BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001452
         (3132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...  1288   0.0  
sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chlor...  1269   0.0  
ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...  1248   0.0  
ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|2...  1230   0.0  
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...  1227   0.0  

>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score = 1288 bits (3334), Expect = 0.0
 Identities = 668/912 (73%), Positives = 762/912 (83%), Gaps = 8/912 (0%)
 Frame = +3

Query: 183  MAFSTASSLLRYKLSFPVGSSFIGASRNLYVLSRGVRFFA-NAPRRSVKTVAAVNRRDGD 359
            MAFS ASSLLR++ S P           L+     +RF +  AP R    V A  R D +
Sbjct: 15   MAFSAASSLLRHQFSLP-----------LHHRLSYLRFLSVTAPPRKPHLVRARRRDDEE 63

Query: 360  GGEINGKVVLKDREINQGGRIVATELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRR 539
            G   NG +VLK+++  + GRIV TELHKEATEAYM+YAMSVLLGRALPDVRDGLKPVHRR
Sbjct: 64   G---NGSLVLKEKD-GRDGRIVPTELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRR 119

Query: 540  ILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRWPLIRGHG 719
            ILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR PLI+GHG
Sbjct: 120  ILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHG 179

Query: 720  NFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXQDTVDFLPNFDNSQKEPSLLPARVPNL 899
            NFGS+DADPPAAMRYTECR              QDTVDFLPNFDNSQKEPSLLPAR+P L
Sbjct: 180  NFGSVDADPPAAMRYTECRLEALTEAMLLADLEQDTVDFLPNFDNSQKEPSLLPARLPTL 239

Query: 900  LLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGLIMGN 1079
            LLNGSSGIAVGMATNIPPHN+GELVD L VLI NPEATLQELLEYMPGPDFPTGGLIMGN
Sbjct: 240  LLNGSSGIAVGMATNIPPHNIGELVDVLCVLIRNPEATLQELLEYMPGPDFPTGGLIMGN 299

Query: 1080 IGVLDAYXXXXXXXXXXXXXXXEVLDSKTKRTAVIIKEVPYQTNKAALVQKIAELVENKV 1259
            IG+L+AY               E+LDSKTKRTAVIIKE+PYQTNK++LV+KIAELVENK 
Sbjct: 300  IGILEAYRTGRGRIIVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSSLVEKIAELVENKS 359

Query: 1260 LEGVSDIRDESDRNGMRVVIELKRGSDPAIVLNKMYRLTTLQSSFNCNMVGILNGQPKLM 1439
            L+G+SDIRDESDR+GMR+VIELKRGSDP+IVLNK+YRLT LQSSF+CNM+GIL+GQPKLM
Sbjct: 360  LDGISDIRDESDRSGMRIVIELKRGSDPSIVLNKLYRLTALQSSFSCNMIGILDGQPKLM 419

Query: 1440 GLKELLTAFLDFRCSVIERRAKHKLSQAQERKHIVEGIIVGLGNVDGVIQIVRESSSNVV 1619
            GLKELL AFLDFRCSV+ERRA+ KLSQAQER+HIVEGI+VGL N+D VI++++E+ SN +
Sbjct: 420  GLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVVGLDNLDAVIRVIKEAPSNAM 479

Query: 1620 ASEALRNMYGLSERQAEAXXXXXXXXXXXXESKKFVDEGEALSEQISKLNELLSSKEQML 1799
            AS  LRN +GLSERQAEA            E +KFV E ++L EQISKL ELLSS++Q+L
Sbjct: 480  ASTGLRNEFGLSERQAEAILDISLRRITRLEREKFVTESKSLMEQISKLQELLSSRKQIL 539

Query: 1800 LLIEQEAIEVKNKFSTPRRSMLEEDESGQLDDIDVIPNEEMLLTLSEKGYLKRMKPSTFN 1979
             LIEQEAIE+KN+FSTPRRSMLE+ +SGQL+D+DVIPNEEMLL +SEKGY+KRMKP+TFN
Sbjct: 540  QLIEQEAIELKNRFSTPRRSMLEDTDSGQLEDVDVIPNEEMLLAVSEKGYVKRMKPNTFN 599

