BLASTX nr result
ID: Coptis21_contig00001412
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00001412 (2201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30135.3| unnamed protein product [Vitis vinifera] 672 0.0 ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|2... 662 0.0 ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containi... 651 0.0 ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containi... 624 e-176 ref|XP_003624990.1| Pentatricopeptide repeat-containing protein ... 620 e-175 >emb|CBI30135.3| unnamed protein product [Vitis vinifera] Length = 624 Score = 672 bits (1733), Expect = 0.0 Identities = 355/628 (56%), Positives = 459/628 (73%), Gaps = 6/628 (0%) Frame = -1 Query: 2150 MWALRRTINPFR--GYHVGAFRACGVKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKNFY 1977 MWALRR+ N + G+ +G +AC K + L+ C Q + + LS K FY Sbjct: 1 MWALRRSSNRLKNQGFSIGTLQACHAKSEMLSTYYKDMTGICKSPQVINDCHLSSRK-FY 59 Query: 1976 ESPSAVGKLSFGSRGLSSQAGAESSGDEDNLEDGFSELETP-LSDVTEEVTAEEDIED-L 1803 S GS SSQAGA+SSG+ED+LEDGFSELE + ++ AE + ED L Sbjct: 60 HPTDIYSVFSMGSCSFSSQAGAKSSGEEDDLEDGFSELEASGNAGGFQDSDAESEHEDEL 119 Query: 1802 ISEPELSGEDDILTEDPHDEHDILDTKQGVSDGVPPKKAASSDLFKVISVATRFTLNDVL 1623 +S+P+ S +D+I E +E + LDT VS+ P+K SS+LFK I A+ ++ VL Sbjct: 120 LSDPK-SDDDEI--ESTQNELEPLDTDTDVSEKRSPRKRVSSELFKAIMAASDQPIHSVL 176 Query: 1622 DKWLERGNTLNRNEISLVMLNLRKRRNYGKALQFSEWLEKKRTFD--ERDYASRLDLIAK 1449 +KW + G ++R EI+ MLNLRK R + KALQFSEW+E+ + D ERDYASR+DLIAK Sbjct: 177 NKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEHKKLDMVERDYASRVDLIAK 236 Query: 1448 VLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQITAFACN 1269 V GL KAE Y++ +P+SFRGE++YRTLLANCV N +KAE+VFNKMK L IT FACN Sbjct: 237 VRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAEEVFNKMKDLGFPITTFACN 296 Query: 1268 QXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKCVETMKEDG 1089 Q KIADVL LME ++++ S FTY LLID +GQ+NDI GME+ VETMK +G Sbjct: 297 QLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKGQSNDITGMEQIVETMKAEG 356 Query: 1088 FEPDIQTQGLLVRHYVTGGFTEKAEAILKKMEGANLKENRWACRILLPLYADLGMDKEVG 909 EP++Q Q +LVRHYV GG EKAEAILK+MEG NLKENRW CR+LLP YA LG +V Sbjct: 357 IEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRWVCRVLLPPYAALGKADDVE 416 Query: 908 RIWKICDPNPRVEECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTTLLKVYANH 729 RIWK+C+ NPR+ E +AAIEA+GK+ KVEEAEA+F++M++T+K+LSS++Y+ LLKVYA+H Sbjct: 417 RIWKVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKTFKRLSSKHYSALLKVYADH 476 Query: 728 