BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001402
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...   242   2e-61
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...   229   1e-57
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   229   1e-57
ref|XP_003525647.1| PREDICTED: transcription initiation factor T...   208   3e-51
ref|XP_004165443.1| PREDICTED: transcription initiation factor T...   204   5e-50

>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
            predicted protein [Populus trichocarpa]
          Length = 1359

 Score =  242 bits (618), Expect = 2e-61
 Identities = 173/479 (36%), Positives = 232/479 (48%), Gaps = 36/479 (7%)
 Frame = +2

Query: 2    GQVKLSLHAMRLCQIKGEDD----IKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILS 169
            GQ KL  HAMRLCQI+ E D    IK +T        EG   FNN +LRHHLFC+ QIL+
Sbjct: 923  GQAKLGAHAMRLCQIQDESDSEDAIKCTTLLALIRLLEGHIGFNNTILRHHLFCILQILA 982

Query: 170  GRPSTLYGIPRTQVQPSGETKTCSEQIKAAFLKLKISRPSEP------LGDAQNPLPDAL 331
            GR +TLYGIPR +    G+++TCS+        +  ++P EP      L       P+A+
Sbjct: 983  GRAATLYGIPRDRTLCIGDSETCSDPRNIFAGLVTETKPLEPPMEIPKLAQDNFAFPEAI 1042

Query: 332  P----------------IPEDSKEAIPIPEASKEAD---------TVSNGSERKRAVLKI 436
                             IPE++ E + +PEASKE D          +SN  ER+R V+KI
Sbjct: 1043 KEADIISNKDQHKMDMAIPEEASEEVAVPEASKETDIPVASKEEDNISNSHERRRPVVKI 1102

Query: 437  KVKQXXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRLTSEPLNADCQIIEEV 616
            +VK               V  S G   E +RG SSS+SVDAP R+++E ++   Q +EEV
Sbjct: 1103 RVKHSAASSRAEETDIQNVERSQGGHHETDRGASSSVSVDAPQRISTEAVSISYQNLEEV 1162

Query: 617  NSCHDRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPEDRSSPNIIKGNDVG 796
            NSC D  SR++ASIGS K  ++ D    ELQCTA+SS V    QP+D SSP +++ N V 
Sbjct: 1163 NSCLDHGSRMSASIGSAKLASDGDNFGKELQCTAESSKVSMHPQPDDPSSPRVMQDNLVD 1222

Query: 797  PETQKYSSLQTLSVGR-NDHGAQSLGLEDPNFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 973
             + Q+++SLQTLSV R N  G +    +D                               
Sbjct: 1223 TDAQRFASLQTLSVERVNPDGKEKEKKKDKE------------------KKRKREDHKGH 1264

Query: 974  XXXPEYXXXXXXXXXXXXXXXXXXXXQSGNAKLSSTALQSTSFESGGEFALQTRDLRASF 1153
               PEY                     SG AK       +TS E  G+            
Sbjct: 1265 RDDPEYLERKLLKKEKKRKEKEMTKLLSGGAK-------ATSVELPGK------------ 1305

Query: 1154 VGQCTNEEPRVKPAPVELKPNEPGNSEVVSKPLETKGDGLEGSSSVRKIRLKIKDRNLN 1330
                 NE+P +K A V LKPN+P  S+ V+  +ETK +  EG +SV K R+KIK+R LN
Sbjct: 1306 -----NEKPTIKLATVPLKPNQPSESKAVATNIETKPEPSEG-TSVPKFRIKIKNRTLN 1358


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 1 [Vitis vinifera]
          Length = 1325

 Score =  229 bits (584), Expect = 1e-57
 Identities = 173/460 (37%), Positives = 228/460 (49%), Gaps = 19/460 (4%)
 Frame = +2

Query: 2    GQVKLSLHAMRLCQIKG----EDDIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILS 169
            GQVKL +HAMRLCQIKG    ++DIK+ST        E R AFNNV LRHHLFC+ +IL+
Sbjct: 908  GQVKLGVHAMRLCQIKGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILA 967