Query: 1980 LQNRGTIGKSVGKMRVNDAMSEFLVCRAHDHVLYFSDRGTVYSSRAYKVPECTRTAAGTP 2159
            LQNRGTIGKSVGK+RVNDAMS+F+VC AHD+VLYFSDRG V+S+RAYK+PECTRTAAGTP
Sbjct: 600  LQNRGTIGKSVGKLRVNDAMSDFIVCHAHDYVLYFSDRGIVHSARAYKIPECTRTAAGTP 659

Query: 2160 VVQILSLSDGERITSIIPVSEFSEEQYLVMLTVNGYIKKVSLKSFSAIRQTGIIAIQLVP 2339
            +VQIL LSDGERITSIIPVSEF+E+Q+L+MLT+NGYIKKVSL  FS+IR TGIIAIQLVP
Sbjct: 660  LVQILCLSDGERITSIIPVSEFAEDQFLLMLTMNGYIKKVSLNFFSSIRSTGIIAIQLVP 719

Query: 2340 GDELKWVRLCSNDDLVTMASQKGRAILSSCERVRALGRNTRGSIAMRLKEGDKVACMDII 2519
            GDELKWVR C+NDDLV MASQ G  ILSSCE +RALGRNTRGSIAMRLK+GDK+A MDII
Sbjct: 720  GDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRALGRNTRGSIAMRLKQGDKMASMDII 779

Query: 2520 PAAMHKDLEK-------QGKDLSAPWLLFVSESGYGKRVPLSYFNLSALNRIGLIGYKLQ 2678
            PAA+ KDLEK       + ++L+ PWLLFVSESG GKRVPLS F LS LNR+GLIGYK  
Sbjct: 780  PAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGLGKRVPLSRFRLSPLNRVGLIGYKFS 839

Query: 2679 EDDRLVAVYVVXXXXXXXXXXXXQLVLVSQSGTVNRIKVRDVSIQSRYAKGVILMRLEHA 2858
             +D L AV+VV            Q+VLVSQSGT+NRIKV D+SIQSR+A+GVILMRLE+A
Sbjct: 840  AEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTINRIKVWDISIQSRFARGVILMRLEYA 899

Query: 2859 GKIQSASLITAS 2894
            GKIQSASL++A+
Sbjct: 900  GKIQSASLMSAT 911


>sp|Q5YLB5.1|GYRA_NICBE RecName: Full=DNA gyrase subunit A, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017093|gb|AAR07942.1| DNA gyrase A
            subunit [Nicotiana benthamiana]
          Length = 935

 Score = 1269 bits (3283), Expect = 0.0
 Identities = 660/920 (71%), Positives = 749/920 (81%), Gaps = 14/920 (1%)
 Frame = +3

Query: 177  RDMAFSTASSLLRYKLSFPVGSSFIGASRNLYVLSRGVRFFANA---PRRSVKTVAAVNR 347
            + MAFST  +  R+                L   S  +RF ++    PR+ ++ V+A  +
Sbjct: 16   KPMAFSTGITPSRFS--------------GLRKTSSELRFLSSVTPPPRKQLRPVSARRK 61

Query: 348  RDGDGGEINGKVVLKDREINQ----GGRIVATELHKEATEAYMSYAMSVLLGRALPDVRD 515
             +  G E NG V+L+DR  N+    G R+V TELHKEATEAYMSYAMSVLLGRALPDVRD
Sbjct: 62   EEEVGDEGNGSVILRDRGENEDRNGGERVVLTELHKEATEAYMSYAMSVLLGRALPDVRD 121

Query: 516  GLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 695
            GLKPVHRRIL+AMHELGLSS+KPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR
Sbjct: 122  GLKPVHRRILYAMHELGLSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 181

Query: 696  WPLIRGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXQDTVDFLPNFDNSQKEPSL 875
             PLIRGHGNFGSIDADPPAAMRYTECR              Q+TVDF+PNFDNSQKEPSL
Sbjct: 182  SPLIRGHGNFGSIDADPPAAMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSL 241