KMLTKGKDLAKRMAESGQRLDAFTWDALVKLYVEAGEVEKADSILQKSSQQNQLKPMFSS 549 KML KGKDL K+M++SG R+ TWDALVKLYVEAGEVEKAD ILQK+ QQ+ +KPMFS+ Sbjct: 477 KMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKADKILQKAMQQSPIKPMFST 536 Query: 548 YMYIMEQYAKRGDVHNAEKIFTRLKQSGYVGRLRQYTTLLDTYVNAKVPAYGFRDRMKGD 369 YM IM+QYAKRGD+HN+EK+F +++QSGYV RLRQ+ L+ YVNAK PAYG ++RMK D Sbjct: 537 YMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQAYVNAKAPAYGIKERMKAD 596 Query: 368 NIFPNKPMQAKLAKVDAFKKTAVSDILD 285 NIFPN+ + +LA+VDAF+K+AVSD+LD Sbjct: 597 NIFPNRVVAGQLAQVDAFRKSAVSDLLD 624 >ref|XP_002308888.1| predicted protein [Populus trichocarpa] gi|222854864|gb|EEE92411.1| predicted protein [Populus trichocarpa] Length = 555 Score = 662 bits (1708), Expect = 0.0 Identities = 332/557 (59%), Positives = 427/557 (76%), Gaps = 6/557 (1%) Frame = -1 Query: 1937 RGLSSQAGAESSGDEDNLEDGFSELETPLSDVTEEVTAEEDIED-LISEPELSGEDDILT 1761 RG +SQAGAE+SG +D+LEDGFSELETP + V A ED LISEPELS +D+ Sbjct: 1 RGFASQAGAENSGSDDDLEDGFSELETPANANESTVNALAGNEDQLISEPELSDDDNDDI 60 Query: 1760 EDPHDEHDILDTKQGVSDGVP---PKKAASSDLFKVISVATRFTLNDVLDKWLERGNTLN 1590 +P + L+ +D V P+K +++LF I A+ ++ VLDKW+ G L+ Sbjct: 61 GEP--SQNALELSDNETDSVVKSLPRKRPTTELFNAIVSASDVSVQSVLDKWVAEGKDLD 118 Query: 1589 RNEISLVMLNLRKRRNYGKALQFSEWLE--KKRTFDERDYASRLDLIAKVLGLYKAEAYV 1416 R EIS M+NLRKRR +G+ALQ SEW E K + F ERDYASRLDLIAKV GL+KAE Y+ Sbjct: 119 RLEISNAMINLRKRRMFGRALQLSEWFEANKPQEFVERDYASRLDLIAKVRGLHKAEVYI 178 Query: 1415 KDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQITAFACNQXXXXXXXXXX 1236 +P+SF+GEV+YRTLLANCVV N +KAE+VFNKM+ LE IT FACNQ Sbjct: 179 DKIPKSFKGEVIYRTLLANCVVDHNVKKAEEVFNKMRDLEFPITPFACNQLLLLYKRLDK 238 Query: 1235 XKIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKCVETMKEDGFEPDIQTQGLL 1056 KIADVL LME +N++ S FTY++LID +GQ+ND+ GM++ VETMK +G EPDI+TQ ++ Sbjct: 239 KKIADVLLLMEKENVKPSLFTYKILIDTKGQSNDMTGMDQIVETMKAEGIEPDIRTQAIM 298 Query: 1055 VRHYVTGGFTEKAEAILKKMEGANLKENRWACRILLPLYADLGMDKEVGRIWKICDPNPR 876 RHYV+GG EKAEAILK+MEG NL+E+RWACR +LPLY LG EV R+WK C+ +PR Sbjct: 299 ARHYVSGGLKEKAEAILKEMEGGNLEEHRWACRFMLPLYGALGKADEVSRVWKFCEKSPR 358 Query: 875 VEECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTTLLKVYANHKMLTKGKDLAK 696 ++EC+AAIEAWG++ K++EAEAVF+ M++TWKKLSSR+Y+TLLKVYANHKML+KGKDL K Sbjct: 359 LDECMAAIEAWGRLKKIDEAEAVFELMSKTWKKLSSRHYSTLLKVYANHKMLSKGKDLIK 418 Query: 695 RMAESGQRLDAFTWDALVKLYVEAGEVEKADSILQKSSQQNQLKPMFSSYMYIMEQYAKR 516 RM +SG R+ TWDALVKLYVEAGEVEKADSIL K+ QQN++KPM+SS++ IME+YA + Sbjct: 419 RMGDSGCRIGPLTWDALVKLYVEAGEVEKADSILNKAVQQNKIKPMYSSFLIIMERYATK 478 Query: 515 GDVHNAEKIFTRLKQSGYVGRLRQYTTLLDTYVNAKVPAYGFRDRMKGDNIFPNKPMQAK 336 GD+HNAEK+F R++Q+GY R+RQ+ TL+ Y+ AK P YG R+R+K D IFPNK + A+ Sbjct: 479 GDIHNAEKMFHRMRQAGYQARIRQFQTLIQAYIIAKAPCYGMRERLKADGIFPNKSLAAQ 538 Query: 335 LAKVDAFKKTAVSDILD 285 LA+VDAF++TAVSD+LD Sbjct: 539 LAQVDAFRRTAVSDLLD 555 >ref|XP_002266581.