BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001422
         (1030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing fac...   318   1e-84
emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]   316   5e-84
gb|AAS00039.1| splicing factor-like protein [Vitis riparia]           316   5e-84
ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|2...   307   2e-81
ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing fac...   292   8e-77

>ref|XP_002279907.2| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 480

 Score =  318 bits (815), Expect = 1e-84
 Identities = 171/277 (61%), Positives = 187/277 (67%), Gaps = 7/277 (2%)
 Frame = -3

Query: 875 KMRPIFCGNFEYDARQSDLERIFGKYGKVDRVDMKSGFAFVYMDDERDAEDAIRGLDRAE 696
           KMRPIFCGNF+YDARQSDLER+F +YGKVDRVDMK+GFAF+YM+DERDAEDAIRGLDR  
Sbjct: 2   KMRPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTG 61

Query: 695 FGRQGRRLRVEWTKQEXXXXXXXXXXXXXANMRPTKTLFVINFDPIHTRTRDLERHFDPY 516
           FGR+GRRLRVEWTKQE              N+RP KTLFVINFDP +TRTRDLERHFDPY
Sbjct: 62  FGRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPY 121

Query: 515 GKILNIRIRRNFAFIQFESQEDATKALDATNMSKLMDRVISVEYAVRDDDEKXXXXXXXX 336
           GKILNIRIRRNFAFIQ+ESQEDAT+AL+ATNMSKLMDRVISVEYAVRDDDE+        
Sbjct: 122 GKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDG 181

Query: 335 XXXXXXXXXXXXXXXXXXXXXXXXXXPDNGHGAXXXXXXXXXXXXXXPYERERGSPDYGR 156
                                     PD G G+               Y RER SPDYGR
Sbjct: 182 RRRDKSSERSYDKGRSLSPYRRERGSPDYGRGS-----------SPSAYRRERASPDYGR 230

Query: 155 DGSPVRRSRDHV-------RSPSPYRREMGSFDNGRG 66
           D SP  R RD         RSPS +RRE  S D+ RG
Sbjct: 231 DPSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARG 267


>emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis vinifera]
          Length = 479

 Score =  316 bits (810), Expect = 5e-84
 Identities = 170/276 (61%), Positives = 186/276 (67%), Gaps = 7/276 (2%)
 Frame = -3

Query: 872 MRPIFCGNFEYDARQSDLERIFGKYGKVDRVDMKSGFAFVYMDDERDAEDAIRGLDRAEF 693
           MRPIFCGNF+YDARQSDLER+F +YGKVDRVDMK+GFAF+YM+DERDAEDAIRGLDR  F
Sbjct: 1   MRPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGF 60

Query: 692 GRQGRRLRVEWTKQEXXXXXXXXXXXXXANMRPTKTLFVINFDPIHTRTRDLERHFDPYG 513
           GR+GRRLRVEWTKQE              N+RP KTLFVINFDP +TRTRDLERHFDPYG
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPYG 120

Query: 512 KILNIRIRRNFAFIQFESQEDATKALDATNMSKLMDRVISVEYAVRDDDEKXXXXXXXXX 333
           KILNIRIRRNFAFIQ+ESQEDAT+AL+ATNMSKLMDRVISVEYAVRDDDE+         
Sbjct: 121 KILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDGR 180

Query: 332 XXXXXXXXXXXXXXXXXXXXXXXXXPDNGHGAXXXXXXXXXXXXXXPYERERGSPDYGRD 153
                                    PD G G+               Y RER SPDYGRD
Sbjct: 181 RRDKSSERSYDKGRSLSPYRRERGSPDYGRGS-----------SPSAYRRERASPDYGRD 229

Query: 152 GSPVRRSRDHV-------RSPSPYRREMGSFDNGRG 66
            SP  R RD         RSPS +RRE  S D+ RG
Sbjct: 230 PSPSPRRRDRAIPDHGRSRSPSHHRRERTSHDSARG 265


>gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
          Length = 478

 Score =  316 bits (810), Expect = 5e-84
 Identities = 170/276 (61%), Positives = 186/276 (67%), Gaps = 7/276 (2%)
 Frame = -3

Query: 872 MRPIFCGNFEYDARQSDLERIFGKYGKVDRVDMKSGFAFVYMDDERDAEDAIRGLDRAEF 693
           MRPIFCGNF+YDARQSDLER+F +YGKVDRVDMK+GFAF+YM+DERDAEDAIRGLDR  F
Sbjct: 1   MRPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGF 60

Query: 692 GRQGRRLRVEWTKQEXXXXXXXXXXXXXANMRPTKTLFVINFDPIHTRTRDLERHFDPYG 513
           GR+GRRLRVEWTKQE              N+RP KTLFVINFDP +TRTRDLERHFDPYG
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPSGSRRSSTNLRPAKTLFVINFDPYNTRTRDLERHFDPYG 120

Query: 512 KILNIRIRRNFAFIQFESQEDATKALDATNMSKLMDRVISVEYAVRDDDEKXXXXXXXXX 333
           KILNIRIRRNFAFIQ+ESQEDAT+AL+ATNMSKLMDRVISVEYAVRDDDE+         
Sbjct: 121 KILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSPDGR 180

