BLASTX nr result
ID: Coptis21_contig00001416
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001416
(3948 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 757 0.0
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2... 736 0.0
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ... 721 0.0
ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 700 0.0
ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 700 0.0
>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
vinifera]
Length = 540
Score = 757 bits (1954), Expect = 0.0
Identities = 380/533 (71%), Positives = 450/533 (84%), Gaps = 7/533 (1%)
Frame = +3
Query: 42 EGNVKATSSSVSNDGEDT---VKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSL 212
+GN S +++D E T VKERCWDQREA+ GEP CVICGRYGEYICDETDDD+CSL
Sbjct: 6 KGNQGKNSVELTDDNEGTADGVKERCWDQREALPGEPKCVICGRYGEYICDETDDDICSL 65
Query: 213 ECKQTVLSNLAKCRKPEKPAPPVRLPVTDECFYVRD-GDKSGAQHLTSDQIALLRSKIEI 389
ECKQT+L +AK R P PP RLP TDECFYVRD GDKSG+Q LT Q +LR ++EI
Sbjct: 66 ECKQTLLCRVAKSRLPVVLPPPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEI 125
Query: 390 RVKGDSIPPPILAFSSCNLPEKLQLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGS 569
V+GD PIL+FSSCNLP+KL N+EAAGYE+PTPVQMQ+IPAAL GKNLLVSA+TGS
Sbjct: 126 CVRGDFDLSPILSFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGS 185
Query: 570 GKTASFLVPVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTAL 749
GKTASFLVP+VS CT+ R + KNP+AMVL PTRELC+Q+EEQAKL G+GLPFKTAL
Sbjct: 186 GKTASFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTRELCMQVEEQAKLLGKGLPFKTAL 245
Query: 750 VVGGEAMAGQIYRIQQGVELIVGTPGRLIDLFTKHDIELDEISVLVLDEVDCMLQRGFRD 929
VVGG+AM Q++RIQQGVELIVGTPGRLIDL +KH+IELD++ +LVLDEVDCML+RGFRD
Sbjct: 246 VVGGDAMPRQLHRIQQGVELIVGTPGRLIDLLSKHEIELDDVFMLVLDEVDCMLERGFRD 305
Query: 930 QVMRIFQALFKPQILMYSATISSEVEKMASSMAKDLIYISIGKPNLPIESVKQVIIWVES 1109
QVM+I++AL +PQ+LMYSATIS EVEK+ASSMAKD+I IS+GK N P +VKQ+ IWVES
Sbjct: 306 QVMQIYRALSQPQVLMYSATISQEVEKVASSMAKDIIVISVGKSNRPNIAVKQLAIWVES 365
Query: 1110 KKKKQKLFEIITSQQHFKPPVVVFVDSKIGAELLSEAITVTTGIKTLSIHGDKPMKERRE 1289
K+KKQKLF+I+TS+QHF PPVVVFV S++GA+LL+EAIT+TTG+K LSIHG+K MKERRE
Sbjct: 366 KQKKQKLFDILTSKQHFTPPVVVFVGSRLGADLLTEAITITTGLKALSIHGEKSMKERRE 425
Query: 1290 TLRQFLMGEVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAM 1469
+ FL+GEV V+VATGVL RGVDLL VRQVIVFDMPNSIKEY+HQIGRASRLGEEG A+
Sbjct: 426 IMSSFLVGEVPVMVATGVLSRGVDLLSVRQVIVFDMPNSIKEYVHQIGRASRLGEEGTAI 485
Query: 1470 AFVNEENKNLFQELVEVLKSSRAVVPRELANSRYTRASYSIGK---QQNKRKY 1619
F+NEEN+NLF ELVE+LKSS A +PRELANSRY S ++G+ +Q KRK+
Sbjct: 486 LFLNEENRNLFPELVEILKSSGAAIPRELANSRYRLGSVNVGRGQIRQKKRKH 538
>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
predicted protein [Populus trichocarpa]
Length = 524