Query: 876  LPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFP 1055
            LPARVPNLLLNG+SGIAVGMATNIPPHNLGELVDALS LIHNPEATLQELLEYMPGPDFP
Sbjct: 242  LPARVPNLLLNGASGIAVGMATNIPPHNLGELVDALSALIHNPEATLQELLEYMPGPDFP 301

Query: 1056 TGGLIMGNIGVLDAYXXXXXXXXXXXXXXXEVLDSKTKRTAVIIKEVPYQTNKAALVQKI 1235
            TGG+IMGNIG+L+A+               E+LDSKTKR A+II+E+PYQTNKA+LV+KI
Sbjct: 302  TGGIIMGNIGILEAFRTGRGRVVIRGKTDIELLDSKTKRAAIIIQEIPYQTNKASLVEKI 361

Query: 1236 AELVENKVLEGVSDIRDESDRNGMRVVIELKRGSDPAIVLNKMYRLTTLQSSFNCNMVGI 1415
            A+LVENK+LEGVSDIRDESDR+GMR+VIELKRGSDPAIVLN +YRLT LQSSF+CNMVGI
Sbjct: 362  ADLVENKILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTALQSSFSCNMVGI 421

Query: 1416 LNGQPKLMGLKELLTAFLDFRCSVIERRAKHKLSQAQERKHIVEGIIVGLGNVDGVIQIV 1595
            LNGQPKLMGLKELL AFLDFRCSV+ERRA+ KLSQAQER HIVEGIIVGL N+D VI  +
Sbjct: 422  LNGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERNHIVEGIIVGLDNLDEVINTI 481

Query: 1596 RESSSNVVASEALRNMYGLSERQAEAXXXXXXXXXXXXESKKFVDEGEALSEQISKLNEL 1775
            R++SSN +A+ +LR  + LSE+QAEA            E  KFV+EG++L  QISKL EL
Sbjct: 482  RKASSNALAAASLRKEFELSEKQAEAILDISLRRLTALERNKFVEEGKSLRTQISKLEEL 541

Query: 1776 LSSKEQMLLLIEQEAIEVKNKFSTPRRSMLEEDESGQLDDIDVIPNEEMLLTLSEKGYLK 1955
            LSSK+Q+L LIE+EAIE+KNKF  PRRSMLE+ +SG L+DIDVIPNEEMLL +SEKGY+K
Sbjct: 542  LSSKKQILQLIEEEAIEIKNKFFNPRRSMLEDTDSGDLEDIDVIPNEEMLLAISEKGYVK 601

Query: 1956 RMKPSTFNLQNRGTIGKSVGKMRVNDAMSEFLVCRAHDHVLYFSDRGTVYSSRAYKVPEC 2135
            RMKP TFNLQNRGTIGKSVGK+RVNDAMS+FLVCRAHD VLYFSD+GTVYSS AYK+PEC
Sbjct: 602  RMKPDTFNLQNRGTIGKSVGKLRVNDAMSDFLVCRAHDKVLYFSDKGTVYSSPAYKIPEC 661

Query: 2136 TRTAAGTPVVQILSLSDGERITSIIPVSEFSEEQYLVMLTVNGYIKKVSLKSFSAIRQTG 2315
            +RTAAGTP+VQILSLSDGERITSIIPVSEF+ +QYLVMLTVNGYIKKVSL  F++IR TG
Sbjct: 662  SRTAAGTPLVQILSLSDGERITSIIPVSEFAADQYLVMLTVNGYIKKVSLNYFASIRCTG 721

Query: 2316 IIAIQLVPGDELKWVRLCSNDDLVTMASQKGRAILSSCERVRALGRNTRGSIAMRLKEGD 2495
            IIAIQLVP DELKWV+ CSN+D V MASQ G  IL+ C  +RALGRNTRGS+AMRLKEGD
Sbjct: 722  IIAIQLVPDDELKWVKCCSNNDFVAMASQNGMVILTPCANIRALGRNTRGSVAMRLKEGD 781

