BLASTX nr result

ID: Coptis21_contig00001472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001472
         (2496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23686.3| unnamed protein product [Vitis vinifera]              299   2e-78
gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]      253   2e-64
ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266...   250   1e-63
gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]        225   4e-56
ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840...   223   3e-55

>emb|CBI23686.3| unnamed protein product [Vitis vinifera]
          Length = 882

 Score =  299 bits (766), Expect = 2e-78
 Identities = 203/479 (42%), Positives = 256/479 (53%), Gaps = 3/479 (0%)
 Frame = +1

Query: 757  AGTSSDFQSLNQTVSTDRERESFDATTGVPEKSVPAVDATSDIVKDSPHKIFIGGISKDL 936
            A  S D  S + ++   R  + F   TGV EK V A DA SDIVKDSPHKIFIGGIS+ L
Sbjct: 465  AALSFDGISFSGSILKIRRPKDFVDMTGVQEKLVAAPDAISDIVKDSPHKIFIGGISRAL 524

Query: 937  SSDMLLEIVSSFGHLKAYRFQVNEDLKEPCAFLEYMDQTITLKACAGLNGMKLAGQVLTA 1116
            SSDML+EI ++FG LKAYRFQVNEDL EPCAFLEY+DQ++TLKACAGLNGMKL GQVLT 
Sbjct: 525  SSDMLMEIAAAFGPLKAYRFQVNEDLGEPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTV 584

Query: 1117 VQAFPDASVEENS-KILFYGIPEHAKPLLLEPTKVLKLKNVFNPADXXXXXXXXXXXXXX 1293
            VQA P+A   EN+  + FYGIPEHAKPLL  PT+VLKLKNV NP D              
Sbjct: 585  VQAIPNALAMENTGNLPFYGIPEHAKPLLERPTQVLKLKNVVNPDDLSSLSEAELEEILE 644

Query: 1294 DIRIECARFGTIKSINIVRCESIHATESQAVVITNQTDAGVLQDREGDSATKNTQTLDQD 1473
            DIR+EC RFGT+KS+NIV+  + H +  +     + T + +  D  G+S    T     D
Sbjct: 645  DIRLECTRFGTVKSVNIVKYNNSHVSTLEVYEAADNTGSNLGCD--GNSMKAETLGGGTD 702

Query: 1474 ISHNCEQIPATPANMKESLEDVGDSKGEGESTTKSPETLEQHTNHNSGENSTTEAPNIVK 1653
                 E +     +  +SL D+                      +   E S  ++   VK
Sbjct: 703  NGSIDEVVERNSISDDKSLTDL--------------------IKNELCEPSHIDSNTAVK 742

Query: 1654 EP-LEDGGDFKGDRPSGDKAEVLTKTGVCELYSSLVTDVPAYDLDTDVNPQEVLSLLDTR 1830
            EP   DG D                            D+P    D   N +  + L   R
Sbjct: 743  EPGCPDGSD----------------------------DIPRGLPDQLNNMKHEVEL---R 771

Query: 1831 KDEFINGADHIQNEDASMNDSILVEEELKQEEANDELQEASVQLHHAVGEECK-TSEREE 2007
             D+    AD IQ +    N  + VE     EE N +L   S +L  + G +   T + + 
Sbjct: 772  NDK---AADVIQEDFIIKNKLMTVE-----EETNRKLLGTSAELDSSPGIKSDFTGKNDS 823

Query: 2008 SKQLVSVDEHFEHGTVLVEYVRTEASVMAAHCLHRRPYGDRIVLVSYIPHDLYISRFPK 2184
             K L  +D+ FE G VLVEY RTEAS MAAHCLH R + DR+V+V Y+  DLY  +FP+
Sbjct: 824  EKGLCDLDDMFEVGCVLVEYGRTEASCMAAHCLHGRYFDDRVVVVGYVALDLYRMKFPR 882


>gb|ABK96758.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 787

 Score =  253 bits (645), Expect = 2e-64
 Identities = 171/486 (35%), Positives = 256/486 (52%), Gaps = 10/486 (2%)
 Frame = +1

