BLASTX nr result

ID: Coptis21_contig00001458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001458
         (1535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [C...   503   e-140
ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|2...   491   e-136
ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like is...   470   e-130
ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [C...   455   e-125
ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis ...   454   e-125

>ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]
          Length = 356

 Score =  503 bits (1296), Expect = e-140
 Identities = 252/342 (73%), Positives = 281/342 (82%), Gaps = 2/342 (0%)
 Frame = -3

Query: 1320 KGNDGPTDATKRTSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFA 1141
            +GN   +   K+ SKKPKYSRFTQQELPACKPILTPGW               G+ASLFA
Sbjct: 16   QGNSDSSTPPKK-SKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFA 74

Query: 1140 SQQVVEIVERYDSDCISTSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHF 964
            S+QVVEIV++YD DC+ + F      FIK S TNKTC +KL V K MK PV+VYYQ+D+F
Sbjct: 75   SEQVVEIVDQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNF 134

Query: 963  YQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVK 787
            YQNHRRYVKSRSDKQLRSK  E  T TC PEA    G PIVPCGLIAWSLFNDTYGFS+K
Sbjct: 135  YQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMK 194

Query: 786  NKVLEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTA 607
            NK L+VSKK+IAWKSD+E KFGS+VYPKNFQS G+IGGAKLNAS PLS+Q+DLIVWMRTA
Sbjct: 195  NKALQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTA 254

Query: 606  ALPTFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAY 427
            ALPTFRKLYG IE D EAN+ ITVVI+NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAY
Sbjct: 255  ALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAY 314

Query: 426  LTVGGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGHFN 301
            L+VGGLCLFLA++FI++YV KPRPLGDPS+LSWNRN AG  N
Sbjct: 315  LSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 356


>ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  491 bits (1265), Expect = e-136
 Identities = 240/340 (70%), Positives = 274/340 (80%), Gaps = 2/340 (0%)
 Frame = -3

Query: 1314 NDGPTDATKRTSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFASQ 1135
            +D P   + + +KKP YSRFTQQELPACKPILTPGW               GLASL+AS+
Sbjct: 14   DDSPAAVSAKKNKKPNYSRFTQQELPACKPILTPGWVITSFIVVGVVFIPIGLASLYASE 73

Query: 1134 QVVEIVERYDSDCISTSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHFYQ 958
             VVEIVERYD DCI   + +    +I+ S+ NKTC   + V KHMKSPVF+YY++D+FYQ
Sbjct: 74   HVVEIVERYDKDCIPPDYRNNSLHYIQTSEINKTCTMTINVPKHMKSPVFIYYELDNFYQ 133

Query: 957  NHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVKNK 781
            NHRRYVKSRSDKQLRSK  E +T TC+PEA T+NG PIVPCGL+AWSLFNDTY FSVK +
Sbjct: 134  NHRRYVKSRSDKQLRSKASEGVTETCKPEAVTSNGQPIVPCGLVAWSLFNDTYRFSVKKE 193

Query: 780  VLEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTAAL 601
            VL+VSKKNIAWKSD+E KFGS+VYPKNFQS  +IGG KL++S PLSEQ DLIVWMRTAAL
Sbjct: 194  VLDVSKKNIAWKSDQEHKFGSDVYPKNFQSGSLIGGGKLDSSIPLSEQVDLIVWMRTAAL 253

Query: 600  PTFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLT 421
            P FRKLYG IE DL+AN TITV I+NNYNTYSFGGKKKLVLSTTSWIGGKN FLG AY+ 
Sbjct: 254  PNFRKLYGKIEKDLQANTTITVTIENNYNTYSFGGKKKLVLSTTSWIGGKNSFLGRAYIA 313

Query: 420  VGGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGHFN 301
            +GGLCLFLAV F+ VYV KPRPLGDPS+LSWNRNP+G  N
Sbjct: 314  IGGLCLFLAVCFVFVYVFKPRPLGDPSYLSWNRNPSGQMN 353


>ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like isoform 1 [Cucumis sativus]
            gi|449501692|ref|XP_004161439.1| PREDICTED:
            ALA-interacting subunit 5-like isoform 2 [Cucumis
            sativus]
          Length = 337

 Score =  470 bits (1210), Expect = e-130
 Identities = 237/323 (73%), Positives = 265/323 (82%), Gaps = 2/323 (0%)
 Frame = -3

Query: 1320 KGNDGPTDATKRTSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGLASLFA 1141
            +GN   +   K+ SKKPKYSRFTQQELPACKPILTPGW               G+ASLFA
Sbjct: 16   QGNSDSSTPPKK-SKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFA 74

Query: 1140 SQQVVEIVERYDSDCISTSFSDKE-DFIKRSDTNKTCIKKLLVHKHMKSPVFVYYQIDHF 964
            S+QVVEIV++YD DC+ + F      FIK S TNKTC +KL V K MK PV+VYYQ+D+F
Sbjct: 75   SEQVVEIVDQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNF 134

Query: 963  YQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNG-PIVPCGLIAWSLFNDTYGFSVK 787
            YQNHRRYVKSRSDKQLRSK  E  T TC PEA    G PIVPCGLIAWSLFNDTYGFS+K
Sbjct: 135  YQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMK 194

Query: 786  NKVLEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVWMRTA 607
            NK L+VSKK+IAWKSD+E KFGS+VYPKNFQS G+IGGAKLNAS PLS+Q+DLIVWMRTA
Sbjct: 195  NKALQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTA 254

Query: 606  ALPTFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAY 427
            ALPTFRKLYG IE D EAN+ ITVVI+NNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAY
Sbjct: 255  ALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAY 314