Query: 2496 KVACMDIIPAAMHKDLEK-------QGKDLSAPWLLFVSESGYGKRVPLSYFNLSALNRI 2654
            KVA MDIIP A+ K+L+K       Q + +  PWLLFVSESGYGKRVP+S F  S LNR+
Sbjct: 782  KVASMDIIPDALQKELDKTLEVQQRQYRSMKGPWLLFVSESGYGKRVPVSRFRTSPLNRV 841

Query: 2655 GLIGYKLQEDDRLVAVYVVXXXXXXXXXXXXQLVLVSQSGTVNRIKVRDVSIQSRYAKGV 2834
            GL GYK   +D L AV+VV            Q+VLVSQSGTVNRIKVRD+SIQSRYA+GV
Sbjct: 842  GLFGYKFSSEDCLAAVFVVGFSLGEDGESDEQVVLVSQSGTVNRIKVRDISIQSRYARGV 901

Query: 2835 ILMRLEHAGKIQSASLITAS 2894
            ILMRLEHAGKIQSASLI+A+
Sbjct: 902  ILMRLEHAGKIQSASLISAA 921


>ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 924

 Score = 1248 bits (3230), Expect = 0.0
 Identities = 634/873 (72%), Positives = 724/873 (82%), Gaps = 8/873 (0%)
 Frame = +3

Query: 300  ANAPRRSVKTVAAVNRRDGDGGEINGKV-VLKDREINQGGRIVATELHKEATEAYMSYAM 476
            A APRR      +  RRD + G +        D      GR+V TELHKEATEAYM+YAM
Sbjct: 39   ARAPRRPASAFRSARRRDDENGSVTTAASATTDNGYVSEGRVVPTELHKEATEAYMAYAM 98

Query: 477  SVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVY 656
            SVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KP+KKCARVVGEVLGKFHPHGDTAVY
Sbjct: 99   SVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGKFHPHGDTAVY 158

Query: 657  DSLVRMAQDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXQDTVDF 836
            DSLVRMAQDFSLR PLI+GHGNFGSIDADPPAAMRYTECR              QDTVDF
Sbjct: 159  DSLVRMAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLDDLTEAMLLTDLEQDTVDF 218

Query: 837  LPNFDNSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATL 1016
            +PNFDNSQKEPSLLPAR+P LLLNGSSGIAVGMATNIPPHNLGE+VD L VLIHNPEATL
Sbjct: 219  VPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDVLCVLIHNPEATL 278

Query: 1017 QELLEYMPGPDFPTGGLIMGNIGVLDAYXXXXXXXXXXXXXXXEVLDSKTKRTAVIIKEV 1196
            QELLEYMPGPDFPTGGLIMGN+G+L+AY               E+LDSKTKRTA+IIKE+
Sbjct: 279  QELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRVIIRGKTDIELLDSKTKRTAIIIKEI 338

Query: 1197 PYQTNKAALVQKIAELVENKVLEGVSDIRDESDRNGMRVVIELKRGSDPAIVLNKMYRLT 1376
            PYQTNKA LV+KIAELVENK L+G+SDIRDESDR+GMR+VIELKRGSDP IVLN +YRLT
Sbjct: 339  PYQTNKATLVEKIAELVENKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLT 398

Query: 1377 TLQSSFNCNMVGILNGQPKLMGLKELLTAFLDFRCSVIERRAKHKLSQAQERKHIVEGII 1556
            +LQS+F+CNMVGILNGQPK MGLKELL AFLDFRCSV+ERRA+ KLSQAQER+HIVEGI+
Sbjct: 399  SLQSTFSCNMVGILNGQPKQMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIL 458

Query: 1557 VGLGNVDGVIQIVRESSSNVVASEALRNMYGLSERQAEAXXXXXXXXXXXXESKKFVDEG 1736
            +G  N+DGVI+I+RE+SSN  A+  LRN + LSE+QAEA            ES  FV E 
Sbjct: 459  IGFDNLDGVIRIIREASSNSAAAAGLRNAFSLSEKQAEALLDISLRRLSLRESGNFVAES 518

