMA G TT++LYQ+L+ SY+DEEFV LL+KGA P T +VRGSNYC++NV
Sbjct: 244  MTRGMQSTIYVEMASGVTTDNLYQQLKVSYQDEEFVRLLEKGAVPRTHDVRGSNYCYINV 303

Query: 508  FPDRIPGRAIIISVIDNLVKGASGQAIQNLNLMMGIPENTGLLYQPLFP 362
            FPDRIPGRAIIISVIDNLVKGASGQA+QNLNLMMG PENTGL Y PLFP
Sbjct: 304  FPDRIPGRAIIISVIDNLVKGASGQALQNLNLMMGFPENTGLGYLPLFP 352


Top