Query: 426  LTVGGLCLFLAVSFIIVYVAKPR 358
            L+VGGLCLFLA++FI++YV KPR
Sbjct: 315  LSVGGLCLFLAITFILLYVIKPR 337


>ref|XP_004139907.1| PREDICTED: ALA-interacting subunit 3-like [Cucumis sativus]
            gi|449475853|ref|XP_004154570.1| PREDICTED:
            ALA-interacting subunit 3-like [Cucumis sativus]
          Length = 343

 Score =  455 bits (1170), Expect = e-125
 Identities = 218/344 (63%), Positives = 263/344 (76%), Gaps = 1/344 (0%)
 Frame = -3

Query: 1335 MPPTPKGNDGPTDATKRTSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXXGL 1156
            M      +     + +R SK+PKYSRFTQQELPACKPILTP W               G+
Sbjct: 1    MSSNTASSSNDASSNRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVSIIFVPIGV 60

Query: 1155 ASLFASQQVVEIVERYDSDCISTSF-SDKEDFIKRSDTNKTCIKKLLVHKHMKSPVFVYY 979
            ASLFAS+ VVEI++RY+++CI   F SDK  FI+ +  NK C + + V K MK P++VYY
Sbjct: 61   ASLFASRDVVEIIDRYETECIPERFRSDKVGFIQGT-ANKICRRNITVPKRMKQPIYVYY 119

Query: 978  QIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNGPIVPCGLIAWSLFNDTYG 799
            Q+D+FYQNHRRYV+SRSDKQLR  G E  T++C+PE   N  P+VPCGLIAWSLFNDTY 
Sbjct: 120  QLDNFYQNHRRYVQSRSDKQLRDPGSERDTSSCKPEDNWNGQPVVPCGLIAWSLFNDTYN 179

Query: 798  FSVKNKVLEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLIVW 619
            F++  K + ++K  I+WKSD+E KFG NV+PKNFQ   + GG KLN S PLS+Q+DLIVW
Sbjct: 180  FTLNKKQVAINKVGISWKSDREHKFGKNVFPKNFQKGNITGGKKLNESVPLSQQEDLIVW 239

Query: 618  MRTAALPTFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKNDFL 439
            MRTAALPTFRKLYG IEVDLE N+ I VV++NNYNTYSF GKKKLVLSTTSW+GGKNDFL
Sbjct: 240  MRTAALPTFRKLYGKIEVDLEKNDVIDVVLENNYNTYSFNGKKKLVLSTTSWLGGKNDFL 299

Query: 438  GIAYLTVGGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGH 307
            GIAYLTVGGLC FLA++F +VY+ KPR LGDPS+LSWNRNP+GH
Sbjct: 300  GIAYLTVGGLCFFLAMAFTVVYLVKPRRLGDPSYLSWNRNPSGH 343


>ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera]
            gi|297736110|emb|CBI24148.3| unnamed protein product
            [Vitis vinifera]
          Length = 349

 Score =  454 bits (1169), Expect = e-125
 Identities = 223/346 (64%), Positives = 269/346 (77%), Gaps = 3/346 (0%)
 Frame = -3

Query: 1335 MPPTPKGNDGPTD--ATKRTSKKPKYSRFTQQELPACKPILTPGWXXXXXXXXXXXXXXX 1162
            +P +  G  G  D  A +R SK+PKYSRFTQQELPACKPILTP W               
Sbjct: 5    VPSSSSGAAGSADSSAPRRNSKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPI 64

Query: 1161 GLASLFASQQVVEIVERYDSDCISTSF-SDKEDFIKRSDTNKTCIKKLLVHKHMKSPVFV 985
            G+A+LFAS+ VVEIV+RY++DCI   F +DK ++I++   NK C + L V K MK P++V
Sbjct: 65   GVAALFASRDVVEIVDRYETDCIPEEFRNDKVNYIQKPG-NKPCNRTLTVPKKMKQPIYV 123

Query: 984  YYQIDHFYQNHRRYVKSRSDKQLRSKGYEDLTATCEPEAKTNNGPIVPCGLIAWSLFNDT 805
            YYQ+D+FYQNHRRYVKSR+D+QLRS    + T+ C+PE   N   IVPCGLIAWSLFNDT
Sbjct: 124  YYQLDNFYQNHRRYVKSRNDEQLRSGNSANETSDCKPEDYANGAVIVPCGLIAWSLFNDT 183

Query: 804  YGFSVKNKVLEVSKKNIAWKSDKESKFGSNVYPKNFQSSGVIGGAKLNASKPLSEQDDLI 625
            Y FS  N+ L ++KK I+WKSD+E KFG +VYPKNFQ+  +IGGA LN S PLSEQ+DLI
Sbjct: 184  YNFSRNNEQLSLNKKGISWKSDREHKFGKDVYPKNFQNGTLIGGATLNESIPLSEQEDLI 243

Query: 624  VWMRTAALPTFRKLYGHIEVDLEANETITVVIQNNYNTYSFGGKKKLVLSTTSWIGGKND 445
            VWMRTAALPTFRKLYG IEVDL+ N+TI V ++NNYNTYSF GKKKLVLSTTSW+GGKND
Sbjct: 244  VWMRTAALPTFRKLYGKIEVDLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKND 303

Query: 444  FLGIAYLTVGGLCLFLAVSFIIVYVAKPRPLGDPSFLSWNRNPAGH 307
            FLGIAYLTVGG+C+FLA++F +VY+ KPR LGDPS+LSWNRNP GH
Sbjct: 304  FLGIAYLTVGGICIFLAMAFTVVYLVKPRRLGDPSYLSWNRNPGGH 349


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