Query: 1737 EALSEQISKLNELLSSKEQMLLLIEQEAIEVKNKFSTPRRSMLEEDESGQLDDIDVIPNE 1916
            ++L EQISKL ELLSS++ +L LIEQEAIE+K+KFS PRRSMLE+ ++GQL+DIDVIPNE
Sbjct: 519  KSLMEQISKLEELLSSRKNILELIEQEAIELKSKFSNPRRSMLEDTDNGQLEDIDVIPNE 578

Query: 1917 EMLLTLSEKGYLKRMKPSTFNLQNRGTIGKSVGKMRVNDAMSEFLVCRAHDHVLYFSDRG 2096
            EM+L LSEKGY+KRMKPSTFNLQNRGTIGKSVGK++VND+MS+FLVC AHDHVLYFSD+G
Sbjct: 579  EMILALSEKGYMKRMKPSTFNLQNRGTIGKSVGKLKVNDSMSDFLVCHAHDHVLYFSDKG 638

Query: 2097 TVYSSRAYKVPECTRTAAGTPVVQILSLSDGERITSIIPVSEFSEEQYLVMLTVNGYIKK 2276
            TVYS+RAYK+PEC+RTAAGTP+VQILSLSDGERITSIIPVSEF+E+Q+L+MLT+ GYIK+
Sbjct: 639  TVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSIIPVSEFAEDQFLLMLTMQGYIKR 698

Query: 2277 VSLKSFSAIRQTGIIAIQLVPGDELKWVRLCSNDDLVTMASQKGRAILSSCERVRALGRN 2456
            VSL  FS+IR  GIIAIQLVPGDELKWVRLCSNDD V MAS  G  +LS C ++R L RN
Sbjct: 699  VSLNLFSSIRSIGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLSQCSKIRTLSRN 758

Query: 2457 TRGSIAMRLKEGDKVACMDIIPAAMHKDLEK-------QGKDLSAPWLLFVSESGYGKRV 2615
            TRG+ AMRLK+GDK+A +DIIPAAM  +LE          K  + PWLLFVSE+GYGKRV
Sbjct: 759  TRGAPAMRLKKGDKMASVDIIPAAMWNNLETTSKFPGINAKSQNGPWLLFVSENGYGKRV 818

Query: 2616 PLSYFNLSALNRIGLIGYKLQEDDRLVAVYVVXXXXXXXXXXXXQLVLVSQSGTVNRIKV 2795
            PLS F +S+LNR+GLIGYK   +DRL AV+VV            Q+VLVSQSGTVNRIKV
Sbjct: 819  PLSSFRISSLNRVGLIGYKFSAEDRLAAVFVVGFSSAEDGESDEQVVLVSQSGTVNRIKV 878

Query: 2796 RDVSIQSRYAKGVILMRLEHAGKIQSASLITAS 2894
            RD+SIQSR+A+GVILMRL+H+GKIQSASLI+A+
Sbjct: 879  RDISIQSRFARGVILMRLDHSGKIQSASLISAT 911


>ref|XP_002315402.1| predicted protein [Populus trichocarpa] gi|222864442|gb|EEF01573.1|
            predicted protein [Populus trichocarpa]
          Length = 932

 Score = 1230 bits (3182), Expect = 0.0
 Identities = 631/882 (71%), Positives = 725/882 (82%), Gaps = 13/882 (1%)
 Frame = +3

Query: 288  VRFFANAPRRSVKTVAAVNRRDG---DGGEINGKVVLKDREINQ----GGRIVATELHKE 446
            +RF +++PR  ++ V    RR+    D  E NG +++KD          GR+V TELHKE
Sbjct: 35   LRFSSSSPR--IRPVVQSRRREEPATDDSE-NGSLLVKDPNGGSPGGGNGRVVQTELHKE 91

Query: 447  ATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPYKKCARVVGEVLGK 626
            ATEAYM+YAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSS+KP+KKCARVVGEVLGK
Sbjct: 92   ATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSKKPFKKCARVVGEVLGK 151

