BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001473
         (1322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]            313   8e-83
ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-l...   303   5e-80
gb|AFK43283.1| unknown [Lotus japonicus]                              301   2e-79
gb|ACM45083.1| shikimate kinase [Vitis vinifera]                      300   4e-79
ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [...   300   4e-79

>gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
          Length = 302

 Score =  313 bits (801), Expect = 8e-83
 Identities = 167/284 (58%), Positives = 206/284 (72%)
 Frame = -3

Query: 1128 SSSIGIEKTSRKTXXXXXXXXXXXXXXXXFVVLNSGKRWRGAVMKTGERKFVDFELSCSY 949
            S  IG E+ +R+T                 V++++  + +     +   K    E+SCSY
Sbjct: 12   SPRIGSERFARRTCGSVRVSRRFREQDRLPVLVSA--QLQDKTRNSNWHKTASLEVSCSY 69

Query: 948  KNTQAPAVESETNYTSVNEALILKKKSQDVAPYLSGCCIYLVGMMGSGKTTVGKILSEVL 769
            KN  A  +ES   +   ++ALILK KSQ++ PYLSG CIYLVGMMGSGKTTVGK+LS+VL
Sbjct: 70   KNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGKTTVGKVLSQVL 129

Query: 768  GYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRRLVVATGGGAVIR 589
             Y+F DSD LVEQ V A SVA+IF  Y E FFR+ ET+VL  LSLM RLVV+TGGGAV+R
Sbjct: 130  SYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRLVVSTGGGAVVR 189

Query: 588  PINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKALVRLSVLSEERG 409
            PINWKYM++GI+VWLDVPLEALARRIAAVGT SRPLLH++ GDAYTK  +RL+ L EER 
Sbjct: 190  PINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKTFMRLTSLMEERS 249

Query: 408  EVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHI 277
            E YANA+ARV LE V +K+G RDV++LTPTAIA+EAL QIE  +
Sbjct: 250  EAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFL 293


>ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
          Length = 295

 Score =  303 bits (777), Expect = 5e-80
 Identities = 152/238 (63%), Positives = 189/238 (79%)
 Frame = -3

Query: 984 RKFVDFELSCSYKNTQAPAVESETNYTSVNEALILKKKSQDVAPYLSGCCIYLVGMMGSG 805
           R+    E+SCSY N  A  +ES +    ++E LILK +SQ++ PYL+G CIYLVGMMGSG
Sbjct: 50  RRTTALEVSCSYGNISASILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGSG 109

Query: 804 KTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRR 625
           KTTVGKI+S+VLGYSF DSD LVE+ VG  SVA IFK++ E FFR  ET+VL  LSLM +
Sbjct: 110 KTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFRNKETEVLHKLSLMHQ 169

Query: 624 LVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKA 445
           LV++TGGGAV RPINWKYM +G++VWLDVP+EALA+RIAAVGT SRPLLH E GD YT+A
Sbjct: 170 LVISTGGGAVTRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDPYTRA 229

Query: 444 LVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHING 271
            +RLS L EERGE YANA+ARV L+++  K+G RDV++L+PT IA+EAL QI+N + G
Sbjct: 230 FMRLSALFEERGEAYANANARVSLKNIAIKLGKRDVSELSPTDIAIEALEQIDNFLKG 287


>gb|AFK43283.1| unknown [Lotus japonicus]
          Length = 299

 Score =  301 bits (771), Expect = 2e-79
 Identities = 152/242 (62%), Positives = 186/242 (76%)
 Frame = -3

Query: 996 KTGERKFVDFELSCSYKNTQAPAVESETNYTSVNEALILKKKSQDVAPYLSGCCIYLVGM 817
           K   R+    E++CSY N  A  +ES +    +++ LIL+ +SQ++ PYL+G CIYLVGM
Sbjct: 50  KIHRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILENRSQEIQPYLNGRCIYLVGM 109

Query: 816 MGSGKTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLS 637
           MGSGKTTVGKI+S+VLGY F DSD LVE+ VG  SVA IF  Y E FFR+ ET+ L  LS
Sbjct: 110 MGSGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLS 169

Query: 636 LMRRLVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDA 457
           +M R +V+TGGGAV+RPINWKYM +GI+VWLDVP+EALA+RIAAVGT SRPLLH E GDA
Sbjct: 170 MMHRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDA 229

Query: 456 YTKALVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHI 277
           YT+AL+RLS L EERGE YANA ARV LE + +K G RDV DL+PTAIA+EAL QI+  +
Sbjct: 230 YTRALMRLSALFEERGEAYANASARVSLEKIATKRGQRDVLDLSPTAIAIEALEQIDAFL 289

Query: 276 NG 271
            G
Sbjct: 290 KG 291


>gb|ACM45083.1| shikimate kinase [Vitis vinifera]
          Length = 300

 Score =  300 bits (769), Expect = 4e-79
 Identities = 154/238 (64%), Positives = 186/238 (78%)
 Frame = -3

Query: 984 RKFVDFELSCSYKNTQAPAVESETNYTSVNEALILKKKSQDVAPYLSGCCIYLVGMMGSG 805
           +K V  E S SY+N  AP +ES +   S++EALILK KSQ++ PY+ G C+YLVGMMGSG
Sbjct: 55  QKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSG 114

Query: 804 KTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRR 625
           KTT+GKILSEVLGYSF DSD LVE AV   SVA+IF  Y E FFR  E++ L  LSL   
Sbjct: 115 KTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHH 174

Query: 624 LVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKA 445
           +VV+TGGGAVIRPINWKYM +GI+VWLDVPLEALARRI+AVGT SRPLLH++ GDAY + 
Sbjct: 175 MVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSGDAYNRT 234

Query: 444 LVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHING 271
           L RLS L +ERG+ YANA+ARV LE + +K+G RDV +LTPT IA+EAL+QIE  + G
Sbjct: 235 LTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLKG 292


>ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
           gi|147772563|emb|CAN67344.1| hypothetical protein
           VITISV_038221 [Vitis vinifera]
           gi|296082504|emb|CBI21509.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  300 bits (769), Expect = 4e-79
 Identities = 154/238 (64%), Positives = 186/238 (78%)
 Frame = -3

Query: 984 RKFVDFELSCSYKNTQAPAVESETNYTSVNEALILKKKSQDVAPYLSGCCIYLVGMMGSG 805
           +K V  E S SY+N  AP +ES +   S++EALILK KSQ++ PY+ G C+YLVGMMGSG
Sbjct: 55  QKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSG 114

Query: 804 KTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRR 625
           KTT+GKILSEVLGYSF DSD LVE AV   SVA+IF  Y E FFR  E++ L  LSL   
Sbjct: 115 KTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHH 174

Query: 624 LVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKA 445
           +VV+TGGGAVIRPINWKYM +GI+VWLDVPLEALARRI+AVGT SRPLLH++ GDAY + 
Sbjct: 175 MVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSGDAYNRT 234

Query: 444 LVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHING 271
           L RLS L +ERG+ YANA+ARV LE + +K+G RDV +LTPT IA+EAL+QIE  + G
Sbjct: 235 LTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLKG 292