Query: 170  GRPSTLYGIPRTQVQPSGETKTCSEQIKAAFLKLKISRPSEPLGDAQNPLPDALPIPEDS 349
            GR  TLYG+PR Q+      + CSEQ       +K ++  EP  D           P  S
Sbjct: 968  GRLPTLYGVPRDQIPQMDPAEICSEQKNGFITIVKETKSLEPPVDT----------PNVS 1017

Query: 350  KEAIPIPEASKEADTVSNGSERKRAVLKIKVKQXXXXXXXXXXXKVVVNISDGVQDEAER 529
             + + +PEAS+EADTVSN  ERK  V+KI+V+Q              V+ S G  +E +R
Sbjct: 1018 HDGLALPEASREADTVSNSHERKMPVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDR 1077

Query: 530  GGSSSMSVDAPVRLTSEPLNADCQIIEEVNSCHDRDSRITASIGSVKPVNNLDENRNELQ 709
            GGSSS+SVDAP R  +E ++   Q +EEVNSCHDR S++TASIGS K  ++ DE   ELQ
Sbjct: 1078 GGSSSISVDAPQRNFTEAVSISNQNLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQ 1137

Query: 710  CTADSSTVDCQLQPEDRS---------SPNIIKGNDVGPETQKYSSLQTLSVGRNDHGAQ 862
            CTADS  +   L P D               I+ N V  + QKY+SLQTLSV R++  A+
Sbjct: 1138 CTADSGKISV-LPPSDEGPLFSGIQDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEAK 1196

Query: 863  SLGLEDPNFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEYXXXXXXXXXXXXXXXXX 1042
                ++                                  PEY                 
Sbjct: 1197 EKKEKEKK---------------------------RKREDPEYLERKRLKKEKKQKEKEM 1229

Query: 1043 XXXQSGNAKLS----STALQSTSFESGGEFA-LQTRDLRASFVGQCTNE-EPRVKPAPVE 1204
                SG AK      S  L   + +   E   L + D +AS V     + E  +K A V+
Sbjct: 1230 AQLLSGEAKQKEKEMSELLSGEAKQKEKEMTELLSGDAKASSVELGVKKVESGIKLATVQ 1289

Query: 1205 LKPNEPGNSEVVSKPLETKGDGLEGSSSVRKIRLKIKDRN 1324
             K +E      VSK + TK +  EGSS+  K R+KIK+R+
Sbjct: 1290 YKASESS----VSKIVTTKVEASEGSSA-PKFRIKIKNRS 1324


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  229 bits (584), Expect = 1e-57
 Identities = 173/460 (37%), Positives = 228/460 (49%), Gaps = 19/460 (4%)
 Frame = +2

Query: 2    GQVKLSLHAMRLCQIKG----EDDIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILS 169
            GQVKL +HAMRLCQIKG    ++DIK+ST        E R AFNNV LRHHLFC+ +IL+
Sbjct: 928  GQVKLGVHAMRLCQIKGGSESDNDIKSSTLVALLRLLESRIAFNNVFLRHHLFCILRILA 987

Query: 170  GRPSTLYGIPRTQVQPSGETKTCSEQIKAAFLKLKISRPSEPLGDAQNPLPDALPIPEDS 349
            GR  TLYG+PR Q+      + CSEQ       +K ++  EP  D           P  S
Sbjct: 988  GRLPTLYGVPRDQIPQMDPAEICSEQKNGFITIVKETKSLEPPVDT----------PNVS 1037

Query: 350  KEAIPIPEASKEADTVSNGSERKRAVLKIKVKQXXXXXXXXXXXKVVVNISDGVQDEAER 529
             + + +PEAS+EADTVSN  ERK  V+KI+V+Q              V+ S G  +E +R
Sbjct: 1038 HDGLALPEASREADTVSNSHERKMPVVKIRVRQSAASSRAEEADNPTVDKSQGGHNEIDR 1097