Query: 627  FHPHGDTAVYDSLVRMAQDFSLRWPLIRGHGNFGSIDADPPAAMRYTECRXXXXXXXXXX 806
            FHPHGDTAVYD+LVRMAQDFSLR PLI+GHGNFGS+DADPPAAMRYTECR          
Sbjct: 152  FHPHGDTAVYDALVRMAQDFSLRCPLIQGHGNFGSVDADPPAAMRYTECRLDGLTEAVFL 211

Query: 807  XXXXQDTVDFLPNFDNSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDALS 986
                QDTVDF+PNFDNSQKEPSL P R+P LLLNGSSGIAVGMAT IPPHNLGELVD L 
Sbjct: 212  ADLEQDTVDFVPNFDNSQKEPSLFPTRLPTLLLNGSSGIAVGMATKIPPHNLGELVDVLC 271

Query: 987  VLIHNPEATLQELLEYMPGPDFPTGGLIMGNIGVLDAYXXXXXXXXXXXXXXXEVLDSKT 1166
             LIHNPEATLQELLEYMPGPDFPTGG+IMGN G+LDAY               E+LDSKT
Sbjct: 272  ALIHNPEATLQELLEYMPGPDFPTGGIIMGNQGILDAYRSGQGRIVVRGKTDVELLDSKT 331

Query: 1167 KRTAVIIKEVPYQTNKAALVQKIAELVENKVLEGVSDIRDESDRNGMRVVIELKRGSDPA 1346
            KR AVIIKE+PYQTNKA+LV+KIAELVE+K L+G+SDIRDESDR+GMR+VIELKRG+DP+
Sbjct: 332  KRNAVIIKEIPYQTNKASLVEKIAELVEDKNLDGISDIRDESDRSGMRIVIELKRGADPS 391

Query: 1347 IVLNKMYRLTTLQSSFNCNMVGILNGQPKLMGLKELLTAFLDFRCSVIERRAKHKLSQAQ 1526
            IVLN +YRLT LQSSF+CNMVGIL+GQPK MGLKELL AFLDFRCSV+ERRA  KLS+AQ
Sbjct: 392  IVLNNLYRLTPLQSSFSCNMVGILDGQPKQMGLKELLQAFLDFRCSVVERRAMFKLSEAQ 451

Query: 1527 ERKHIVEGIIVGLGNVDGVIQIVRESSSNVVASEALRNMYGLSERQAEAXXXXXXXXXXX 1706
            +R+HIVEG++ GL N+D V+ I+R++SSN +AS  LRN + LSE+QAEA           
Sbjct: 452  KRRHIVEGVMAGLDNLDRVVDIIRKASSNAIASADLRNEFSLSEKQAEAILDISLRRLTL 511

Query: 1707 XESKKFVDEGEALSEQISKLNELLSSKEQMLLLIEQEAIEVKNKFSTPRRSMLEEDESGQ 1886
             E KKFV+E ++L EQI+KL ELLSS+  +L LIEQEA+E+KNKFS PRRSMLE+ +SGQ
Sbjct: 512  LEGKKFVEESKSLMEQITKLEELLSSRGNILQLIEQEAVELKNKFSNPRRSMLEDSDSGQ 571

Query: 1887 LDDIDVIPNEEMLLTLSEKGYLKRMKPSTFNLQNRGTIGKSVGKMRVNDAMSEFLVCRAH 2066
            L+DIDVIPNEEMLL +SEKGY+KRMKP+TFNLQNRGTIGKSVGK+R +DAMS+F+VC AH
Sbjct: 572  LEDIDVIPNEEMLLAISEKGYVKRMKPNTFNLQNRGTIGKSVGKLRDSDAMSDFIVCHAH 631

Query: 2067 DHVLYFSDRGTVYSSRAYKVPECTRTAAGTPVVQILSLSDGERITSIIPVSEFSEEQYLV 2246
            D VLYFSD+G VYS+ AYK+PECTR AAGTP++Q LSLSDGERITSIIPVSEF E+Q+L+
Sbjct: 632  DRVLYFSDQGIVYSAPAYKIPECTRAAAGTPLIQFLSLSDGERITSIIPVSEFVEDQFLL 691