Query: 757  AGTSSDFQSLNQTVSTDRERESF-DATTGVPEKSVPAVDATSDIVKDSPHKIFIGGISKD 933
            A  S D +S + ++   R  + F +  TG  EKS  A+DA  DIVKDSPHKIFIGGISK 
Sbjct: 357  AALSFDGRSFSGSIIKVRRPKDFIEVATGELEKSAAAIDAIGDIVKDSPHKIFIGGISKV 416

Query: 934  LSSDMLLEIVSSFGHLKAYRFQVNEDLKEPCAFLEYMDQTITLKACAGLNGMKLAGQVLT 1113
            LSS ML+EI S+FG LKAY+F+  +D  EP AFLEY D+++T KACAGLNGMKL GQV+T
Sbjct: 417  LSSKMLMEIASAFGPLKAYQFENRKDPDEPFAFLEYADESVTFKACAGLNGMKLGGQVIT 476

Query: 1114 AVQAFPDASVE-ENSKILFYGIPEHAKPLLLEPTKVLKLKNVFNPADXXXXXXXXXXXXX 1290
            A+QA P+AS    +    F  I +HAK LL +PT+VLKLKNVF+                
Sbjct: 477  AIQAVPNASSSGSDGNSQFGQISQHAKALLEKPTEVLKLKNVFDSESLSSLSNTEVEEVL 536

Query: 1291 XDIRIECARFGTIKSINIVRCESIHATESQAVVITNQTDAGVLQDREGDSATKNTQTLDQ 1470
             D+R+ECARFG++KSIN+++  +I  + S++    + T            + + TQ+L  
Sbjct: 537  EDVRLECARFGSVKSINVIKYAAITISTSKSCEFNDDT-----------VSAEATQSL-- 583

Query: 1471 DISHNCEQIPATPANMKESLE-------DVGDSKGEGESTTKSPETLEQHTNHNSGENST 1629
                 C+       N++ S++        +GD K   +     P    Q  +  + ++  
Sbjct: 584  ----GCDGTNPKTRNIRGSIDQKFMEGNSIGDDKPASDVMEDEPCQPGQVDSDMAVQDLA 639

Query: 1630 TEAPNIVKEPLEDGGDFKGDRPSGDKAEVLTKTGVCELYSSLVTDVPAYDLDTDVNPQEV 1809
             ++ +  +EP +D  D   D+ + D                   ++   D +      E 
Sbjct: 640  CKSSSDSQEPPQDVSDSNVDKVTDD------------------IEIEEVDAENKSTAGED 681

Query: 1810 LSLLDTRKDEFINGADHIQNEDASMNDSILVEEELKQEEANDELQEASVQLHHAVGEECK 1989
            L+L +   ++ + G                  EEL  EE + ++++A V  + ++  +  
Sbjct: 682  LNLKEVGDNKLMAG------------------EELNLEEVSGDVEKAFV--NDSMEMKPN 721

Query: 1990 TSEREESK-QLVSVDEHFEHGTVLVEYVRTEASVMAAHCLHRRPYGDRIVLVSYIPHDLY 2166
            + E+ + K Q  S+   FE G V VE+ RTE + MAAHCLH R + DR V+V Y+P D+Y
Sbjct: 722  SIEKGDCKEQDCSLGLIFERGCVFVEFRRTEGACMAAHCLHGRLFDDRAVVVEYVPLDIY 781

Query: 2167 ISRFPK 2184
            ++RFPK
Sbjct: 782  LARFPK 787



 Score = 87.8 bits (216), Expect = 1e-14
 Identities = 80/237 (33%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
 Frame = +1

Query: 169 KKHSETLVRRDRYIDSDTMXXXXXXXXXXXXXXXXXDRLETVGYAVKKHDSGK-QNLEPV 345
           KKHS   V++DR++D                      R      A KKHD GK  +LE  
Sbjct: 37  KKHSRE-VQKDRHVDKSRGKSERERKEKYRNGIDDKSRDRN---AAKKHDLGKGHHLETS 92