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Vitis vinifera] Length = 587 Score = 651 bits (1679), Expect = 0.0 Identities = 342/587 (58%), Positives = 439/587 (74%), Gaps = 4/587 (0%) Frame = -1 Query: 2033 CNLTQFVPNGSLSVPKNFYESPSAVGKLSFGSRGLSSQAGAESSGDEDNLEDGFSELETP 1854 C Q + + LS K FY S GS SSQAGA+SSG+ED+LEDGFSELE Sbjct: 5 CKSPQVINDCHLSSRK-FYHPTDIYSVFSMGSCSFSSQAGAKSSGEEDDLEDGFSELEAS 63 Query: 1853 -LSDVTEEVTAEEDIED-LISEPELSGEDDILTEDPHDEHDILDTKQGVSDGVPPKKAAS 1680 + ++ AE + ED L+S+P+ S +D+I E +E + LDT VS+ P+K S Sbjct: 64 GNAGGFQDSDAESEHEDELLSDPK-SDDDEI--ESTQNELEPLDTDTDVSEKRSPRKRVS 120 Query: 1679 SDLFKVISVATRFTLNDVLDKWLERGNTLNRNEISLVMLNLRKRRNYGKALQFSEWLEKK 1500 S+LFK I A+ ++ VL+KW + G ++R EI+ MLNLRK R + KALQFSEW+E+ Sbjct: 121 SELFKAIMAASDQPIHSVLNKWDQEGKDMSRAEIAQTMLNLRKIRMFLKALQFSEWMEEH 180 Query: 1499 RTFD--ERDYASRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAE 1326 + D ERDYASR+DLIAKV GL KAE Y++ +P+SFRGE++YRTLLANCV N +KAE Sbjct: 181 KKLDMVERDYASRVDLIAKVRGLQKAEHYIEKIPKSFRGELVYRTLLANCVSTTNAKKAE 240 Query: 1325 DVFNKMKKLELQITAFACNQXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDARG 1146 +VFNKMK L IT FACNQ KIADVL LME ++++ S FTY LLID +G Sbjct: 241 EVFNKMKDLGFPITTFACNQLLLLYKRVDKKKIADVLLLMEKEDVKPSLFTYGLLIDTKG 300 Query: 1145 QANDIEGMEKCVETMKEDGFEPDIQTQGLLVRHYVTGGFTEKAEAILKKMEGANLKENRW 966 Q+NDI GME+ VETMK +G EP++Q Q +LVRHYV GG EKAEAILK+MEG NLKENRW Sbjct: 301 QSNDITGMEQIVETMKAEGIEPNLQVQSILVRHYVFGGLKEKAEAILKEMEGGNLKENRW 360 Query: 965 ACRILLPLYADLGMDKEVGRIWKICDPNPRVEECLAAIEAWGKVGKVEEAEAVFDRMTQT 786 CR+LLP YA LG +V RIWK+C+ NPR+ E +AAIEA+GK+ KVEEAEA+F++M++T Sbjct: 361 VCRVLLPPYAALGKADDVERIWKVCESNPRLPEFVAAIEAYGKLKKVEEAEAIFNKMSKT 420 Query: 785 WKKLSSRNYTTLLKVYANHKMLTKGKDLAKRMAESGQRLDAFTWDALVKLYVEAGEVEKA 606 +K+LSS++Y+ LLKVYA+HKML KGKDL K+M++SG R+ TWDALVKLYVEAGEVEKA Sbjct: 421 FKRLSSKHYSALLKVYADHKMLIKGKDLVKQMSDSGCRIGPLTWDALVKLYVEAGEVEKA 480 Query: 605 DSILQKSSQQNQLKPMFSSYMYIMEQYAKRGDVHNAEKIFTRLKQSGYVGRLRQYTTLLD 426 D ILQK+ QQ+ +KPMFS+YM IM+QYAKRGD+HN+EK+F +++QSGYV RLRQ+ L+ Sbjct: 481 DKILQKAMQQSPIKPMFSTYMAIMDQYAKRGDIHNSEKMFHQMRQSGYVSRLRQFQCLIQ 540 Query: 425 TYVNAKVPAYGFRDRMKGDNIFPNKPMQAKLAKVDAFKKTAVSDILD 285 YVNAK PAYG ++RMK DNIFPN+ + +LA+VDAF+K+AVSD+LD Sbjct: 541 AYVNAKAPAYGIKERMKADNIFPNRVVAGQLAQVDAFRKSAVSDLLD 587 >ref|XP_003518031.