Query: 530  GGSSSMSVDAPVRLTSEPLNADCQIIEEVNSCHDRDSRITASIGSVKPVNNLDENRNELQ 709
            GGSSS+SVDAP R  +E ++   Q +EEVNSCHDR S++TASIGS K  ++ DE   ELQ
Sbjct: 1098 GGSSSISVDAPQRNFTEAVSISNQNLEEVNSCHDRGSQMTASIGSAKLASDGDEVGKELQ 1157

Query: 710  CTADSSTVDCQLQPEDRS---------SPNIIKGNDVGPETQKYSSLQTLSVGRNDHGAQ 862
            CTADS  +   L P D               I+ N V  + QKY+SLQTLSV R++  A+
Sbjct: 1158 CTADSGKISV-LPPSDEGPLFSGIQDIQGGSIQDNIVDVDAQKYASLQTLSVMRHEVEAK 1216

Query: 863  SLGLEDPNFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEYXXXXXXXXXXXXXXXXX 1042
                ++                                  PEY                 
Sbjct: 1217 EKKEKEKK---------------------------RKREDPEYLERKRLKKEKKQKEKEM 1249

Query: 1043 XXXQSGNAKLS----STALQSTSFESGGEFA-LQTRDLRASFVGQCTNE-EPRVKPAPVE 1204
                SG AK      S  L   + +   E   L + D +AS V     + E  +K A V+
Sbjct: 1250 AQLLSGEAKQKEKEMSELLSGEAKQKEKEMTELLSGDAKASSVELGVKKVESGIKLATVQ 1309

Query: 1205 LKPNEPGNSEVVSKPLETKGDGLEGSSSVRKIRLKIKDRN 1324
             K +E      VSK + TK +  EGSS+  K R+KIK+R+
Sbjct: 1310 YKASESS----VSKIVTTKVEASEGSSA-PKFRIKIKNRS 1344


>ref|XP_003525647.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            [Glycine max]
          Length = 1388

 Score =  208 bits (530), Expect = 3e-51
 Identities = 173/493 (35%), Positives = 226/493 (45%), Gaps = 49/493 (9%)
 Frame = +2

Query: 2    GQVKLSLHAMRLCQIK----GEDDIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILS 169
            GQ+KL+ H MRLCQ++      D+I + T        EGR AFNNV LRH+LFC+ QIL+
Sbjct: 929  GQLKLATHVMRLCQMRDGLNSNDEITSQTLVSMLNLLEGRIAFNNVSLRHYLFCILQILA 988

Query: 170  GRPSTLYGIPR-TQVQPSGETKTCSEQIKAAFLKLKISRP-----------------SEP 295
             RP TL+GIPR  ++      + C+ Q K  F     S+P                  E 
Sbjct: 989  RRPPTLHGIPRGNRMLHMSLAEACNYQ-KNIFALDSESKPLDLPSSTKNLTQNLGPTMEG 1047

Query: 296  LGDAQNPLPDALP--------------------------IPEDSKEAIPIP-EASKEADT 394
            L DA +  P   P                           P+++    P P E SKE DT
Sbjct: 1048 LRDAVDEAPKDQPCEASTQVHLEALKEASLEKPKEVFTEFPQEAPIEAPNPNEVSKEVDT 1107

Query: 395  VSNGSERKRAVLKIKVKQXXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRLT 574
            VSN  ERKR + KIKVKQ           +VV   S G ++E + G SSS+SVDAP R  
Sbjct: 1108 VSNSHERKRPI-KIKVKQSSATSRADTDNQVV-ECSLGGRNEMDHGASSSVSVDAPQRNF 1165

Query: 575  SEPLNADCQIIEEVNSCHDRDSRITASIGSVKPVNNLDENRNELQCTADSSTVDCQLQPE 754
            +E ++     I+EVNS HDR SR+TASIGS K +++ DE   ELQCTADSS V  Q QPE
Sbjct: 1166 AETVSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPE 1225