Query: 2247 MLTVNGYIKKVSLKSFSAIRQTGIIAIQLVPGDELKWVRLCSNDDLVTMASQKGRAILSS 2426
            MLTVNGYIKKVSL SFSAIR TGIIAIQLVPGDELKWVR C+N DLV MASQ G  IL+S
Sbjct: 692  MLTVNGYIKKVSLNSFSAIRSTGIIAIQLVPGDELKWVRCCTNGDLVAMASQNGMVILTS 751

Query: 2427 CERVRALGRNTRGSIAMRLKEGDKVACMDIIPAAMHKDLEKQGKDL------SAPWLLFV 2588
            CE +RALGRNTRG +AMRL+EGDK+A MDIIPA++ KDLE   KD       + PWLLFV
Sbjct: 752  CENIRALGRNTRGGVAMRLREGDKIASMDIIPASLQKDLEVASKDSENNNKGTGPWLLFV 811

Query: 2589 SESGYGKRVPLSYFNLSALNRIGLIGYKLQEDDRLVAVYVVXXXXXXXXXXXXQLVLVSQ 2768
            SESG+GKRVPLS F  S LNR+GLIGYK  E+D L AV+ V            Q+VLVSQ
Sbjct: 812  SESGHGKRVPLSSFKQSRLNRVGLIGYKFFEEDHLAAVFAVGFSLTEDGESDEQVVLVSQ 871

Query: 2769 SGTVNRIKVRDVSIQSRYAKGVILMRLEHAGKIQSASLITAS 2894
            SGTVNRIKVRD+SIQSR+A+GVILMRLEHAGKIQS SLI+A+
Sbjct: 872  SGTVNRIKVRDISIQSRFARGVILMRLEHAGKIQSTSLISAA 913


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score = 1227 bits (3175), Expect = 0.0
 Identities = 641/909 (70%), Positives = 739/909 (81%), Gaps = 11/909 (1%)
 Frame = +3

Query: 201  SSLLRYKLSFPVGSSFIGASRNLYVLSRGVRFFA---NAPRRSVKTVAAVNRRD------ 353
            S LLR++L+ P+ S+    +R    LS  +RF +   +   RS++ +A   RRD      
Sbjct: 10   SYLLRHQLAPPLVSNRF--TRTCLGLSE-LRFLSTKNSTASRSLR-LAKSGRRDEPVKDE 65

Query: 354  -GDGGEINGKVVLKDREINQGGRIVATELHKEATEAYMSYAMSVLLGRALPDVRDGLKPV 530
              DG + NG V +K       GRIV T LHKEAT+AYM+YAMSVLLGRALPDVRDGLKPV
Sbjct: 66   GDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRDGLKPV 125

Query: 531  HRRILFAMHELGLSSRKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRWPLIR 710
            HRRILFAMHELGLSSRKP+KKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLR PLI+
Sbjct: 126  HRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRSPLIQ 185

Query: 711  GHGNFGSIDADPPAAMRYTECRXXXXXXXXXXXXXXQDTVDFLPNFDNSQKEPSLLPARV 890
            GHGNFGSIDADPPAAMRYTECR               +TVDF+PNFDNSQKEPSLLPAR+
Sbjct: 186  GHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSLLPARL 245

Query: 891  PNLLLNGSSGIAVGMATNIPPHNLGELVDALSVLIHNPEATLQELLEYMPGPDFPTGGLI 1070
            P LLLNGSSGIAVGMATNIPPHNLGE+VDAL VLIHNPEATLQELLEYMPGPDFPTGGLI
Sbjct: 246  PTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFPTGGLI 305

Query: 1071 MGNIGVLDAYXXXXXXXXXXXXXXXEVLDSKTKRTAVIIKEVPYQTNKAALVQKIAELVE 1250
            MGN G+L+AY               E+LDSKTKRTAVIIKE+PYQTNK+ALV++IAELVE
Sbjct: 306  MGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVERIAELVE 365

