BLASTX nr result
ID: Coptis21_contig00001415
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001415 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37313.3| unnamed protein product [Vitis vinifera] 63 3e-08 ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-... 63 3e-08 >emb|CBI37313.3| unnamed protein product [Vitis vinifera] Length = 451 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 7/85 (8%) Frame = -3 Query: 235 NTSSTVEKQTPDMLAHANASL-------LSAEAHSGSEVISALAVEESSILENDLKDGIC 77 ++S+ V+K D++ SL +S + G+ + LA EE+ +L+N+L D C Sbjct: 126 SSSNRVKKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNL-DQTC 184 Query: 76 ELVSISDVLCVACKQLLFRPAVLNC 2 E +SI+DV C ACKQLLFRP VLNC Sbjct: 185 EQLSIADVQCTACKQLLFRPVVLNC 209 >ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera] Length = 470 Score = 62.8 bits (151), Expect = 3e-08 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 7/85 (8%) Frame = -3 Query: 235 NTSSTVEKQTPDMLAHANASL-------LSAEAHSGSEVISALAVEESSILENDLKDGIC 77 ++S+ V+K D++ SL +S + G+ + LA EE+ +L+N+L D C Sbjct: 145 SSSNRVKKHFADLMQRQPVSLPQDFVIPISKQTSGGNPQGATLADEENVVLKNNL-DQTC 203 Query: 76 ELVSISDVLCVACKQLLFRPAVLNC 2 E +SI+DV C ACKQLLFRP VLNC Sbjct: 204 EQLSIADVQCTACKQLLFRPVVLNC 228