Query: 346 ERKDRMKDSSKSHYDGPEQKXXXXXXXXXXXXXXXT-SLSPRVHKR-TYDGREHGESSLH 519
           ERK+R K+SSKSH++    K               + SLSPR HKR +Y  REH E SLH
Sbjct: 93  ERKER-KESSKSHHEELRLKRRRSRSREHEDRNRRSISLSPRAHKRGSYHKREHVELSLH 151

Query: 520 SSNER--RQHSDVDRNKVSNNXXXXXXXXXXXXXXXXXXXXXXPRKRRSEAAIXXXXXXX 693
           S  ER  RQ SD + N+++N+                      PRKR++EAA+       
Sbjct: 152 SVKERSGRQQSDAENNQLANS--SSSRHQRRHGGFASGLGGYSPRKRKTEAAVKTPSPAK 209

Query: 694 XXXXXXXAGWDLPPVGTGSIL-AGTSSDFQSLNQTVSTDRERESFDATTGVPEKSVP 861
                  A WDL P  T ++  A   S+FQS NQT S++      +  + VP  S P
Sbjct: 210 RSPEKKSAKWDLAPEETNNVFPAVILSNFQSPNQTASSN----IHEVVSAVPVVSAP 262


>ref|XP_002281833.2| PREDICTED: uncharacterized protein LOC100266510 [Vitis vinifera]
          Length = 895

 Score =  250 bits (639), Expect = 1e-63
 Identities = 171/424 (40%), Positives = 227/424 (53%), Gaps = 10/424 (2%)
 Frame = +1

Query: 943  DMLLEIVSSFGHLKAYRFQVNEDLKEPCAFLEYMDQTITLKACAGLNGMKLAGQVLTAVQ 1122
            D L+EI ++FG LKAYRFQVNEDL EPCAFLEY+DQ++TLKACAGLNGMKL GQVLT VQ
Sbjct: 523  DFLMEIAAAFGPLKAYRFQVNEDLGEPCAFLEYVDQSVTLKACAGLNGMKLGGQVLTVVQ 582

Query: 1123 AFPDASVEENS-KILFYGIPEHAKPLLLEPTKVLKLKNVFNPADXXXXXXXXXXXXXXDI 1299
            A P+A   EN+  + FYGIPEHAKPLL  PT+VLKLKNV NP D              DI
Sbjct: 583  AIPNALAMENTGNLPFYGIPEHAKPLLERPTQVLKLKNVVNPDDLSSLSEAELEEILEDI 642

Query: 1300 RIECARFGTIKSINIVRCESIHATESQAVVITNQTDAGVLQDREGDSATKNTQTLDQDIS 1479
            R+EC RFGT+KS+NIV+  + H +                             TL+    
Sbjct: 643  RLECTRFGTVKSVNIVKYNNSHVS-----------------------------TLE---- 669

Query: 1480 HNCEQIPATPANMKESLEDVGDSKGEGESTTKSPETLEQHTNHNSGENSTTEAPNIVKEP 1659
                        + E+ ++ G + G   ++ K+ ETL   T++ S + S  + P  VK+ 
Sbjct: 670  ------------VYEAADNTGSNLGCDGNSMKA-ETLGGGTDNGSSDISGIKPPTDVKDL 716

Query: 1660 LEDGGDFKGDRPSGDKAEV-LTKTGVCE---LYSSLVTDVPAYDLDTDVNPQEVLSLLDT 1827
             E     + +  S DK+   L K  +CE   + S+     P     +D  P+ +   L+ 
Sbjct: 717  KEVDEVVERNSISDDKSLTDLIKNELCEPSHIDSNTAVKEPGCPDGSDDIPRGLPDQLNN 776

Query: 1828 RKDEF----INGADHIQNEDASMNDSILVEEELKQEEANDELQEASVQLHHAVGEECK-T 1992
             K E        AD IQ +    N  + VE     EE N +L   S +L  + G +   T
Sbjct: 777  MKHEVELRNDKAADVIQEDFIIKNKLMTVE-----EETNRKLLGTSAELDSSPGIKSDFT 831

