BLASTX nr result

ID: Coptis21_contig00001481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001481
         (1450 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003569456.1| PREDICTED: malate dehydrogenase 1, mitochond...   518   e-144
tpg|DAA58328.1| TPA: malate dehydrogenase [Zea mays]                  517   e-144
ref|NP_001140825.1| uncharacterized protein LOC100272900 [Zea ma...   517   e-144
ref|XP_002456051.1| hypothetical protein SORBIDRAFT_03g029570 [S...   516   e-144
ref|NP_001142100.1| malate dehydrogenase2 [Zea mays] gi|19470711...   516   e-144

>ref|XP_003569456.1| PREDICTED: malate dehydrogenase 1, mitochondrial-like [Brachypodium
            distachyon]
          Length = 340

 Score =  518 bits (1334), Expect = e-144
 Identities = 267/316 (84%), Positives = 283/316 (89%)
 Frame = -1

Query: 1237 QPERKVTVLGAAGGIGQPLALLMKLNPLVSKLALYDIAATPGVAADISHINTRSLVNGYM 1058
            QPERKV +LGAAGGIGQPLALLMKLNPLVS L+LYDIAATPGVAADISHIN+ +LV G+M
Sbjct: 24   QPERKVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIAATPGVAADISHINSPALVKGFM 83

Query: 1057 GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCIAIAKYCPNAVINMIS 878
            GDEQL EALEG+D+VIIPAGVPRKPGMTRDDLFNINAGIVK LC AIAKYCPNA+INMIS
Sbjct: 84   GDEQLAEALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPNALINMIS 143

Query: 877  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXGGHA 698
            NPVNSTVPIAAEVFKKAGTYDEK+LFGVTTLDVVRAKTFY                GGHA
Sbjct: 144  NPVNSTVPIAAEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKANVPVTGVNVPVVGGHA 203

Query: 697  GITILPLFSQATPKGSNLSDEEITALTKRTQDGGTEVVNAKAGKGSATLSMAYAGAVFAD 518
            GITILPLFSQATP  + LS EEI ALTKRTQDGGTEVV AKAGKGSATLSMAYAGAVF D
Sbjct: 204  GITILPLFSQATPASNALSAEEIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFGD 263

Query: 517  ACLKGLNGVQDIVECSYVQSTITDLPFFASKVRLGKNGVEEVLGLGNLTDFEKQGLENLK 338
            ACLKGLNGV DIVECSYVQSTIT+LPFFASKVRLGKNGVEEVLGLG L+DFEK+GLE+LK
Sbjct: 264  ACLKGLNGVPDIVECSYVQSTITELPFFASKVRLGKNGVEEVLGLGQLSDFEKEGLESLK 323

Query: 337  SELKSSIDKGIEFANA 290
             ELKSSI+KGI+FANA
Sbjct: 324  GELKSSIEKGIKFANA 339


>tpg|DAA58328.1| TPA: malate dehydrogenase [Zea mays]
          Length = 410

 Score =  517 bits (1331), Expect = e-144
 Identities = 265/315 (84%), Positives = 283/315 (89%)
 Frame = -1

Query: 1237 QPERKVTVLGAAGGIGQPLALLMKLNPLVSKLALYDIAATPGVAADISHINTRSLVNGYM 1058
            QPERKV +LGAAGGIGQPL+LLMKLNPLVS L+LYDIA TPGVAAD+SHIN+ +LV G+M
Sbjct: 94   QPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINSPALVKGFM 153

Query: 1057 GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCIAIAKYCPNAVINMIS 878
            GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK L  AIAKYCPNA++NMIS
Sbjct: 154  GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKNLSTAIAKYCPNALVNMIS 213

Query: 877  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXGGHA 698
            NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFY                GGHA
Sbjct: 214  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANLPVTDVNVPVVGGHA 273

Query: 697  GITILPLFSQATPKGSNLSDEEITALTKRTQDGGTEVVNAKAGKGSATLSMAYAGAVFAD 518
            GITILPLFSQATP  + LSDE+I ALTKRTQDGGTEVV AKAGKGSATLSMAYAGAVFAD
Sbjct: 274  GITILPLFSQATPATNALSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFAD 333

Query: 517  ACLKGLNGVQDIVECSYVQSTITDLPFFASKVRLGKNGVEEVLGLGNLTDFEKQGLENLK 338
            ACLKGLNGV DIVECS+VQST+T+LPFFASKVRLGKNGVEEVLGLG L+DFEK+GLE LK
Sbjct: 334  ACLKGLNGVPDIVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGELSDFEKEGLEKLK 393

Query: 337  SELKSSIDKGIEFAN 293
            SELKSSI+KGI+FAN
Sbjct: 394  SELKSSIEKGIKFAN 408


>ref|NP_001140825.1| uncharacterized protein LOC100272900 [Zea mays]
            gi|194701300|gb|ACF84734.1| unknown [Zea mays]
          Length = 340

 Score =  517 bits (1331), Expect = e-144
 Identities = 265/315 (84%), Positives = 283/315 (89%)
 Frame = -1

Query: 1237 QPERKVTVLGAAGGIGQPLALLMKLNPLVSKLALYDIAATPGVAADISHINTRSLVNGYM 1058
            QPERKV +LGAAGGIGQPL+LLMKLNPLVS L+LYDIA TPGVAAD+SHIN+ +LV G+M
Sbjct: 24   QPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINSPALVKGFM 83

Query: 1057 GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCIAIAKYCPNAVINMIS 878
            GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK L  AIAKYCPNA++NMIS
Sbjct: 84   GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKNLSTAIAKYCPNALVNMIS 143