Query: 755  DRSSPNIIKGNDVGPETQKYSSLQTLSVGRNDHGAQSLGLEDPNFCXXXXXXXXXXXXXX 934
            D SS +II+ N++  + ++Y+SLQTLSV R D   +SLG E                   
Sbjct: 1226 DPSSSSIIQDNNIDADARRYASLQTLSVARFDPDGESLGKE--------ISARGKEKHKS 1277

Query: 935  XXXXXXXXXXXXXXXXPEYXXXXXXXXXXXXXXXXXXXXQSGNAKLSSTALQSTSFESGG 1114
                             EY                    QS  AK SS  L S   E   
Sbjct: 1278 KEKKRKQESNKGHHDDVEYLERKRLKKEKKHREKELAKLQSDEAKRSSIDLSSKKVEPVV 1337

Query: 1115 EFALQTRDLRASFVGQCTNEEPRVKPAPVELKPNEPGNSEVVSKPLETKGDGLEGSSSVR 1294
            + A Q + +  S                         NS+V  K ++TK +  EG+S   
Sbjct: 1338 DVARQVKSVEPSGY-----------------------NSKVEIKKIDTKPEPSEGTSGAP 1374

Query: 1295 KIRLKIKDRNLNK 1333
            KIR+KIK+R L+K
Sbjct: 1375 KIRIKIKNRMLSK 1387


>ref|XP_004165443.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            [Cucumis sativus]
          Length = 1362

 Score =  204 bits (519), Expect = 5e-50
 Identities = 134/323 (41%), Positives = 172/323 (53%), Gaps = 35/323 (10%)
 Frame = +2

Query: 2    GQVKLSLHAMRLCQIK----GEDDIKASTXXXXXXXXEGRKAFNNVLLRHHLFCLFQILS 169
            GQVKL++H MRLCQI       D +   T        EG  AFNNV LRH+LFC+ Q+LS
Sbjct: 918  GQVKLAVHVMRLCQIMRRSGSNDVVNNDTLVALLLLLEGNMAFNNVYLRHYLFCILQVLS 977

Query: 170  GRPSTLYGIPRT-QVQPSGETKTCSEQIKAAFLKLKISRPSEPLG--------------- 301
            GR  TLYG+PR  +    G+T T SEQ +     +    P EP                 
Sbjct: 978  GRSPTLYGVPREYKTLHMGDTGTFSEQKRMLTSLIPEFNPPEPSSVSAVAPMPCIPATLS 1037

Query: 302  ----DAQNPLPDALPIPE----------DSKEAIPIPEASKEADTVSNGSERKRAVLKIK 439
                    P PD L +PE          D K+A+ I EA +EA +VS+  ERK  V+KIK
Sbjct: 1038 SEPLHVPTPRPDNLAVPELSKEEGAIAEDPKQAMAIVEAPREAASVSSSHERKLPVVKIK 1097

Query: 440  VKQXXXXXXXXXXXKVVVNISDGVQDEAERGGSSSMSVDAPVRLTSEPLNADCQIIEEVN 619
            V+             +    S     E + G SSS+SVDAP R T+E  +   +I+EEVN
Sbjct: 1098 VRSSAATSRADAD-NLTTERSHAAPRETDVGPSSSVSVDAPPRNTAEATSISNRILEEVN 1156

Query: 620  SCHDRDSRITASIGSVKPVNNLDENRNELQCTADSST-VDCQLQPEDRSSPNIIKGNDVG 796
            SCHD  S +TASIGS K  +  DE   E QCTADSS+      QPED SS +II+ N++ 
Sbjct: 1157 SCHDHGSHMTASIGSAKLASYGDELGKEFQCTADSSSRAFGHFQPEDPSSSSIIQDNNID 1216

Query: 797  PETQKYSSLQTLSVGRNDHGAQS 865
             + QKY+SLQTLS+ ++DHG  S
Sbjct: 1217 ADAQKYASLQTLSLPQHDHGLAS 1239