Query: 1993 SEREESKQLVSVDEHFEHGTVLVEYVRTEASVMAAHCLHRRPYGDRIVLVSYIPHDLYIS 2172
             + +  K L  +D+ FE G VLVEY RTEAS MAAHCLH R + DR+V+V Y+  DLY  
Sbjct: 832  GKNDSEKGLCDLDDMFEVGCVLVEYGRTEASCMAAHCLHGRYFDDRVVVVGYVALDLYRM 891

Query: 2173 RFPK 2184
            +FP+
Sbjct: 892  KFPR 895


>gb|AFW89625.1| hypothetical protein ZEAMMB73_282398 [Zea mays]
          Length = 635

 Score =  225 bits (574), Expect = 4e-56
 Identities = 166/480 (34%), Positives = 236/480 (49%), Gaps = 4/480 (0%)
 Frame = +1

Query: 757  AGTSSDFQSLNQTVSTDRERESFDATTGVPEKSVPAVDATSDIVKDSPHKIFIGGISKDL 936
            A  S D +SLN +V   R  + +  T  V  K        SD+V DSP+KIFI GI+  +
Sbjct: 195  AAISFDGRSLNGSVLRIRRPKEYVETVNVTPKKAEETALISDVVADSPYKIFIAGIAGVI 254

Query: 937  SSDMLLEIVSSFGHLKAYRFQVNEDLKEPCAFLEYMDQTITLKACAGLNGMKLAGQVLTA 1116
            SS ML+EIVS+FG L AYRF  N +L  PCAFLEY D+++T KACAGLNGM L G+VLTA
Sbjct: 255  SSKMLMEIVSAFGPLAAYRFLFNNELGGPCAFLEYADRSVTSKACAGLNGMMLGGRVLTA 314

Query: 1117 VQAFPDASVE-ENSKILFYGIPEHAKPLLLEPTKVLKLKNVFNPADXXXXXXXXXXXXXX 1293
            V  FP+  VE  N    FYGIP++AK LL EPTKVL+LKNVF   +              
Sbjct: 315  VHVFPNPHVEAANEASPFYGIPDNAKLLLKEPTKVLQLKNVFEREEYMLLSKSELEETLE 374

Query: 1294 DIRIECARFGTIKSINIVRCESIHATESQAVVITNQTDAGVLQDREGDSATKNTQTLDQD 1473
            D+R+EC RFG +KS+N+V   +   + ++  ++  + +     D         T+ + + 
Sbjct: 375  DVRVECTRFGAVKSVNVVEYPAAGVSAAEENIVELKIECTEFSD---------TENIAKA 425

Query: 1474 ISHNCEQIPATPANMKESLEDVGDSKGEGESTTKSPETLEQHTNH--NSGENSTTEAPNI 1647
            +S     +P  P+    +     D+K         PE+ +Q   H  ++     +EAP  
Sbjct: 426  VSE--YSVPIIPSIDVLNHSVASDTK----DVDLIPESQDQKDKHLPSNAALCESEAPVA 479

Query: 1648 VKEPLEDGGDFKGDRPSGDKAEV-LTKTGVCELYSSLVTDVPAYDLDTDVNPQEVLSLLD 1824
             ++   D    +   P+   AE   T+  V E   +    V A   D D   +   S  D
Sbjct: 480  DEDAELDETQSRAALPTPQHAEADHTEAAVDENKHTGAGKVTATATDDDAVEK---SHGD 536

Query: 1825 TRKDEFINGADHIQNEDASMNDSILVEEELKQEEANDELQEASVQLHHAVGEECKTSERE 2004
             R  E  N         A   D         ++ A D  ++   +   AVG    TS+  
Sbjct: 537  PRTSETCN--------PAGPTDKAEKPGRYSEQGAGDVTEDRPEKEAQAVG----TSD-- 582