Query: 1251 NKVLEGVSDIRDESDRNGMRVVIELKRGSDPAIVLNKMYRLTTLQSSFNCNMVGILNGQP 1430
            NK L+G+SDIRDESDR GMR+VIELKRG+DP+IV N +YRLT+LQSSF+CNMVGI+NGQP
Sbjct: 366  NKTLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTSLQSSFSCNMVGIINGQP 425

Query: 1431 KLMGLKELLTAFLDFRCSVIERRAKHKLSQAQERKHIVEGIIVGLGNVDGVIQIVRESSS 1610
            KLMGLKELL AFLDFRCSV+ERRA+ KL  AQER+HIVEGI++GL N+DGVI+++RE+SS
Sbjct: 426  KLMGLKELLQAFLDFRCSVVERRARFKLLHAQERRHIVEGIVIGLDNLDGVIRLIREASS 485

Query: 1611 NVVASEALRNMYGLSERQAEAXXXXXXXXXXXXESKKFVDEGEALSEQISKLNELLSSKE 1790
            + +AS +LR  + LSE+QAEA            E KKF+DE ++L E ISKL ELLSS+ 
Sbjct: 486  HSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFIDESKSLMENISKLEELLSSRN 545

Query: 1791 QMLLLIEQEAIEVKNKFSTPRRSMLEEDESGQLDDIDVIPNEEMLLTLSEKGYLKRMKPS 1970
             +L LIEQEA E+K+KF  PRRS+LE+ +SGQ++DIDVIPNEEMLL  SEKGY+KRMKP+
Sbjct: 546  NILQLIEQEATELKDKFPNPRRSVLEDTDSGQVEDIDVIPNEEMLLAFSEKGYVKRMKPN 605

Query: 1971 TFNLQNRGTIGKSVGKMRVNDAMSEFLVCRAHDHVLYFSDRGTVYSSRAYKVPECTRTAA 2150
            TFNLQ+RGTIGKSVGK+RVNDAMS+F+VCRAHDHVLYFSD+G VYS+RAYK+PEC RTAA
Sbjct: 606  TFNLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYKIPECGRTAA 665

Query: 2151 GTPVVQILSLSDGERITSIIPVSEFSEEQYLVMLTVNGYIKKVSLKSFSAIRQTGIIAIQ 2330
            GTP+VQ+LSLSDGERITSIIPVSEF  +Q+L+MLT  GYIKKVSL  FS+IR TGIIAIQ
Sbjct: 666  GTPLVQVLSLSDGERITSIIPVSEFEGDQFLLMLTAYGYIKKVSLNFFSSIRSTGIIAIQ 725

Query: 2331 LVPGDELKWVRLCSNDDLVTMASQKGRAILSSCERVRALGRNTRGSIAMRLKEGDKVACM 2510
            LV GDELKWVR C+ND+LV MASQ G  ILSSC+ +RALGRNTRGS+AM+LK GDK+A M
Sbjct: 726  LVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRALGRNTRGSVAMKLKTGDKMASM 785

Query: 2511 DIIPAAMHKDLEK-QGKDLSAPWLLFVSESGYGKRVPLSYFNLSALNRIGLIGYKLQEDD 2687
            DIIPAA+  DLE+   K  + PWLLFVSESG GKRVPL  F LS L R+GLIG K    D
Sbjct: 786  DIIPAAVWNDLERNSSKSSNGPWLLFVSESGVGKRVPLKSFRLSPLRRVGLIGCKFSSQD 845

Query: 2688 RLVAVYVVXXXXXXXXXXXXQLVLVSQSGTVNRIKVRDVSIQSRYAKGVILMRLEHAGKI 2867
            RL AV+VV            Q+VLVSQSGTVNRIKVRDVSIQSR+A+GVILMRL+HAGKI
Sbjct: 846  RLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLDHAGKI 905

Query: 2868 QSASLITAS 2894
            QSASLI+A+
Sbjct: 906  QSASLISAA 914