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80270, mitochondrial-like [Glycine max] Length = 609 Score = 624 bits (1608), Expect = e-176 Identities = 341/633 (53%), Positives = 437/633 (69%), Gaps = 11/633 (1%) Frame = -1 Query: 2150 MWALRRT---INPFRGYHVGAFRACGVKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKNF 1980 MW LRR ++ +G + GA RA VKL +T + ++ A Q + LS F Sbjct: 1 MWTLRRASLRLSTSQGLNAGATRASAVKLVPITVE-ENEAGIPQSRQITHSRFLSAD-TF 58 Query: 1979 YESPSAVGKLSFGSRGLSSQAGAESSG-DEDNLEDGFSELETPLSDVTEEVTAEEDIEDL 1803 + K + G+R LSSQAGA S+ D+D+LE G SELE S+ +E DL Sbjct: 59 CRTGRVSLKFAVGTRELSSQAGASSTKVDDDDLEGGLSELEIQGSN-------DESDADL 111 Query: 1802 ISEPELSGEDDILTEDPHDEHDILDTKQGVSDGVPPKKAAS-----SDLFKVISVATRFT 1638 E E G+ P DE D+ SD P KK + S+LFK I+ A + Sbjct: 112 SDEDEDGGK-------PVDEMDL-------SDADPTKKKSQGRRTQSELFKAIANAPGLS 157 Query: 1637 LNDVLDKWLERGNTLNRNEISLVMLNLRKRRNYGKALQFSEWLE--KKRTFDERDYASRL 1464 ++ L+KW+E G L+R EI L + LR+R+ YG+A Q +WLE KK F E DYAS+L Sbjct: 158 VDSALNKWVEHGKELSRKEILLAVRELRRRKMYGRAFQLFQWLESNKKLEFMESDYASQL 217 Query: 1463 DLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLELQIT 1284 DLIAK+ GL KAE Y++ VPESFRGE+LYRTLLANC N E +FNKMK L+L +T Sbjct: 218 DLIAKLRGLPKAEKYIESVPESFRGELLYRTLLANCASQNNLIATEKIFNKMKDLDLPLT 277 Query: 1283 AFACNQXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKCVET 1104 AFACNQ KIADVL LME +N++ S FTYR+LID++GQ+NDI GME+ ET Sbjct: 278 AFACNQLLLLYKKLDKKKIADVLLLMEKENVKPSLFTYRILIDSKGQSNDIAGMEQVFET 337 Query: 1103 MKEDGFEPDIQTQGLLVRHYVTGGFTEKAEAILKKMEGANLKENRWACRILLPLYADLGM 924 MKE+GFEPDIQ Q LL RHY + G EKAEA+LK+MEG NLKEN+W C LL LYA+LG Sbjct: 338 MKEEGFEPDIQIQALLARHYTSSGLKEKAEAMLKEMEGENLKENQWVCATLLRLYANLGK 397 Query: 923 DKEVGRIWKICDPNPRVEECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTTLLK 744 EV RIWK+C+ PRVE+CLAA+EAWGK+ K+EEAEAVF+ +++ W KL+S+NY+ LLK Sbjct: 398 ADEVERIWKVCESKPRVEDCLAAVEAWGKLNKIEEAEAVFEMVSKKW-KLNSKNYSVLLK 456 Query: 743 VYANHKMLTKGKDLAKRMAESGQRLDAFTWDALVKLYVEAGEVEKADSILQKSSQQNQLK 564 +YAN+KMLTKGK+L K MA+SG R+ TWDALVKLY++AGEVEKADSIL K+ QQNQL+ Sbjct: 457 IYANNKMLTKGKELVKLMADSGVRIGPLTWDALVKLYIQAGEVEKADSILHKAIQQNQLQ 516 Query: 563 PMFSSYMYIMEQYAKRGDVHNAEKIFTRLKQSGYVGRLRQYTTLLDTYVNAKVPAYGFRD 384 PMF++Y+ I+EQYAKRGDVHN+EKIF +++Q+GY R+ Q+ L+ YVNAKVPAYG R+ Sbjct: 517 PMFTTYLAILEQYAKRGDVHNSEKIFLKMRQAGYTSRISQFQVLIQAYVNAKVPAYGIRE 576 Query: 383 RMKGDNIFPNKPMQAKLAKVDAFKKTAVSDILD 285 R+K DN+FPNK + +LA VDAF+K