Score = 736 bits (1900), Expect = 0.0
Identities = 364/517 (70%), Positives = 431/517 (83%)
Frame = +3
Query: 69 SVSNDGEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSNLAK 248
+VS D VK+ DQREA+ GEP+CV+CGRYGEYICD+TD D+CSLECKQT+L A
Sbjct: 10 TVSEAAGDDVKKTSRDQREALPGEPICVVCGRYGEYICDQTDSDICSLECKQTLLGRAAD 69
Query: 249 CRKPEKPAPPVRLPVTDECFYVRDGDKSGAQHLTSDQIALLRSKIEIRVKGDSIPPPILA 428
P P RL TDECFYVRD + LTSDQ LLR K+EI VKGDS+P PIL+
Sbjct: 70 THLPVGHPLPKRLAATDECFYVRDSESP----LTSDQTELLRRKLEIHVKGDSVPDPILS 125
Query: 429 FSSCNLPEKLQLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVPVVSL 608
FSSCNLPEKL N++ GY++PTP+QMQ I AALTGK+LL SA+TGSGKTASFLVPVVS
Sbjct: 126 FSSCNLPEKLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSR 185
Query: 609 CTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMAGQIYR 788
C FR N +K K P+AMVL PTRELC+Q+EEQAKL G+GLPFKTALV+GG+AM Q+YR
Sbjct: 186 CATFRHGNISKSKKPLAMVLTPTRELCIQVEEQAKLLGKGLPFKTALVIGGDAMPRQLYR 245
Query: 789 IQQGVELIVGTPGRLIDLFTKHDIELDEISVLVLDEVDCMLQRGFRDQVMRIFQALFKPQ 968
IQQGVELIVGTPGRLIDL KHDIELD+I +LVLDEVDCMLQ+GFRDQVM+IF+AL +PQ
Sbjct: 246 IQQGVELIVGTPGRLIDLLAKHDIELDDIMILVLDEVDCMLQQGFRDQVMQIFRALSQPQ 305
Query: 969 ILMYSATISSEVEKMASSMAKDLIYISIGKPNLPIESVKQVIIWVESKKKKQKLFEIITS 1148
+LMYSAT+S EVEKMASSMAKDLI++SIG+PN P ++VKQ+ IWVESK+KKQKLF+I+ S
Sbjct: 306 VLMYSATMSQEVEKMASSMAKDLIFVSIGQPNRPSKAVKQLAIWVESKQKKQKLFDILMS 365
Query: 1149 QQHFKPPVVVFVDSKIGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGEVSVI 1328
+QHF PP +V+V S+IGA+LLS AITVTTG+K LSIHG+K MKERRE ++ FL+GEV ++
Sbjct: 366 KQHFLPPSIVYVGSRIGADLLSNAITVTTGLKALSIHGEKSMKERREIMKSFLVGEVPLV 425
Query: 1329 VATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKNLFQE 1508
VATGVLGRGVDLL VRQVIVFDMPN IKEY+HQIGRASR+GE+G ++ FVNEEN+NLF +
Sbjct: 426 VATGVLGRGVDLLGVRQVIVFDMPNCIKEYVHQIGRASRMGEDGTSIVFVNEENRNLFPD 485
Query: 1509 LVEVLKSSRAVVPRELANSRYTRASYSIGKQQNKRKY 1619
LVEVLKSS AV+PREL NSRY + S+ +GK Q KRKY
Sbjct: 486 LVEVLKSSGAVIPRELVNSRYVKRSFPMGKGQRKRKY 522
>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 514
Score = 721 bits (1862), Expect = 0.0
Identities = 358/514 (69%), Positives = 430/514 (83%)
Frame = +3
Query: 78 NDGEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSNLAKCRK 257
+DG VK+ +QREA+ GEP CV+CGRYGEYICDETDDD+CSLECKQ +L + K
Sbjct: 8 SDGASDVKKTSREQREALQGEPKCVLCGRYGEYICDETDDDICSLECKQILLGGVGKSDI 67
Query: 258 PEKPAPPVRLPVTDECFYVRDGDKSGAQHLTSDQIALLRSKIEIRVKGDSIPPPILAFSS 437
PP RL TDECFYVR+ +G LT+DQ LLR +EI VKG+ +P PIL+FSS
Sbjct: 68 SVGIPPPRRLAATDECFYVRE---NGTSSLTNDQTELLRRTLEIHVKGELVPDPILSFSS 124
Query: 438 CNLPEKLQLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVPVVSLCTA 617
CNLP+KL LNLEAAGY++PTPVQMQ+IP AL+GK+LL SA+TGSGKTAS+LVP++S C +
Sbjct: 125 CNLPQKLLLNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIISSCAS 184
