BLASTX nr result

ID: Coptis21_contig00001415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001415
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37313.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...    63   3e-08

>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
 Frame = -3

Query: 235 NTSSTVEKQTPDMLAHANASL-------LSAEAHSGSEVISALAVEESSILENDLKDGIC 77
           ++S+ V+K   D++     SL       +S +   G+   + LA EE+ +L+N+L D  C
Sbjct: 126 SSSNRVKKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNL-DQTC 184

Query: 76  ELVSISDVLCVACKQLLFRPAVLNC 2
           E +SI+DV C ACKQLLFRP VLNC
Sbjct: 185 EQLSIADVQCTACKQLLFRPVVLNC 209


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 7/85 (8%)
 Frame = -3

Query: 235 NTSSTVEKQTPDMLAHANASL-------LSAEAHSGSEVISALAVEESSILENDLKDGIC 77
           ++S+ V+K   D++     SL       +S +   G+   + LA EE+ +L+N+L D  C
Sbjct: 145 SSSNRVKKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNL-DQTC 203

Query: 76  ELVSISDVLCVACKQLLFRPAVLNC 2
           E +SI+DV C ACKQLLFRP VLNC
Sbjct: 204 EQLSIADVQCTACKQLLFRPVVLNC 228


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