BLASTX nr result

ID: Coptis21_contig00001427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001427
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319077.1| predicted protein [Populus trichocarpa] gi|1...   212   2e-53
ref|XP_002319078.1| predicted protein [Populus trichocarpa] gi|2...   205   3e-51
ref|XP_002328493.1| predicted protein [Populus trichocarpa] gi|2...   191   5e-47
gb|ABK63195.1| hevein-like [Populus tremula x Populus alba]           191   5e-47
ref|XP_002319076.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46

>ref|XP_002319077.1| predicted protein [Populus trichocarpa] gi|118487978|gb|ABK95810.1|
           unknown [Populus trichocarpa]
           gi|222857453|gb|EEE95000.1| predicted protein [Populus
           trichocarpa]
          Length = 196

 Score =  212 bits (540), Expect = 2e-53
 Identities = 96/135 (71%), Positives = 106/135 (78%), Gaps = 2/135 (1%)
 Frame = +1

Query: 55  MGNTSLYMVFLLCLIGGAVAQNCGRQAGGRTCPGNICCSQWGWCGTSNDHC--TNNCQSN 228
           M   SL+MVFLLCL   A+AQNCGRQAGG+TC  N+CCSQWG+CGTS+DHC  + NCQSN
Sbjct: 1   MKRLSLFMVFLLCLAATAIAQNCGRQAGGQTCANNLCCSQWGYCGTSDDHCNPSKNCQSN 60

Query: 229 CRXXXXXXXXXXXXXXXESASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQ 408
           CR               ESASNVRATYH YNP QNGWDLN VSAYC+TWDANKPLAWR++
Sbjct: 61  CRSSGSGGGTGGGG---ESASNVRATYHYYNPDQNGWDLNAVSAYCSTWDANKPLAWRRK 117

Query: 409 YGWTAFCGPVGPRGQ 453
           YGWTAFCGPVGPRGQ
Sbjct: 118 YGWTAFCGPVGPRGQ 132


>ref|XP_002319078.1| predicted protein [Populus trichocarpa] gi|222857454|gb|EEE95001.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  205 bits (522), Expect = 3e-51
 Identities = 92/135 (68%), Positives = 104/135 (77%), Gaps = 2/135 (1%)
 Frame = +1

Query: 55  MGNTSLYMVFLLCLIGGAVAQNCGRQAGGRTCPGNICCSQWGWCGTSNDHC--TNNCQSN 228
           M   SL++VFLLCL+  A+AQNCGRQAGG+TC  N+CCSQWG+CGTS+DHC  + NCQSN
Sbjct: 1   MQRLSLFVVFLLCLVATAIAQNCGRQAGGQTCANNLCCSQWGFCGTSDDHCNPSKNCQSN 60

Query: 229 CRXXXXXXXXXXXXXXXESASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQ 408
           C                ESASNVRATYH YNP QNGWDLN VSAYC+TWDANKPL WR++
Sbjct: 61  CSPGTGAG---------ESASNVRATYHYYNPDQNGWDLNAVSAYCSTWDANKPLEWRRK 111

Query: 409 YGWTAFCGPVGPRGQ 453
           YGWTAFCGPVGP GQ
Sbjct: 112 YGWTAFCGPVGPSGQ 126


>ref|XP_002328493.1| predicted protein [Populus trichocarpa] gi|222838208|gb|EEE76573.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  191 bits (485), Expect = 5e-47
 Identities = 87/130 (66%), Positives = 98/130 (75%), Gaps = 4/130 (3%)
 Frame = +1

Query: 76  MVFLLCLIGGAVAQNCGRQA-GGRTCPGNICCSQWGWCGTSNDHCT--NNCQSNCRXXXX 246
           ++ LLCL+G A  +  GRQA GGRTC  N+CCS+WG+CGTS+DHC+   NCQSNCR    
Sbjct: 4   LIVLLCLMGDAFGEQYGRQAAGGRTCANNLCCSEWGFCGTSDDHCSPSKNCQSNCRPSGG 63

Query: 247 XXXXXXXXXXX-ESASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTA 423
                       ESASNVRATYH YNP QNGWDLN V AYC+TWDANKPLAWR+QYGWTA
Sbjct: 64  GGGGGGGSSGGCESASNVRATYHFYNPEQNGWDLNAVRAYCSTWDANKPLAWRRQYGWTA 123

Query: 424 FCGPVGPRGQ 453
           FCGPVGPRGQ
Sbjct: 124 FCGPVGPRGQ 133


>gb|ABK63195.1| hevein-like [Populus tremula x Populus alba]
          Length = 205

 Score =  191 bits (485), Expect = 5e-47
 Identities = 80/129 (62%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
 Frame = +1

Query: 73  YMVFLLCLIGGAVAQNCGRQAGGRTCPGNICCSQWGWCGTSNDHCT--NNCQSNCRXXXX 246
           +++ LLCLIGGA  + CG+QAGG+TCP N+CCSQ+GWCG ++D+C+   NCQSNC+    
Sbjct: 8   FLIVLLCLIGGAAGEQCGKQAGGQTCPNNLCCSQYGWCGDTDDYCSPSKNCQSNCKGGGG 67

Query: 247 XXXXXXXXXXXESASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAF 426
                      ESASNVRATYH+YNP  +GWDLN VSAYC+TWDA+KP +WR +YGWTAF
Sbjct: 68  G----------ESASNVRATYHLYNPQDHGWDLNAVSAYCSTWDASKPYSWRSKYGWTAF 117

Query: 427 CGPVGPRGQ 453
           CGP GPRGQ
Sbjct: 118 CGPAGPRGQ 126


>ref|XP_002319076.1| predicted protein [Populus trichocarpa] gi|222857452|gb|EEE94999.1|
           predicted protein [Populus trichocarpa]
          Length = 204

 Score =  188 bits (478), Expect = 3e-46
 Identities = 79/129 (61%), Positives = 97/129 (75%), Gaps = 2/129 (1%)
 Frame = +1

Query: 73  YMVFLLCLIGGAVAQNCGRQAGGRTCPGNICCSQWGWCGTSNDHCT--NNCQSNCRXXXX 246
           +++ LLCLI GA  + CG+QAGG+TCP N+CCSQ+GWCG ++D+C+   NCQSNC+    
Sbjct: 8   FLIVLLCLIAGATGEQCGKQAGGQTCPNNLCCSQYGWCGDTDDYCSPSKNCQSNCKGGGG 67

Query: 247 XXXXXXXXXXXESASNVRATYHIYNPAQNGWDLNRVSAYCATWDANKPLAWRQQYGWTAF 426
                      ESASNVRATYH+YNP  +GWDLN VSAYC+TWDA KP +WR +YGWTAF
Sbjct: 68  -----------ESASNVRATYHLYNPQDHGWDLNAVSAYCSTWDAGKPYSWRSKYGWTAF 116

Query: 427 CGPVGPRGQ 453
           CGP GPRGQ
Sbjct: 117 CGPAGPRGQ 125


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