Query: 618 FRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMAGQIYRIQQ 797
+R H+ + P+AMVL PTRELC+Q+E+QAKLFG+GLPFKTALVVGG+AMAGQ+YRIQQ
Sbjct: 185 YRLQ-HSSDRKPLAMVLTPTRELCIQVEDQAKLFGKGLPFKTALVVGGDAMAGQLYRIQQ 243
Query: 798 GVELIVGTPGRLIDLFTKHDIELDEISVLVLDEVDCMLQRGFRDQVMRIFQALFKPQILM 977
GVELIVGTPGRLIDL TKHDIELD + + V+DEVDCMLQRGFRDQVM+IF AL +PQ+L+
Sbjct: 244 GVELIVGTPGRLIDLLTKHDIELDNMIIFVIDEVDCMLQRGFRDQVMQIFWALSQPQVLL 303
Query: 978 YSATISSEVEKMASSMAKDLIYISIGKPNLPIESVKQVIIWVESKKKKQKLFEIITSQQH 1157
YSAT++ EVEKMASSMAKD+ +SIG+PN P ++VKQ+ IWVE K+KKQKLF+I+ S+QH
Sbjct: 304 YSATVTQEVEKMASSMAKDMALVSIGQPNRPSKAVKQLAIWVEPKQKKQKLFDILMSKQH 363
Query: 1158 FKPPVVVFVDSKIGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGEVSVIVAT 1337
F PP VV+V S++GA+LLS AITVTTG K+LSIHG+K MKERRE ++ FL+GEV+VIVAT
Sbjct: 364 FMPPAVVYVGSRLGADLLSNAITVTTGWKSLSIHGEKSMKERREIMKSFLVGEVTVIVAT 423
Query: 1338 GVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKNLFQELVE 1517
GVLGRGVDL VRQVI+FDMPNSIKEYIHQIGRASR+GE G+A+ FVNEENKNLF E +E
Sbjct: 424 GVLGRGVDLFGVRQVIIFDMPNSIKEYIHQIGRASRMGEGGIAIVFVNEENKNLFPEFIE 483
Query: 1518 VLKSSRAVVPRELANSRYTRASYSIGKQQNKRKY 1619
VLKSS AV+PRELANSR YS+GK Q KRKY
Sbjct: 484 VLKSSAAVIPRELANSR-----YSVGKGQKKRKY 512
>ref|XP_003548927.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
Length = 528
Score = 700 bits (1807), Expect = 0.0
Identities = 348/521 (66%), Positives = 428/521 (82%), Gaps = 1/521 (0%)
Frame = +3
Query: 60 TSSSVSNDGEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLSN 239
T + ND ED VK R DQR A+ GEP C+ICGRYGEYICDETDDDVCSLECKQ +L
Sbjct: 15 TDAEAPNDVEDDVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLCR 74
Query: 240 LAKCRKPEKPAPPVRLPVTDECFYVRDGD-KSGAQHLTSDQIALLRSKIEIRVKGDSIPP 416
+AK P PP +P DECFYVRD D KSG + SD LR K++IRVKGD + P
Sbjct: 75 IAKSLSP----PPKTIPAADECFYVRDSDFKSGTVSMGSD----LRKKLDIRVKGDVVAP 126
Query: 417 PILAFSSCNLPEKLQLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLVP 596
+L+FS+CNLP+KL N+EAAGYE+PTPVQMQ+IPAALTGK++LV A+TGSGK+ASFL+P
Sbjct: 127 -VLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLVLADTGSGKSASFLIP 185
Query: 597 VVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMAG 776
+VS C R + K P+AMVL PTRELC+Q+EE AKL G+GLPFKTALVVGG+AMAG
Sbjct: 186 IVSRCVIHRRQYFSGKKKPLAMVLTPTRELCIQVEEHAKLLGKGLPFKTALVVGGDAMAG 245
Query: 777 QIYRIQQGVELIVGTPGRLIDLFTKHDIELDEISVLVLDEVDCMLQRGFRDQVMRIFQAL 956
Q++RIQQGVELIVGTPGRL+DL KH+I+LD++ V+DEVDCMLQRGFRDQVM+I++AL
Sbjct: 246 QLHRIQQGVELIVGTPGRLVDLLMKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRAL 305
Query: 957 FKPQILMYSATISSEVEKMASSMAKDLIYISIGKPNLPIESVKQVIIWVESKKKKQKLFE 1136
+PQ+LMYSAT+S+++EKM +++AK ++ +SIG+PN P ++VKQ+ IWVESK+KKQKLFE