Query: 332 XXXXXXXXXXXXXXXXXXXXXXXXXPDNGHGAXXXXXXXXXXXXXXPYERERGSPDYGRD 153
                                    PD G G+               Y RER SPDYGRD
Sbjct: 181 RRDKSSERSYDKGRSLSPYRRERGSPDYGRGS-----------SPSAYRRERASPDYGRD 229

Query: 152 GSPVRRSRDHV-------RSPSPYRREMGSFDNGRG 66
            SP  R RD         RSPS +RRE  S D+ RG
Sbjct: 230 PSPSPRRRDRAMPDHGRSRSPSHHRRERTSHDSARG 265


>ref|XP_002322436.1| predicted protein [Populus trichocarpa] gi|222869432|gb|EEF06563.1|
           predicted protein [Populus trichocarpa]
          Length = 343

 Score =  307 bits (787), Expect = 2e-81
 Identities = 162/274 (59%), Positives = 186/274 (67%), Gaps = 5/274 (1%)
 Frame = -3

Query: 872 MRPIFCGNFEYDARQSDLERIFGKYGKVDRVDMKSGFAFVYMDDERDAEDAIRGLDRAEF 693
           MRPIFCGNFEYDARQ++LER+F +YG+V+RVDMKSGFAF+YM+DERDAEDAIRGLDR EF
Sbjct: 1   MRPIFCGNFEYDARQTELERLFKRYGRVERVDMKSGFAFIYMEDERDAEDAIRGLDRVEF 60

Query: 692 GRQGRRLRVEWTKQEXXXXXXXXXXXXXANMRPTKTLFVINFDPIHTRTRDLERHFDPYG 513
           GR+GRRLRVEWTKQE              N RP+KTLFVINFDP HTRT+DLERHF+PYG
Sbjct: 61  GRKGRRLRVEWTKQERGIRRPGGTSRRSTNTRPSKTLFVINFDPHHTRTKDLERHFEPYG 120

Query: 512 KILNIRIRRNFAFIQFESQEDATKALDATNMSKLMDRVISVEYAVRDDDEKXXXXXXXXX 333
           +I+++RIRRNFAF+Q+E+QEDATKALDATN+SKL+DRVISVEYAVRDDDE+         
Sbjct: 121 RIVSVRIRRNFAFVQYEAQEDATKALDATNLSKLLDRVISVEYAVRDDDER--------- 171

Query: 332 XXXXXXXXXXXXXXXXXXXXXXXXXPDNGHGAXXXXXXXXXXXXXXPYERERGSPDYGRD 153
                                    PD                   PY RERGSPDYGR 
Sbjct: 172 --------------------KDGYSPDRSRDRSPDRRGHDRRRSPSPYRRERGSPDYGRG 211

Query: 152 GSPVRRSR-----DHVRSPSPYRREMGSFDNGRG 66
            SP R+ R        RSPSPYRR+  S D GRG
Sbjct: 212 PSPYRKERGSPDYGRRRSPSPYRRDRASPDYGRG 245


>ref|XP_002273751.1| PREDICTED: arginine/serine-rich-splicing factor RSP40-like [Vitis
           vinifera]
          Length = 252

 Score =  292 bits (748), Expect = 8e-77
 Identities = 162/261 (62%), Positives = 174/261 (66%), Gaps = 2/261 (0%)
 Frame = -3

Query: 872 MRPIFCGNFEYDARQSDLERIFGKYGKVDRVDMKSGFAFVYMDDERDAEDAIRGLDRAEF 693
           M+PIFCGN EYDARQSD+ER+F +YGKVDRVD+KSGFAFVYMDDERDAEDAIR LDR  F
Sbjct: 1   MKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGFAFVYMDDERDAEDAIRRLDRTVF 60

Query: 692 GRQGRRLRVEWTKQEXXXXXXXXXXXXXANMRPTKTLFVINFDPIHTRTRDLERHFDPYG 513
           GR+GR+LRVEWTKQE             ANM+P+KTLFVINFDPIHTRTRDLERHFD YG
Sbjct: 61  GRKGRQLRVEWTKQERGIRRPGGSRKSSANMKPSKTLFVINFDPIHTRTRDLERHFDLYG 120

Query: 512 KILNIRIRRNFAFIQFESQEDATKALDATNMSKLMDRVISVEYAVRDDDE--KXXXXXXX 339
           KILNIRIRRNFAFIQFESQEDATKALDATNMSK MDRVISVEYA RDDD+  +       
Sbjct: 121 KILNIRIRRNFAFIQFESQEDATKALDATNMSKFMDRVISVEYAARDDDDDRRNGYSPER 180

Query: 338 XXXXXXXXXXXXXXXXXXXXXXXXXXXPDNGHGAXXXXXXXXXXXXXXPYERERGSPDYG 159
                                      PD GHGA                   RGSP+Y 
Sbjct: 181 RGRDMSPDRRSHDRGRSPSPYHRDRASPDYGHGANANSR-----------SEPRGSPNYD 229

Query: 158 RDGSPVRRSRDHVRSPSPYRR 96
           RD SPV   R H RSP P  R
Sbjct: 230 RDESPV-NERYHSRSPPPRER 249