Query: 2005 ESKQLVSVDEHFEHGTVLVEYVRTEASVMAAHCLHRRPYGDRIVLVSYIPHDLYISRFPK 2184
                       FE G+VLVE++R EA+ MAAH LH R +G+R V   Y P+DLY+ ++P+
Sbjct: 583  -------TGFVFEPGSVLVEFLREEAACMAAHSLHGRRFGNRTVHAGYAPYDLYLQKYPR 635


>ref|XP_003558854.1| PREDICTED: uncharacterized protein LOC100840355 [Brachypodium
            distachyon]
          Length = 840

 Score =  223 bits (567), Expect = 3e-55
 Identities = 171/505 (33%), Positives = 238/505 (47%), Gaps = 29/505 (5%)
 Frame = +1

Query: 757  AGTSSDFQSLN-QTVSTDRERESFDATTGVPEKSVPAVDATSDIVKDSPHKIFIGGISKD 933
            A  S D +S N   +   R +E  +    VP+K+V  +   SD+  DSPHKIF+ GIS  
Sbjct: 400  AALSFDGRSFNGSALKIRRPKEYIEMANVVPKKTVEEIKLASDVA-DSPHKIFVAGISGV 458

Query: 934  LSSDMLLEIVSSFGHLKAYRFQVNEDLKEPCAFLEYMDQTITLKACAGLNGMKLAGQVLT 1113
            +SS+ML+EIVSSFG L AYRFQ +E L   CAFLEY+D +IT KACAGLNGMKL G +LT
Sbjct: 459  ISSEMLMEIVSSFGQLAAYRFQDHEALSGRCAFLEYIDHSITDKACAGLNGMKLGGCILT 518

Query: 1114 AVQAFPDASVEENSKILFYGIPEHAKPLLLEPTKVLKLKNVFNPADXXXXXXXXXXXXXX 1293
            AVQ FP+     N    FY IP+ AK LL  PT+VL+LKNVF+  +              
Sbjct: 519  AVQVFPNPLEACNEASPFYSIPDSAKMLLEAPTEVLQLKNVFDREEYLLLSKSELEEIME 578

Query: 1294 DIRIECARFGTIKSINIVRCESIHATESQAVVITNQTDAGVLQDREGDSATKNTQTLDQD 1473
            DIR+ECARFG +KSINIV   +   +  Q +++         + ++G    + T+     
Sbjct: 579  DIRMECARFGAVKSINIVEYPASSDSTLQDIIV---------EPKDGPVKLEPTE----- 624

Query: 1474 ISHNCEQIPATPANMKESLEDVGDSKGEGESTTKSPETLEQHTNHNSGENSTTEAPNIVK 1653
               +C +I                   E  S +KS            G +   E  ++  
Sbjct: 625  ---HCAEIVT-----------------ECSSPSKSISV--------PGHSDPAETKDV-- 654

Query: 1654 EPLEDGGDFKGDRPSGDKAEVLTKTGVCELYSSLVTDVP-AYDLDTDVNPQEVLSLLDTR 1830
                       D PS +  E      +CE       DVP A D  TD++     +  D  
Sbjct: 655  -----------DHPSSESQEHKELDTLCE------CDVPAAVDQYTDLDHIHA-TAADPA 696

Query: 1831 KDEFINGADHIQNEDASMNDSILVEEELKQEEANDELQEA-----SVQLHHAVGEECKTS 1995
             D+ +  ADH+ ++ A   DS   +      + +  +  A      +      G+   TS
Sbjct: 697  LDQHME-ADHMDSKQAVHMDSTQADHHATTVDDDSAVGHAGPRTLEICSSTTPGDVVDTS 755

Query: 1996 EREESKQ----------------------LVSVDEHFEHGTVLVEYVRTEASVMAAHCLH 2109
            ERE  +Q                      LVS     E G++LVE++R EA+ MAAH LH
Sbjct: 756  ERENQQQGTNDVSESGAEQLPEAGTRDDALVSGTIMLEAGSILVEFMRKEAACMAAHSLH 815

Query: 2110 RRPYGDRIVLVSYIPHDLYISRFPK 2184
             R +GDR +   Y PHDLY+  +P+
Sbjct: 816  GRSFGDRSLSAGYAPHDLYLQMYPR 840


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