Query: 877  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXGGHA 698
            NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFY                GGHA
Sbjct: 144  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANLPVTDVNVPVVGGHA 203

Query: 697  GITILPLFSQATPKGSNLSDEEITALTKRTQDGGTEVVNAKAGKGSATLSMAYAGAVFAD 518
            GITILPLFSQATP  + LSDE+I ALTKRTQDGGTEVV AKAGKGSATLSMAYAGAVFAD
Sbjct: 204  GITILPLFSQATPATNALSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFAD 263

Query: 517  ACLKGLNGVQDIVECSYVQSTITDLPFFASKVRLGKNGVEEVLGLGNLTDFEKQGLENLK 338
            ACLKGLNGV DIVECS+VQST+T+LPFFASKVRLGKNGVEEVLGLG L+DFEK+GLE LK
Sbjct: 264  ACLKGLNGVPDIVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGELSDFEKEGLEKLK 323

Query: 337  SELKSSIDKGIEFAN 293
            SELKSSI+KGI+FAN
Sbjct: 324  SELKSSIEKGIKFAN 338


>ref|XP_002456051.1| hypothetical protein SORBIDRAFT_03g029570 [Sorghum bicolor]
            gi|241928026|gb|EES01171.1| hypothetical protein
            SORBIDRAFT_03g029570 [Sorghum bicolor]
          Length = 340

 Score =  516 bits (1330), Expect = e-144
 Identities = 264/315 (83%), Positives = 284/315 (90%)
 Frame = -1

Query: 1237 QPERKVTVLGAAGGIGQPLALLMKLNPLVSKLALYDIAATPGVAADISHINTRSLVNGYM 1058
            QPERKV +LGAAGGIGQPL+LLMKLNPLVS L+LYDIA TPGVAAD+SHIN+ +LV G+M
Sbjct: 24   QPERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINSPALVKGFM 83

Query: 1057 GDEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCIAIAKYCPNAVINMIS 878
            G+EQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVK L  AIAKYCPNA++NMIS
Sbjct: 84   GEEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKNLSAAIAKYCPNALVNMIS 143

Query: 877  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXGGHA 698
            NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFY                GGHA
Sbjct: 144  NPVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKANLPVTDVNVPVVGGHA 203

Query: 697  GITILPLFSQATPKGSNLSDEEITALTKRTQDGGTEVVNAKAGKGSATLSMAYAGAVFAD 518
            GITILPLFSQATP  ++LSDE+I ALTKRTQDGGTEVV AKAGKGSATLSMAYAGAVFAD
Sbjct: 204  GITILPLFSQATPATNSLSDEDIKALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFAD 263

Query: 517  ACLKGLNGVQDIVECSYVQSTITDLPFFASKVRLGKNGVEEVLGLGNLTDFEKQGLENLK 338
            ACLKGLNGV DIVECS+VQST+T+LPFFASKVRLGKNGVEEVLGLG L+DFEK+GLE LK
Sbjct: 264  ACLKGLNGVPDIVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGELSDFEKEGLEKLK 323

Query: 337  SELKSSIDKGIEFAN 293
            SELKSSI+KGI+FAN
Sbjct: 324  SELKSSIEKGIKFAN 338


>ref|NP_001142100.1| malate dehydrogenase2 [Zea mays] gi|194707114|gb|ACF87641.1| unknown
            [Zea mays] gi|413946626|gb|AFW79275.1| malate
            dehydrogenase2 [Zea mays]
          Length = 340

 Score =  516 bits (1328), Expect = e-144
 Identities = 262/314 (83%), Positives = 283/314 (90%)
 Frame = -1

Query: 1234 PERKVTVLGAAGGIGQPLALLMKLNPLVSKLALYDIAATPGVAADISHINTRSLVNGYMG 1055
            PERKV +LGAAGGIGQPL+LLMKLNPLVS L+LYDIA TPGVAAD+SHIN+ +LV G+MG
Sbjct: 25   PERKVAILGAAGGIGQPLSLLMKLNPLVSSLSLYDIAGTPGVAADVSHINSPALVKGFMG 84

Query: 1054 DEQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCIAIAKYCPNAVINMISN 875
            D+QLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLC AIAK+CPNA++NMISN
Sbjct: 85   DDQLGEALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKGLCTAIAKHCPNALVNMISN 144

Query: 874  PVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYXXXXXXXXXXXXXXXXGGHAG 695
            PVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFY                GGHAG
Sbjct: 145  PVNSTVPIAAEVFKKAGTYDEKKLFGVTTLDVVRAKTFYAGKAGVPVTGVNVPVVGGHAG 204

Query: 694  ITILPLFSQATPKGSNLSDEEITALTKRTQDGGTEVVNAKAGKGSATLSMAYAGAVFADA 515
            ITILPLFSQATP  ++LS E+I ALTKRTQDGGTEVV AKAGKGSATLSMAYAGAVFADA
Sbjct: 205  ITILPLFSQATPASNSLSQEDIEALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAVFADA 264

Query: 514  CLKGLNGVQDIVECSYVQSTITDLPFFASKVRLGKNGVEEVLGLGNLTDFEKQGLENLKS 335
            CLKGLNGV DIVECS+VQST+T+LPFFASKVRLGKNGVEEVLGLG L +FEK+GLENLK 
Sbjct: 265  CLKGLNGVPDIVECSFVQSTVTELPFFASKVRLGKNGVEEVLGLGELNEFEKKGLENLKG 324

Query: 334  ELKSSIDKGIEFAN 293
            ELKSSIDKGI+FA+
Sbjct: 325  ELKSSIDKGIKFAH 338


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