BLASTX nr result

ID: Coptis21_contig00001448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001448
         (2085 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]           84   1e-13
gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]        83   3e-13
ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...    82   4e-13
ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Sela...    82   4e-13
ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Sela...    82   4e-13

>gb|ABU45194.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 557

 Score = 84.0 bits (206), Expect = 1e-13
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 2/122 (1%)
 Frame = -1

Query: 882 SGKEGVCETMPRTDGTSQFKGIARRVYVGGLPPETDKQEITTLFRQMLNSMKGSD-NPA- 709
           SG+ G    MP    T Q    ARRVYVGGLPP  ++Q + T F  ++ ++ G+   P  
Sbjct: 203 SGQFGALPVMPIQAMTQQATRHARRVYVGGLPPSANEQSVATFFSHVMYAIGGNTAGPGD 262

Query: 708 AVMNAYTNKKKNYGILELNSVEEASIALEMKDVCIEGSRLSIRRADDYNRKFKVDVETNY 529
           AV+N Y N +K +  +E+ SVEEAS A+ +  V  EG  + +RR  DYN      +  + 
Sbjct: 263 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGVIFEGGPVKVRRPSDYNPSLAATLGPSQ 322

Query: 528 PS 523
           PS
Sbjct: 323 PS 324


>gb|AEI98617.1| hypothetical protein 111O18.4 [Coffea canephora]
          Length = 570

 Score = 82.8 bits (203), Expect = 3e-13
 Identities = 45/125 (36%), Positives = 70/125 (56%), Gaps = 2/125 (1%)
 Frame = -1

Query: 891 SCGSGKEGVCETMPRTDGTSQFKGIARRVYVGGLPPETDKQEITTLFRQMLNSMKGSD-N 715
           S  +G+ G    MP    T Q    ARRVYVGGLPP  ++Q + T F  +++++ G+   
Sbjct: 211 SLPTGQLGALPVMPVQAMTQQATRHARRVYVGGLPPTANEQSVATFFSHVMSAIGGNTAG 270

Query: 714 PA-AVMNAYTNKKKNYGILELNSVEEASIALEMKDVCIEGSRLSIRRADDYNRKFKVDVE 538
           P  AV+N Y N +K +  +E+ SVEEAS A+ +  +  EG+ + +RR  DYN      + 
Sbjct: 271 PGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLG 330

Query: 537 TNYPS 523
            + P+
Sbjct: 331 PSQPN 335


>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis
           vinifera]
          Length = 568

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 45/122 (36%), Positives = 69/122 (56%), Gaps = 2/122 (1%)
 Frame = -1

Query: 882 SGKEGVCETMPRTDGTSQFKGIARRVYVGGLPPETDKQEITTLFRQMLNSMKGSD-NPA- 709
           SG+ G    MP    T Q    ARRVYVGGL P  ++Q + T F Q+++++ G+   P  
Sbjct: 211 SGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQSVATFFSQVMSAIGGNTAGPGD 270

Query: 708 AVMNAYTNKKKNYGILELNSVEEASIALEMKDVCIEGSRLSIRRADDYNRKFKVDVETNY 529
           AV+N Y N +K +  +E+ SVEEAS A+ +  +  EG+ + +RR  DYN      +  + 
Sbjct: 271 AVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAPVKVRRPSDYNPSLAATLGPSQ 330

Query: 528 PS 523
           P+
Sbjct: 331 PN 332


>ref|XP_002989707.1| hypothetical protein SELMODRAFT_160385 [Selaginella moellendorffii]
           gi|300142484|gb|EFJ09184.1| hypothetical protein
           SELMODRAFT_160385 [Selaginella moellendorffii]
          Length = 421

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
 Frame = -1

Query: 858 TMPRTDGTSQFKGIARRVYVGGLPPETDKQEITTLFRQMLNSMKGSD-NPA-AVMNAYTN 685
           TMP    T Q    ARRVYVGGLPP  ++Q I T F Q+++++ G+   P  AV+N Y N
Sbjct: 48  TMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIGGNTAGPGDAVVNVYIN 107

Query: 684 KKKNYGILELNSVEEASIALEMKDVCIEGSRLSIRRADDYNRKFKVDVETNYPS 523
           ++K +  +E+ +VEEAS A+ +  +  EG  + +RR  DYN      +  + PS
Sbjct: 108 QEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPS 161


>ref|XP_002991774.1| hypothetical protein SELMODRAFT_161898 [Selaginella moellendorffii]
           gi|300140455|gb|EFJ07178.1| hypothetical protein
           SELMODRAFT_161898 [Selaginella moellendorffii]
          Length = 420

 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 45/114 (39%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
 Frame = -1

Query: 858 TMPRTDGTSQFKGIARRVYVGGLPPETDKQEITTLFRQMLNSMKGSD-NPA-AVMNAYTN 685
           TMP    T Q    ARRVYVGGLPP  ++Q I T F Q+++++ G+   P  AV+N Y N
Sbjct: 48  TMPAQAMTQQATRHARRVYVGGLPPLANEQTIATFFSQVMSAIGGNTAGPGDAVVNVYIN 107

Query: 684 KKKNYGILELNSVEEASIALEMKDVCIEGSRLSIRRADDYNRKFKVDVETNYPS 523
           ++K +  +E+ +VEEAS A+ +  +  EG  + +RR  DYN      +  + PS
Sbjct: 108 QEKKFAFVEMRTVEEASNAMALDGIIFEGVSVRVRRPSDYNPSMAATLGPSQPS 161


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