BLASTX nr result

ID: Coptis21_contig00001467 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001467
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q945U1.1|RS15_ELAOL RecName: Full=40S ribosomal protein S15 g...   196   6e-48
gb|AFK41481.1| unknown [Lotus japonicus]                              189   5e-46
ref|XP_002517015.1| 40S ribosomal protein S15, putative [Ricinus...   189   9e-46
ref|XP_002520996.1| 40S ribosomal protein S15, putative [Ricinus...   189   9e-46
sp|P31674.2|RS15_ORYSJ RecName: Full=40S ribosomal protein S15 g...   188   1e-45

>sp|Q945U1.1|RS15_ELAOL RecName: Full=40S ribosomal protein S15 gi|15425963|gb|AAK97632.1|
           40S ribosomal protein S15 [Elaeis oleifera]
           gi|192910788|gb|ACF06502.1| 40S ribosomal protein S15
           [Elaeis guineensis]
          Length = 153

 Score =  196 bits (498), Expect = 6e-48
 Identities = 97/105 (92%), Positives = 101/105 (96%)
 Frame = +1

Query: 1   GAAPKRRTFRKFAFRGVDLDQLLDMGTDELVKLFTARARRRFQRGLKRKPMALIKKLRKA 180
           GA PK+RTFRKF++RGVDLDQLLDMGTDELVKLF ARARRRFQRGLKRKPMALIKKLRKA
Sbjct: 12  GAQPKKRTFRKFSYRGVDLDQLLDMGTDELVKLFHARARRRFQRGLKRKPMALIKKLRKA 71

Query: 181 KRDAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEXR 315
           KRDAP GEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVE +
Sbjct: 72  KRDAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 116



 Score =  150 bits (378), Expect = 5e-34
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +2

Query: 314 EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 493
           EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI
Sbjct: 82  EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 141

Query: 494 GATHSSRFIPLK 529
           GATHSSRFIPLK
Sbjct: 142 GATHSSRFIPLK 153


>gb|AFK41481.1| unknown [Lotus japonicus]
          Length = 153

 Score =  189 bits (481), Expect = 5e-46
 Identities = 93/105 (88%), Positives = 99/105 (94%)
 Frame = +1

Query: 1   GAAPKRRTFRKFAFRGVDLDQLLDMGTDELVKLFTARARRRFQRGLKRKPMALIKKLRKA 180
           G  PK+RTF+KF+FRGVDLD LLDM TDELVKLF+ARARRRFQRGL RKPMALIKKLRKA
Sbjct: 12  GGVPKKRTFKKFSFRGVDLDALLDMSTDELVKLFSARARRRFQRGLTRKPMALIKKLRKA 71

Query: 181 KRDAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEXR 315
           KR+APAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVE +
Sbjct: 72  KREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIK 116



 Score =  150 bits (378), Expect = 5e-34
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = +2

Query: 314 EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 493
           EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI
Sbjct: 82  EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 141

Query: 494 GATHSSRFIPLK 529
           GATHSSRFIPLK
Sbjct: 142 GATHSSRFIPLK 153


>ref|XP_002517015.1| 40S ribosomal protein S15, putative [Ricinus communis]
           gi|223543650|gb|EEF45178.1| 40S ribosomal protein S15,
           putative [Ricinus communis]
          Length = 151

 Score =  189 bits (479), Expect = 9e-46
 Identities = 92/102 (90%), Positives = 98/102 (96%)
 Frame = +1

Query: 10  PKRRTFRKFAFRGVDLDQLLDMGTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKRD 189
           PK+RTF+KF+FRGVDLD LLDM TDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKR+
Sbjct: 13  PKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKRE 72

Query: 190 APAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEXR 315
           AP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVE +
Sbjct: 73  APPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIK 114



 Score =  149 bits (377), Expect = 6e-34
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 314 EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 493
           EPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI
Sbjct: 80  EPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 139

Query: 494 GATHSSRFIPLK 529
           GATHSSRFIPLK
Sbjct: 140 GATHSSRFIPLK 151


>ref|XP_002520996.1| 40S ribosomal protein S15, putative [Ricinus communis]
           gi|223539833|gb|EEF41413.1| 40S ribosomal protein S15,
           putative [Ricinus communis]
          Length = 152

 Score =  189 bits (479), Expect = 9e-46
 Identities = 92/102 (90%), Positives = 98/102 (96%)
 Frame = +1

Query: 10  PKRRTFRKFAFRGVDLDQLLDMGTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKRD 189
           PK+RTF+KF+FRGVDLD LLDM TDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKR+
Sbjct: 14  PKKRTFKKFSFRGVDLDALLDMSTDELVKLFTARARRRFQRGLKRKPMALIKKLRKAKRE 73

Query: 190 APAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEXR 315
           AP GEKPEPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVE +
Sbjct: 74  APPGEKPEPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIK 115



 Score =  149 bits (377), Expect = 6e-34
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 314 EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 493
           EPVRTHLRNMIIVPEMIGS+IGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI
Sbjct: 81  EPVRTHLRNMIIVPEMIGSVIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 140

Query: 494 GATHSSRFIPLK 529
           GATHSSRFIPLK
Sbjct: 141 GATHSSRFIPLK 152


>sp|P31674.2|RS15_ORYSJ RecName: Full=40S ribosomal protein S15 gi|313103643|pdb|3IZ6|R
           Chain R, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|125557476|gb|EAZ03012.1|
           hypothetical protein OsI_25153 [Oryza sativa Indica
           Group] gi|222636560|gb|EEE66692.1| hypothetical protein
           OsJ_23352 [Oryza sativa Japonica Group]
          Length = 154

 Score =  188 bits (478), Expect = 1e-45
 Identities = 91/105 (86%), Positives = 100/105 (95%)
 Frame = +1

Query: 1   GAAPKRRTFRKFAFRGVDLDQLLDMGTDELVKLFTARARRRFQRGLKRKPMALIKKLRKA 180
           GA PK+RTFRK+++RGVDLD LLDM TD+LV+LF ARARRRFQRGLKRKPMALIKKLRKA
Sbjct: 13  GAQPKKRTFRKYSYRGVDLDALLDMSTDDLVQLFPARARRRFQRGLKRKPMALIKKLRKA 72

Query: 181 KRDAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEXR 315
           K+DAPAGEKPEPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVE +
Sbjct: 73  KKDAPAGEKPEPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIK 117



 Score =  149 bits (377), Expect = 6e-34
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = +2

Query: 314 EPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 493
           EPVRTHLRNMIIVPEMIGSI+GVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI
Sbjct: 83  EPVRTHLRNMIIVPEMIGSIVGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGI 142

Query: 494 GATHSSRFIPLK 529
           GATHSSRFIPLK
Sbjct: 143 GATHSSRFIPLK 154


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