AVSD+LD Sbjct: 577 RIKADNLFPNKTLANQLALVDAFRKNAVSDLLD 609 >ref|XP_003624990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355500005|gb|AES81208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 623 Score = 620 bits (1599), Expect = e-175 Identities = 331/636 (52%), Positives = 436/636 (68%), Gaps = 14/636 (2%) Frame = -1 Query: 2150 MWALRRTINPFRGYHVGAFRACGVKLDTLTNDLDHAAETCNLTQFVPNGSLSVPKNFYES 1971 MWALRR R R VKL T+ D + + S Y S Sbjct: 1 MWALRRASLSLRNKSFNV-RVSSVKLLPNTSVEDESGVFDSPKMVCAKCGFSSMNLCYCS 59 Query: 1970 PSAVG----KLSFGSRGLSSQAGAESSGDEDN-LEDGFSELETPLSDVTEE-VTAEEDIE 1809 S G K S G G SS+AGA+++ +ED+ LEDGFSELETPL + +E+ V ++ + Sbjct: 60 GSNSGHGFLKFSLGRLGFSSEAGAKTTKEEDDDLEDGFSELETPLGEESEKGVVSDSEDS 119 Query: 1808 DLISEPELSGEDDILTEDPHDE------HDILDTKQGVSDGVPPKKAASSDLFKVISVAT 1647 D E E++G PH+E HD+ + G +K A S+LFK I T Sbjct: 120 DESDESEITG--------PHNELELPLSHDVDEVSTGKRSS---RKRADSELFKAIMNGT 168 Query: 1646 RFTLNDVLDKWLERGNTLNRNEISLVMLNLRKRRNYGKALQFSEWLEKKR--TFDERDYA 1473 T+ L+KW+E G L+R EISL M+NLR+R+ Y KALQ SEWLE K+ F ERDYA Sbjct: 169 GPTIYTALEKWVEDGKELSREEISLTMINLRRRKIYLKALQLSEWLESKKHLEFVERDYA 228 Query: 1472 SRLDLIAKVLGLYKAEAYVKDVPESFRGEVLYRTLLANCVVAGNKEKAEDVFNKMKKLEL 1293 S+LDLIAK+ GL+KAE Y++ +PESFRGE++YRTLLANCV N +KAE++FNKMK LE Sbjct: 229 SQLDLIAKLHGLHKAEVYIEKIPESFRGEIIYRTLLANCVTQNNLKKAEEIFNKMKDLEF 288 Query: 1292 QITAFACNQXXXXXXXXXXXKIADVLKLMELQNIRLSAFTYRLLIDARGQANDIEGMEKC 1113 +T FACNQ KIADVL LME +N++ S T+++LID +GQ+NDI+GM++ Sbjct: 289 PLTPFACNQLLLLYKRTDKKKIADVLLLMEQENVKPSPLTFKILIDVKGQSNDIDGMDQI 348 Query: 1112 VETMKEDGFEPDIQTQGLLVRHYVTGGFTEKAEAILKKMEGANLKENRWACRILLPLYAD 933 V+ M+ +G EPD T+ +LV HY++GG +KA+ +LK+MEG NLKENRW CR+LL LYA Sbjct: 349 VDQMRAEGIEPDNYTKAVLVGHYISGGHDDKAKMLLKEMEGENLKENRWVCRLLLALYAK 408 Query: 932 LGMDKEVGRIWKICDPNPRVEECLAAIEAWGKVGKVEEAEAVFDRMTQTWKKLSSRNYTT 753 LGM EVGR+WK+C+ P VE+C+AAIEAWGK+ K++EAEAVF+ M + W KL+S+N + Sbjct: 409 LGMADEVGRVWKVCETRPSVEDCVAAIEAWGKLKKIDEAEAVFEVMARKW-KLTSKNCSV 467 Query: 752 LLKVYANHKMLTKGKDLAKRMAESGQRLDAFTWDALVKLYVEAGEVEKADSILQKSSQQN 573 LL VYAN+KMLTKGKDL KRMA G R+ TW+ALVKLYV+AGEVEKADS+LQK+ QQ+ Sbjct: 468 LLNVYANNKMLTKGKDLIKRMAHKGCRIGPLTWNALVKLYVQAGEVEKADSVLQKAIQQS 527 Query: 572 QLKPMFSSYMYIMEQYAKRGDVHNAEKIFTRLKQSGYVGRLRQYTTLLDTYVNAKVPAYG 393 ++P+FSSY ++E+Y+KRGD+HN+EKIF R+KQ+GY+ RL+QY L++ Y A VPAYG Sbjct: 528 PVRPIFSSYNTLLEEYSKRGDIHNSEKIFYRMKQAGYISRLKQYQILIEAYRRANVPAYG 587 Query: 392 FRDRMKGDNIFPNKPMQAKLAKVDAFKKTAVSDILD 285 RDR+K DN+FPNK + L +VD FKKT SD+LD Sbjct: 588 IRDRLKADNVFPNKTLANLLVQVDGFKKTQASDLLD 623