BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001470
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloropla...    94   9e-18
ref|XP_002300047.1| peptide deformylase [Populus trichocarpa] gi...    93   2e-17
ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloropla...    90   2e-16
ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus c...    89   5e-16
ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solan...    87   2e-15

>ref|XP_002276964.1| PREDICTED: peptide deformylase 1B, chloroplastic [Vitis vinifera]
           gi|296087647|emb|CBI34903.3| unnamed protein product
           [Vitis vinifera]
          Length = 275

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 44/61 (72%), Positives = 51/61 (83%)
 Frame = -1

Query: 217 HEFDHLQGTLFFDRMTEEVLDSISAELQALEKKFEDVTGLPSPEDVNSHIRKRVVAGFGR 38
           HEFDHLQGTLFFDRMTEEVLDSI A LQ LE+K+ED TG PSPE + +  R++V AGFG+
Sbjct: 215 HEFDHLQGTLFFDRMTEEVLDSIHANLQDLERKYEDRTGFPSPERIETRKRRKVAAGFGK 274

Query: 37  S 35
           S
Sbjct: 275 S 275


>ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
           gi|222847305|gb|EEE84852.1| peptide deformylase [Populus
           trichocarpa]
          Length = 258

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/60 (73%), Positives = 49/60 (81%)
 Frame = -1

Query: 217 HEFDHLQGTLFFDRMTEEVLDSISAELQALEKKFEDVTGLPSPEDVNSHIRKRVVAGFGR 38
           HEFDHLQG LFFDRMTEEVLDSI   LQALEKK+ED TG PSPE + +H  K+V AGFG+
Sbjct: 199 HEFDHLQGILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258


>ref|XP_004158319.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Cucumis
           sativus]
          Length = 273

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/61 (70%), Positives = 53/61 (86%)
 Frame = -1

Query: 217 HEFDHLQGTLFFDRMTEEVLDSISAELQALEKKFEDVTGLPSPEDVNSHIRKRVVAGFGR 38
           HEFDHLQGTLFFDRMT+EVL++I  +LQALEKK+ED TGLPSPE +  + R++V AGFG+
Sbjct: 214 HEFDHLQGTLFFDRMTDEVLETIRPQLQALEKKYEDRTGLPSPERI-ENFRRKVGAGFGK 272

Query: 37  S 35
           S
Sbjct: 273 S 273


>ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus communis]
           gi|223539350|gb|EEF40941.1| polypeptide deformylase,
           putative [Ricinus communis]
          Length = 282

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 41/61 (67%), Positives = 49/61 (80%)
 Frame = -1

Query: 217 HEFDHLQGTLFFDRMTEEVLDSISAELQALEKKFEDVTGLPSPEDVNSHIRKRVVAGFGR 38
           HE+DHL+G LFFDRMT+EVLDSI A+LQALEKKFED TG  SPE + +   K+  AGFG+
Sbjct: 222 HEYDHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDKTGYASPEKIETRKTKKAAAGFGK 281

Query: 37  S 35
           S
Sbjct: 282 S 282


>ref|NP_001234441.1| peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
           gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName:
           Full=Peptide deformylase 1B, chloroplastic; Short=PDF
           1B; AltName: Full=Polypeptide deformylase; Flags:
           Precursor gi|11320950|gb|AAG33972.1| peptide
           deformylase-like protein [Solanum lycopersicum]
          Length = 279

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/61 (63%), Positives = 49/61 (80%)
 Frame = -1

Query: 217 HEFDHLQGTLFFDRMTEEVLDSISAELQALEKKFEDVTGLPSPEDVNSHIRKRVVAGFGR 38
           HEFDHLQG LFFD+MT+EVLD+I  +L ALEKK+ED TGLP+PE +N+   K+   GFG+
Sbjct: 219 HEFDHLQGVLFFDKMTDEVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGK 278

Query: 37  S 35
           S
Sbjct: 279 S 279