Sbjct: 306 SQPQVLMYSATMSNDLEKMINTLAKGMVVMSIGEPNTPNKAVKQLAIWVESKQKKQKLFE 365
Query: 1137 IITSQQHFKPPVVVFVDSKIGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMGE 1316
I+ S++HFKPPVVV+V S++GA+LL+ AITV TGIK +SIHG+K MKERRET++ FL+GE
Sbjct: 366 ILASKKHFKPPVVVYVGSRLGADLLANAITVATGIKAVSIHGEKSMKERRETMQSFLVGE 425
Query: 1317 VSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENKN 1496
V V+VATGVLGRGVDLL VRQVIVFDMPN+IKEY+HQIGRASR+GEEG + FVNEENKN
Sbjct: 426 VPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRASRMGEEGQGIVFVNEENKN 485
Query: 1497 LFQELVEVLKSSRAVVPRELANSRYTRASYSIGKQQNKRKY 1619
+F EL++VLKS A VPRELANSRY +S GK KRK+
Sbjct: 486 VFAELIDVLKSGGAAVPRELANSRYATRVFSGGKGSKKRKH 526
>ref|XP_003519940.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Glycine max]
Length = 528
Score = 700 bits (1807), Expect = 0.0
Identities = 345/522 (66%), Positives = 429/522 (82%), Gaps = 1/522 (0%)
Frame = +3
Query: 57 ATSSSVSNDGEDTVKERCWDQREAVLGEPVCVICGRYGEYICDETDDDVCSLECKQTVLS 236
AT + ND ED VK R DQR A+ GEP C+ICGRYGEYICDETDDDVCSLECKQ +L
Sbjct: 14 ATDTDAPNDAEDEVKLRSRDQRLALPGEPKCIICGRYGEYICDETDDDVCSLECKQALLC 73
Query: 237 NLAKCRKPEKPAPPVRLPVTDECFYVRDGD-KSGAQHLTSDQIALLRSKIEIRVKGDSIP 413
+AK P PP R+P DECFYV+D D +SG + SD LR K++I VKGD +
Sbjct: 74 RIAKSSSP----PPKRIPAADECFYVKDADYESGTASMASD----LRKKLDIHVKGDVVA 125
Query: 414 PPILAFSSCNLPEKLQLNLEAAGYEVPTPVQMQSIPAALTGKNLLVSAETGSGKTASFLV 593
P +L+FS+CNLP+KL N+EAAGYE+PTPVQMQ+IPAALTGK++L+ A+TGSGK+ASFL+
Sbjct: 126 P-VLSFSACNLPDKLLHNIEAAGYEMPTPVQMQAIPAALTGKSMLLLADTGSGKSASFLI 184
Query: 594 PVVSLCTAFRSSNHAKVKNPIAMVLAPTRELCVQIEEQAKLFGRGLPFKTALVVGGEAMA 773
P+VS C R + KNP+A+VL PTRELC+Q+EE AKL G+G+PFKTALVVGG+AMA
Sbjct: 185 PIVSRCAIHRRQYVSDKKNPLALVLTPTRELCMQVEEHAKLLGKGMPFKTALVVGGDAMA 244
Query: 774 GQIYRIQQGVELIVGTPGRLIDLFTKHDIELDEISVLVLDEVDCMLQRGFRDQVMRIFQA 953
GQ++RIQQGVELIVGTPGRL+DL TKH+I+LD++ V+DEVDCMLQRGFRDQVM+I++A
Sbjct: 245 GQLHRIQQGVELIVGTPGRLVDLLTKHEIDLDDVMTFVVDEVDCMLQRGFRDQVMQIYRA 304
Query: 954 LFKPQILMYSATISSEVEKMASSMAKDLIYISIGKPNLPIESVKQVIIWVESKKKKQKLF 1133
L +PQ+LMYSAT+S+++EKM +++ K + IS+G+PN P ++VKQ+ IWVESK+KKQKLF
Sbjct: 305 LSQPQVLMYSATMSNDLEKMINTLVKGTVVISVGEPNTPNKAVKQLAIWVESKEKKQKLF 364
Query: 1134 EIITSQQHFKPPVVVFVDSKIGAELLSEAITVTTGIKTLSIHGDKPMKERRETLRQFLMG 1313
EI+ S++HFKPPVVV+V S++GA+LL+ AITV+TGIK +SIHG+K MKERRET++ L+G
Sbjct: 365 EILESKKHFKPPVVVYVGSRLGADLLANAITVSTGIKAVSIHGEKSMKERRETMQSLLVG 424
Query: 1314 EVSVIVATGVLGRGVDLLKVRQVIVFDMPNSIKEYIHQIGRASRLGEEGVAMAFVNEENK 1493
EV V+VATGVLGRGVDLL VRQVIVFDMPN+IKEY+HQIGRASR+GEEG + FVNEENK
Sbjct: 425 EVPVVVATGVLGRGVDLLGVRQVIVFDMPNNIKEYVHQIGRASRMGEEGQGIVFVNEENK 484
Query: 1494 NLFQELVEVLKSSRAVVPRELANSRYTRASYSIGKQQNKRKY 1619
N+F EL+EVLKS A VPRELANSRY +S GK KRK+
Sbjct: 485 NIFAELIEVLKSGGAAVPRELANSRYATGVFSGGKGSKKRKH 526